ISCA1 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 11 | 53,120,297 - 53,141,390 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 9 | 53,125,609 - 53,143,778 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 9 | 57,410,328 - 57,428,477 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 9 | 85,467,139 - 85,485,107 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 9 | 85,467,145 - 85,485,107 (-) | Ensembl | panpan1.1 | | panPan2 | |
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ISCA1 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 9 | 86,264,546 - 86,282,538 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 9 | 86,264,546 - 86,283,102 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 9 | 88,879,461 - 88,897,453 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 9 | 88,069,281 - 88,087,310 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 9 | 86,109,015 - 86,127,044 | NCBI | | | | | Celera | 9 | 59,449,572 - 59,467,604 (-) | NCBI | | Celera | | | Cytogenetic Map | 9 | q21.33 | NCBI | | | | | HuRef | 9 | 58,702,212 - 58,720,322 (-) | NCBI | | HuRef | | | CHM1_1 | 9 | 89,025,905 - 89,043,932 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 9 | 98,415,772 - 98,433,767 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Isca1 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 13 | 59,903,229 - 59,917,603 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 13 | 59,903,223 - 59,917,624 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 13 | 59,755,415 - 59,769,789 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 13 | 59,755,409 - 59,769,810 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 13 | 59,856,776 - 59,871,150 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 13 | 59,765,038 - 59,779,412 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 13 | 60,813,565 - 60,829,332 (-) | NCBI | | Celera | | | Cytogenetic Map | 13 | B2 | NCBI | | | | | cM Map | 13 | 31.88 | NCBI | | | | |
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Isca1 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 17 | 4,910,816 - 4,923,478 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 17 | 4,905,291 - 4,917,955 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 17 | 4,905,287 - 4,917,955 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 17 | 4,924,890 - 4,937,662 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 17 | 6,466,859 - 6,479,549 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 17 | 4,921,330 - 4,934,105 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 17 | 5,281,727 - 5,294,386 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 17 | 5,281,727 - 5,294,384 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 17 | 7,507,069 - 7,519,772 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 17 | 10,808,966 - 10,821,681 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 17 | 10,808,965 - 10,821,679 (+) | NCBI | | | | | Celera | 17 | 5,026,823 - 5,039,495 (+) | NCBI | | Celera | | | Cytogenetic Map | 17 | p14 | NCBI | | | | |
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Isca1 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955432 | 1,335,481 - 1,349,847 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955432 | 1,335,481 - 1,349,852 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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Isca1 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024404947 | 120,048,452 - 120,064,421 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936680 | 1,673,666 - 1,689,635 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936680 | 1,673,666 - 1,689,646 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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LOC100513185 (Sus scrofa - pig) |
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ISCA1 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 12 | 96,900,619 - 96,915,611 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 12 | 96,897,849 - 96,915,540 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666038 | 85,250,660 - 85,266,902 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Isca1 (Heterocephalus glaber - naked mole-rat) |
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