CEP41 (centrosomal protein 41) - Rat Genome Database

Name: CEP41
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: CEP41 (centrosomal protein 41) Pan paniscus

Analyze

Symbol:

CEP41

Name:

centrosomal protein 41

RGD ID:

11814361

Description:

INVOLVED IN cell projection organization (inferred); cilium assembly (inferred); protein transport (inferred); ASSOCIATED WITH acrocallosal syndrome (ortholog); autism spectrum disorder (ortholog); genetic disease (ortholog); FOUND IN cell projection (inferred); centriole (inferred); centrosome (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

centrosomal protein of 41 kDa

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	CEP41 (centrosomal protein 41)	NCBI	Ortholog
Mus musculus (house mouse):	Cep41 (centrosomal protein 41)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Cep41 (centrosomal protein 41)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Cep41 (centrosomal protein 41)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	CEP41 (centrosomal protein 41)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Cep41 (centrosomal protein 41)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	CEP41 (centrosomal protein 41)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	CEP41 (centrosomal protein 41)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Cep41 (centrosomal protein 41)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly

Position:

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	6	167,216,392 - 167,261,023 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	7	19,228,926 - 19,271,267 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	7	122,360,248 - 122,406,260 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	7	134,880,086 - 134,924,657 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	7	134,880,086 - 134,924,657 (-)	Ensembl	panpan1.1		panPan2

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

acrocallosal syndrome (ISO)

autism spectrum disorder (ISO)

genetic disease (ISO)

Joubert syndrome 1 (ISO)

Joubert syndrome 15 (ISO)

Joubert syndrome 9 (ISO)

pleomorphic xanthoastrocytoma (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cell projection organization (IEA)

cilium assembly (IEA)

protein transport (IEA)

Cellular Component

cell projection (IEA)

centriole (IEA)

centrosome (IEA)

ciliary basal body (IEA)

cilium (IEA)

cytoplasm (IEA)

cytoskeleton (IEA)

Molecular Function

protein binding (ISO)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

CEP41
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	6	167,216,392 - 167,261,023 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	7	19,228,926 - 19,271,267 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	7	122,360,248 - 122,406,260 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	7	134,880,086 - 134,924,657 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	7	134,880,086 - 134,924,657 (-)	Ensembl	panpan1.1		panPan2

CEP41
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	7	130,393,771 - 130,441,741 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	7	130,393,771 - 130,442,433 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	7	130,033,612 - 130,080,857 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	7	129,823,611 - 129,868,090 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	7	129,630,325 - 129,674,805	NCBI
Celera	7	124,832,140 - 124,876,628 (-)	NCBI		Celera
Cytogenetic Map	7	q32.2	NCBI
HuRef	7	124,395,665 - 124,443,117 (-)	NCBI		HuRef
CHM1_1	7	129,967,019 - 130,014,473 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	7	131,707,487 - 131,755,472 (-)	NCBI		T2T-CHM13v2.0
CRA_TCAGchr7v2	7	129,418,996 - 129,466,457 (-)	NCBI

Cep41
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	6	30,653,456 - 30,710,511 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	6	30,653,456 - 30,693,748 (-)	Ensembl		GRCm39 Ensembl
GRCm38	6	30,653,457 - 30,710,517 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	6	30,653,457 - 30,693,749 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	6	30,603,457 - 30,643,682 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	6	30,603,467 - 30,643,692 (-)	NCBI		MGSCv36	mm8
Celera	6	30,663,302 - 30,703,608 (-)	NCBI		Celera
Cytogenetic Map	6	A3.3	NCBI
cM Map	6	12.52	NCBI

Cep41
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	4	60,238,602 - 60,279,670 (-)	NCBI		GRCr8
mRatBN7.2	4	59,271,218 - 59,312,343 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	4	59,271,218 - 59,310,668 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	4	64,250,110 - 64,264,961 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	4	60,166,298 - 60,181,147 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	4	58,568,224 - 58,583,073 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	4	57,966,783 - 58,006,931 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	4	57,966,783 - 58,006,839 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	4	57,727,700 - 57,767,027 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	4	57,564,301 - 57,579,461 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	4	54,370,995 - 54,385,904 (-)	NCBI		Celera
Cytogenetic Map	4	q22	NCBI

Cep41
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955479	11,025,320 - 11,070,964 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955479	11,025,320 - 11,071,256 (-)	NCBI	ChiLan1.0	ChiLan1.0

CEP41
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	14	6,502,713 - 6,554,973 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	14	6,502,926 - 6,552,789 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	14	6,192,664 - 6,247,954 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	14	6,266,929 - 6,322,275 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	14	6,266,355 - 6,319,183 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	14	6,471,962 - 6,527,257 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	14	6,217,185 - 6,272,468 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	14	6,360,779 - 6,416,088 (+)	NCBI		UU_Cfam_GSD_1.0

Cep41
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	24,713,251 - 24,757,455 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936579	4,846,966 - 4,887,768 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936579	4,847,137 - 4,890,478 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CEP41
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	18	18,415,562 - 18,462,575 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	18	18,416,170 - 18,462,579 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	18	19,421,466 - 19,466,654 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CEP41
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	21	99,027,826 - 99,078,666 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	21	99,031,953 - 99,078,641 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666042	4,322,429 - 4,374,569 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Cep41
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624783	5,859,739 - 5,905,196 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624783	5,859,800 - 5,906,496 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_003813474	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_003813475	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008966026	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008966028	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034964990	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_055114875	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JARIFH020000006	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSPPAT00000032178 ⟹ ENSPPAP00000009535

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	7	134,880,086 - 134,924,657 (-)	Ensembl

RefSeq Acc Id:

ENSPPAT00000032179 ⟹ ENSPPAP00000009536

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	7	134,880,104 - 134,924,657 (-)	Ensembl

RefSeq Acc Id:

ENSPPAT00000032180 ⟹ ENSPPAP00000009537

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	7	134,882,435 - 134,924,413 (-)	Ensembl

RefSeq Acc Id:

ENSPPAT00000032181 ⟹ ENSPPAP00000009538

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	7	134,882,435 - 134,913,150 (-)	Ensembl

RefSeq Acc Id:

ENSPPAT00000032183 ⟹ ENSPPAP00000009540

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	7	134,904,822 - 134,924,657 (-)	Ensembl

RefSeq Acc Id:

XM_003813474 ⟹ XP_003813522

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	6	167,216,392 - 167,261,023 (-)	NCBI
NHGRI_mPanPan1	7	19,228,926 - 19,271,267 (-)	NCBI
Mhudiblu_PPA_v0	7	122,360,248 - 122,406,249 (-)	NCBI
PanPan1.1	7	134,880,104 - 134,924,657 (-)	NCBI

Sequence:

show sequence

AGAGCACAAAAGGCCTCGCTAGCCGGCGTCCCGCGTTGCCCTTGGCAACCATTGAGCGGCGTCT
CGCCCTTCTGCGACCCTGAGATGAGAGAGTAAACGGGGCCCCCATTGGCCGGCCGGGGAAGACG
GGCCAATCGGAGAAGAGGGTATAGGGAGGCGGCTGAACAAGGTTGTGGGGGTAGGAAGCTAGGG
TTAGAGGCAACCCGTGAGGCTAGAACCCCGAACGTGGTCGGTTGGAGCAAATATGTCCCTCCGG
AGGCACATTGGGAACCCTGAGTATCTGATGAAAAGGATACCACAGAACCCAAGATACCAGCATA
TCAAATCAAGACTGGACACTGGTAACAGTATGACTAAATATACTGAGAAGCTCGAAGAGATTAA
GAAAAATTATAGATACAAAAAAGATGAGCTTTTCAAGAGACTAAAAGTTACAACTTTTGCCCAG
CTGATCATCCAAGTTGCTTCCCTCTCTGATCAAACACTGGAAGTGACAGCTGAGGAGATTCAAA
GGCTGGAAGACAATGATTCTGCAGCTTCAGACCCTGATGCTGAAACCACTGCCAGGACCAATGG
GAAAGGAAATCCAGGTGAGCAGTCGCCGAGCCCTGAGCAGTTCATAAACAACGCAGGAGCAGGG
GACTCCAGCCGCTCAACTCTTCAGAGTGTCATCAGTGGTGTTGGGGAACTGGATCTAGACAAAG
GGCCAGTGAAGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTGACTGCCCCTTCCTGCT
GCTAGATGTGCGTGATAGAGATTCTTACCAGCAGTGCCACATTGTTGGAGCTTACAGTTACCCA
ATTGCAACTCTGTCTAGAACAATGAACCCTTATTCAAATGATATTCTTGAATATAAAAATGCCC
ATGGCAAGATCATCATTCTGTATGACGATGATGAAAGGCTGGCCAGTCAGGCGGCCACCACCAT
GTGCGAGCGTGGATTTGAAAACCTCTTCATGCTTTCCGGAGGTCTAAAAGTCTTAGCTCAGAAA
TTTCCGGAAGGACTGATTACTGGTTCCCTGCCAGCATCTTGCCAGCAGGCCCTTCCTCCTGGGT
CTGCCCGGAAACGATCCAGCCCCAAAGGGCCACCCCTACCAGCTGAGAATAAATGGAGATTTAC
CCCAGAAGACTTAAAAAAGATAGAATATTATCTGGAAGAGGAGCAAGGGCCTGCAGATCATCCT
AGCCGACTGAACCAAGTTAACTCCTCCGGAAGAGAGTCCAAGGTGCCTGGTGCCCGAAGCGCTC
AGAATCTGCCAGGTGGTGGCCCCGCCAGCCACTCAAACCCCCGCTCCCTCAGCAGTGGCCACCT
GCAAGGCAAACCCTGGAAGTAAAGACTTTGTCTCACTTAGGCAAATAAATGTTTTTCCTCTTTT
CAGAACCCCTGAGCATTTCCCAAGTTGGGTCATTTCCAGAAACTTCTGCAGAGGAAAAACCATG
ACATACGTATGGGATAGGCCCTCTTCCCTCTCCGTGTCTCCAGTTCCTCTCCCCTCGGGAAGGA
TTTTGACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTACA
GCATATTTAAGTCTTGTGAAACTGTATAGGAAAAAAGTATCTACGTTTTTAAGTTTTTTTTTTT
TTTTTCCAATAAGGTCCAGCTTGTTGGGTCTCTCTTTGTTGTTTTGTAAATATTTCAGTCACAT
CTGCCTGCGTGCCTGTCCCACCCGCCTTTTCGTTCACTGTTCTTGACTTCATGAAGGCTTCTCT
GGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTG
CAGACCCACCCCAGCAGGCTCACTCAGCAAGGAGCTCTCTGCCCAGCATATTGCAGGCCCTGTT
TTGAGTATGGAAGCCAGTGCCTGTGTACTCACTGAAATTGAAGATGAGGAGAGTAGCTGTACAC
TCACTGAATGCTCCCCCTTATTAGATATTTTCCTGGAGCCAGAAAGGTGTGCATGTGGGTGTCT
TCACACCAGGGAGGAGGGCCTCTCATGGGAAAGCCCTGGCCACCACACCGGCCTGTGTCCCTTG
AAGCCCACCAAAGCGGCCCTCACTTGTGGTCAGTATATCAGTTATGACTCCCATTGCCCAGCTT
CAGTCCATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTTCAGTTGGACA
ACTGTGGACACACAAGGTGAAGAGGACTCCGAAGTCCTTTGTCAGGGCTGACAACCTCGTAAGC
CCTTGCTTAGAAATACAGTATTAGTCTAATTGAGTAATTAGTGCAATTTCCTGCTTACTTTTCA
TTCTCATGACTGAACTGTGATTAGGAAGTTGTGATTATAGATTCTGGTTTTGGCCGGAATTTTG
AATCAGCATTAATTGAATTGCTAAATGACTGACATTCATTCCATTTAATTGGGGGAACAAAAGG
CCTCAGGTAAGGATGAGGAACTCTGAAATCAGATGGAAAAGAGCGGTGTTAATTTTTATGGTCT
GTGATCGTAGCTGTGATAAGGGACTGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTC
TGAAAAGCCAACTGAAAATTGCCTGTCCTGCTGGTAACTGCTACGGGGTAAGATTTGCCTTAAC
AGTACTATTTTCTCGCCACCAAAAAAAAAAAAAAAATGCACCACAGTATTTCTAGCATGGGGGC
TGTGTTTGTATGAGAAATAAACGTAATAAATATCTCATAGAGACATATGGAAAAATAACTTTCA
GATTCAGCCCAGTTCTGTTTTAGAGTGTGTTTATTCTTCTCTACTTGATTTCCAAAGTGCAACA
TTTTCCGATGCTTTAGAAATCAAACAAACCAGGGACATTGTTCAGATGTCAAGCCATGCCCAAT
TTTCCACAAGATTCAAGAATCTTGTATAAAATTCAGCCAACGTACACATAGCTTTAATGAGGAG
CCTGTCATGTTTCCCCATAAATTTATTGCCTGAGAACTTAGTTCAGCCTTTGCTAATGCCAAAA
TGCTCTGGCTTTGTATTTTCTTTACAGCATAGATAGAAAAATGCACATTTTTCCACACTCAGCT
TTCCCCTAGCATGGACAAGATTTTCAGCCATTTTTGCCACATATACATTTTTAAGGAAAAAATA
TTTTTCTCTGTAACAAAGTTCTGGTTACACCGTTTTAAAGGTGACTTGTCAGGAGTTGAGACTT
CCCTGCCGGATTCTATTTTGAAAGTAAATGGTCTTCCCTCCTTGTTCCGATTCTGCGTTCCCAT
CGTCAGACAACTTTGAAGTATTAGAAACCACTGTATATATGTGGAAAGCAAGGTCAGCCAGACC
TGTTAGAATTGGTGTGCACTCACCTGAGAGATCTGGCAGGTTGAATATATTTATGTGTATTTCT
CCACAGTGCTTGCTTTGCCCTGTTGGTAAGGATTTTAAATAACCATGCTCAAAAGAGCTGTTCT
AATCTGCGTTTTGCATGTTAAGTGTTAATATCAAACATTCTTTACGTGCTCGAGGTATTGCTTT
TAACATTCTACTTTGCCAGTTTCTTCATTAGATTAATTGACATGTATTATTTAAATGACCAGTG
ATGCTTTGTGCAATTATGAATGTTGAAGATTAAAGTACATAGTTACTAA

hide sequence

RefSeq Acc Id:

XM_003813475 ⟹ XP_003813523

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	6	167,216,392 - 167,261,023 (-)	NCBI
NHGRI_mPanPan1	7	19,228,926 - 19,271,244 (-)	NCBI
Mhudiblu_PPA_v0	7	122,360,248 - 122,406,255 (-)	NCBI
PanPan1.1	7	134,880,086 - 134,924,657 (-)	NCBI

Sequence:

show sequence

AGAGCACAAAAGGCCTCGCTAGCCGGCGTCCCGCGTTGCCCTTGGCAACCATTGAGCGGCGTCT
CGCCCTTCTGCGACCCTGAGATGAGAGAGTAAACGGGGCCCCCATTGGCCGGCCGGGGAAGACG
GGCCAATCGGAGAAGAGGGTATAGGGAGGCGGCTGAACAAGGTTGTGGGGGTAGGAAGCTAGGG
TTAGAGGCAACCCGTGAGGCTAGAACCCCGAACGTGGTCGGTTGGAGCAAATATGTCCCTCCGG
AGGCACATTGGGAACCCTGAGTATCTGATGAAAAGGATACCACAGAACCCAAGATACCAGCATA
TCAAATCAAGACTGGACACTGGTAACAGTATGACTAAATATACTGAGAAGCTCGAAGAGATTAA
GAAAAATTATAGATACAAAAAAGATGAGCTTTTCAAGAGACTAAAAGTTACAACTTTTGCCCAG
CTGATCATCCAAGTTGCTTCCCTCTCTGATCAAACACTGGAAGTGACAGCTGAGGAGATTCAAA
GGCTGGAAGACAATGATTCTGCAGCTTCAGACCCTGATGCTGAAACCACTGCCAGGACCAATGG
GAAAGGAAATCCAGGTGAGCAGTCGCCGAGCCCTGAGCAGTTCATAAACAACGCAGGAGCAGGG
GACTCCAGCCGCTCAACTCTTCAGAGTGTCATCAGTGGTGTTGGGGAACTGGATCTAGACAAAG
GGCCAGTGAAGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTGACTGCCCCTTCCTGCT
GCTAGATGTGCGTGATAGAGATTCTTACCAGCAGTGCCACATTGTTGGAGCTTACAGTTACCCA
ATTGCAACTCTGTCTAGAACAATGAACCCTTATTCAAATGATATTCTTGAATATAAAAATGCCC
ATGGCAAGATCATCATTCTGTATGACGATGATGAAAGGCTGGCCAGTCAGGCGGCCACCACCAT
GTGCGAGCGTGGATTTGAAAACCTCTTCATGCTTTCCGGAGGCCGACTGAACCAAGTTAACTCC
TCCGGAAGAGAGTCCAAGGTGCCTGGTGCCCGAAGCGCTCAGAATCTGCCAGGTGGTGGCCCCG
CCAGCCACTCAAACCCCCGCTCCCTCAGCAGTGGCCACCTGCAAGGCAAACCCTGGAAGTAAAG
ACTTTGTCTCACTTAGGCAAATAAATGTTTTTCCTCTTTTCAGAACCCCTGAGCATTTCCCAAG
TTGGGTCATTTCCAGAAACTTCTGCAGAGGAAAAACCATGACATACGTATGGGATAGGCCCTCT
TCCCTCTCCGTGTCTCCAGTTCCTCTCCCCTCGGGAAGGATTTTGACAGGTGACCATAAAAACC
AGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTACAGCATATTTAAGTCTTGTGAAACTG
TATAGGAAAAAAGTATCTACGTTTTTAAGTTTTTTTTTTTTTTTTCCAATAAGGTCCAGCTTGT
TGGGTCTCTCTTTGTTGTTTTGTAAATATTTCAGTCACATCTGCCTGCGTGCCTGTCCCACCCG
CCTTTTCGTTCACTGTTCTTGACTTCATGAAGGCTTCTCTGGGCAGTCTTGGTGTGAGAAGCTG
TTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCCACCCCAGCAGGCTCACT
CAGCAAGGAGCTCTCTGCCCAGCATATTGCAGGCCCTGTTTTGAGTATGGAAGCCAGTGCCTGT
GTACTCACTGAAATTGAAGATGAGGAGAGTAGCTGTACACTCACTGAATGCTCCCCCTTATTAG
ATATTTTCCTGGAGCCAGAAAGGTGTGCATGTGGGTGTCTTCACACCAGGGAGGAGGGCCTCTC
ATGGGAAAGCCCTGGCCACCACACCGGCCTGTGTCCCTTGAAGCCCACCAAAGCGGCCCTCACT
TGTGGTCAGTATATCAGTTATGACTCCCATTGCCCAGCTTCAGTCCATCCATGTTAGATGGACA
GAAATTATGGCCAGTTGAAAATACCAGCTTCAGTTGGACAACTGTGGACACACAAGGTGAAGAG
GACTCCGAAGTCCTTTGTCAGGGCTGACAACCTCGTAAGCCCTTGCTTAGAAATACAGTATTAG
TCTAATTGAGTAATTAGTGCAATTTCCTGCTTACTTTTCATTCTCATGACTGAACTGTGATTAG
GAAGTTGTGATTATAGATTCTGGTTTTGGCCGGAATTTTGAATCAGCATTAATTGAATTGCTAA
ATGACTGACATTCATTCCATTTAATTGGGGGAACAAAAGGCCTCAGGTAAGGATGAGGAACTCT
GAAATCAGATGGAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCGTAGCTGTGATAAGGGAC
TGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGCCAACTGAAAATTGCCT
GTCCTGCTGGTAACTGCTACGGGGTAAGATTTGCCTTAACAGTACTATTTTCTCGCCACCAAAA
AAAAAAAAAAAATGCACCACAGTATTTCTAGCATGGGGGCTGTGTTTGTATGAGAAATAAACGT
AATAAATATCTCATAGAGACATATGGAAAAATAACTTTCAGATTCAGCCCAGTTCTGTTTTAGA
GTGTGTTTATTCTTCTCTACTTGATTTCCAAAGTGCAACATTTTCCGATGCTTTAGAAATCAAA
CAAACCAGGGACATTGTTCAGATGTCAAGCCATGCCCAATTTTCCACAAGATTCAAGAATCTTG
TATAAAATTCAGCCAACGTACACATAGCTTTAATGAGGAGCCTGTCATGTTTCCCCATAAATTT
ATTGCCTGAGAACTTAGTTCAGCCTTTGCTAATGCCAAAATGCTCTGGCTTTGTATTTTCTTTA
CAGCATAGATAGAAAAATGCACATTTTTCCACACTCAGCTTTCCCCTAGCATGGACAAGATTTT
CAGCCATTTTTGCCACATATACATTTTTAAGGAAAAAATATTTTTCTCTGTAACAAAGTTCTGG
TTACACCGTTTTAAAGGTGACTTGTCAGGAGTTGAGACTTCCCTGCCGGATTCTATTTTGAAAG
TAAATGGTCTTCCCTCCTTGTTCCGATTCTGCGTTCCCATCGTCAGACAACTTTGAAGTATTAG
AAACCACTGTATATATGTGGAAAGCAAGGTCAGCCAGACCTGTTAGAATTGGTGTGCACTCACC
TGAGAGATCTGGCAGGTTGAATATATTTATGTGTATTTCTCCACAGTGCTTGCTTTGCCCTGTT
GGTAAGGATTTTAAATAACCATGCTCAAAAGAGCTGTTCTAATCTGCGTTTTGCATGTTAAGTG
TTAATATCAAACATTCTTTACGTGCTCGAGGTATTGCTTTTAACATTCTACTTTGCCAGTTTCT
TCATTAGATTAATTGACATGTATTATTTAAATGACCAGTGATGCTTTGTGCAATTATGAATGTT
GAAGATTAAAGTACATAGTTACTAATTTGTCATTTGCTATTAA

hide sequence

RefSeq Acc Id:

XM_055114875 ⟹ XP_054970850

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	6	167,216,392 - 167,260,594 (-)	NCBI
NHGRI_mPanPan1	7	19,228,926 - 19,270,838 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_003813522	(Get FASTA)	NCBI Sequence Viewer
	XP_003813523	(Get FASTA)	NCBI Sequence Viewer
	XP_054970850	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSPPAP00000009535
	ENSPPAP00000009535.1
	ENSPPAP00000009536
	ENSPPAP00000009536.1
	ENSPPAP00000009537.1
	ENSPPAP00000009538.1
	ENSPPAP00000009540.1

RefSeq Acc Id:	XP_003813523 ⟸ XM_003813475
- Peptide Label:	isoform X3
- UniProtKB:	A0A2R8ZX24 (UniProtKB/TrEMBL), A0A2R8ZY84 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSLRRHIGNPEYLMKRIPQNPRYQHIKSRLDTGNSMTKYTEKLEEIKKNYRYKKDELFKRLKVT TFAQLIIQVASLSDQTLEVTAEEIQRLEDNDSAASDPDAETTARTNGKGNPGEQSPSPEQFINN AGAGDSSRSTLQSVISGVGELDLDKGPVKKAEPHTKDKPYPDCPFLLLDVRDRDSYQQCHIVGA YSYPIATLSRTMNPYSNDILEYKNAHGKIIILYDDDERLASQAATTMCERGFENLFMLSGGRLN QVNSSGRESKVPGARSAQNLPGGGPASHSNPRSLSSGHLQGKPWK hide sequence

RefSeq Acc Id:	XP_003813522 ⟸ XM_003813474
- Peptide Label:	isoform X2
- UniProtKB:	A0A2R8ZX31 (UniProtKB/TrEMBL), A0A2R9A0U0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSLRRHIGNPEYLMKRIPQNPRYQHIKSRLDTGNSMTKYTEKLEEIKKNYRYKKDELFKRLKVT TFAQLIIQVASLSDQTLEVTAEEIQRLEDNDSAASDPDAETTARTNGKGNPGEQSPSPEQFINN AGAGDSSRSTLQSVISGVGELDLDKGPVKKAEPHTKDKPYPDCPFLLLDVRDRDSYQQCHIVGA YSYPIATLSRTMNPYSNDILEYKNAHGKIIILYDDDERLASQAATTMCERGFENLFMLSGGLKV LAQKFPEGLITGSLPASCQQALPPGSARKRSSPKGPPLPAENKWRFTPEDLKKIEYYLEEEQGP ADHPSRLNQVNSSGRESKVPGARSAQNLPGGGPASHSNPRSLSSGHLQGKPWK hide sequence

RefSeq Acc Id:

ENSPPAP00000009536 ⟸ ENSPPAT00000032179

RefSeq Acc Id:

ENSPPAP00000009535 ⟸ ENSPPAT00000032178

RefSeq Acc Id:

ENSPPAP00000009540 ⟸ ENSPPAT00000032183

RefSeq Acc Id:

ENSPPAP00000009538 ⟸ ENSPPAT00000032181

RefSeq Acc Id:

ENSPPAP00000009537 ⟸ ENSPPAT00000032180

RefSeq Acc Id:	XP_054970850 ⟸ XM_055114875
- Peptide Label:	isoform X1
- UniProtKB:	A0A2R9A0U0 (UniProtKB/TrEMBL)

Protein Domains

Rhodanese

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSPPAG00000027998	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSPPAT00000032178.1	UniProtKB/TrEMBL
	ENSPPAT00000032179.1	UniProtKB/TrEMBL
	ENSPPAT00000032180.1	UniProtKB/TrEMBL
	ENSPPAT00000032181.1	UniProtKB/TrEMBL
	ENSPPAT00000032183.1	UniProtKB/TrEMBL
Gene3D-CATH	3.40.250.10	UniProtKB/TrEMBL
InterPro	Rhodanese-like_dom	UniProtKB/TrEMBL
	Rhodanese-like_dom_sf	UniProtKB/TrEMBL
KEGG Report	pps:100981729	UniProtKB/TrEMBL
NCBI Gene	CEP41	ENTREZGENE
PANTHER	CENTROSOMAL PROTEIN OF 41 KDA	UniProtKB/TrEMBL
	CENTROSOMAL PROTEIN OF 41 KDA	UniProtKB/TrEMBL
Pfam	Rhodanese	UniProtKB/TrEMBL
PROSITE	RHODANESE_3	UniProtKB/TrEMBL
SMART	RHOD	UniProtKB/TrEMBL
Superfamily-SCOP	SSF52821	UniProtKB/TrEMBL
UniProt	A0A2R8ZX24	ENTREZGENE, UniProtKB/TrEMBL
	A0A2R8ZX29_PANPA	UniProtKB/TrEMBL
	A0A2R8ZX31	ENTREZGENE, UniProtKB/TrEMBL
	A0A2R8ZY84	ENTREZGENE, UniProtKB/TrEMBL
	A0A2R9A0U0	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM