NADSYN1 (NAD synthetase 1) - Rat Genome Database

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Gene: NADSYN1 (NAD synthetase 1) Pan paniscus
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Symbol: NADSYN1
Name: NAD synthetase 1
RGD ID: 11812717
Description: ENCODES a protein that exhibits ATP binding (inferred); glutaminase activity (inferred); ligase activity (inferred); INVOLVED IN 'de novo' NAD biosynthetic process (inferred); NAD biosynthetic process (inferred); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; de novo nicotinamide adenine dinucleotide biosynthetic pathway; glutamic acid/glutamate metabolic pathway; ASSOCIATED WITH 3-methylglutaconic aciduria type 7b (ortholog); cerebral folate receptor alpha deficiency (ortholog); Dyslipidemias (ortholog); FOUND IN cytoplasm (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: glutamine-dependent NAD(+) synthetase
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2972,339,234 - 72,432,547 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11173,376,859 - 73,450,206 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01166,464,320 - 66,537,649 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11169,735,871 - 69,793,226 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1169,735,871 - 69,788,953 (+)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
NADSYN1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2972,339,234 - 72,432,547 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11173,376,859 - 73,450,206 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01166,464,320 - 66,537,649 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11169,735,871 - 69,793,226 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1169,735,871 - 69,788,953 (+)Ensemblpanpan1.1panPan2
NADSYN1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381171,453,203 - 71,501,816 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1171,453,109 - 71,524,107 (+)EnsemblGRCh38hg38GRCh38
GRCh371171,164,249 - 71,212,862 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361170,841,865 - 70,890,232 (+)NCBINCBI36Build 36hg18NCBI36
Celera1168,457,742 - 68,506,114 (+)NCBICelera
Cytogenetic Map11q13.4NCBI
HuRef1167,457,809 - 67,506,195 (+)NCBIHuRef
CHM1_11171,048,194 - 71,096,600 (+)NCBICHM1_1
T2T-CHM13v2.01171,380,158 - 71,428,792 (+)NCBIT2T-CHM13v2.0
Nadsyn1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm397143,349,326 - 143,376,598 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl7143,349,321 - 143,376,586 (-)EnsemblGRCm39 Ensembl
GRCm387143,795,589 - 143,822,862 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl7143,795,584 - 143,822,849 (-)EnsemblGRCm38mm10GRCm38
MGSCv377150,981,499 - 151,008,746 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv367143,604,984 - 143,632,231 (-)NCBIMGSCv36mm8
Celera7143,551,948 - 143,579,416 (-)NCBICelera
Cytogenetic Map7F5NCBI
cM Map788.32NCBI
Nadsyn1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81208,410,914 - 208,439,242 (-)NCBIGRCr8
mRatBN7.21198,981,559 - 199,009,853 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1198,981,604 - 199,009,869 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1207,361,638 - 207,389,345 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01214,443,560 - 214,471,187 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01207,117,728 - 207,145,356 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01216,985,710 - 217,013,743 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1216,985,714 - 217,013,702 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01223,722,251 - 223,869,610 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41204,187,585 - 204,237,424 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11204,341,037 - 204,390,877 (-)NCBI
Celera1196,545,283 - 196,572,552 (-)NCBICelera
Cytogenetic Map1q42NCBI
Nadsyn1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542215,066,708 - 15,114,049 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495542215,067,711 - 15,113,942 (-)NCBIChiLan1.0ChiLan1.0
NADSYN1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11847,216,547 - 47,254,582 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1847,216,577 - 47,254,514 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1845,824,631 - 45,862,252 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01847,897,151 - 47,934,979 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1847,897,155 - 47,934,998 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11847,338,020 - 47,375,995 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01846,924,178 - 46,961,816 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01847,670,678 - 47,708,646 (-)NCBIUU_Cfam_GSD_1.0
Nadsyn1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244049473,451,773 - 3,480,634 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367941,396,703 - 1,423,709 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049367941,394,975 - 1,423,807 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NADSYN1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl22,334,799 - 2,372,361 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.122,334,793 - 2,372,356 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.22725,955 - 739,214 (-)NCBISscrofa10.2Sscrofa10.2susScr3
NADSYN1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.113,189,054 - 3,243,087 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl13,188,348 - 3,238,435 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666038100,374,580 - 100,430,183 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Nadsyn1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476716,069,780 - 16,115,162 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476716,069,895 - 16,115,029 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


RefSeq Acc Id: ENSPPAT00000001879   ⟹   ENSPPAP00000000437
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1169,735,871 - 69,788,953 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000001959   ⟹   ENSPPAP00000000446
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1169,740,595 - 69,788,764 (+)Ensembl
RefSeq Acc Id: XM_003828773   ⟹   XP_003828821
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2972,339,234 - 72,387,893 (+)NCBI
NHGRI_mPanPan11173,381,428 - 73,430,082 (+)NCBI
Mhudiblu_PPA_v01166,468,972 - 66,517,549 (+)NCBI
PanPan1.11169,740,407 - 69,788,953 (+)NCBI
Sequence:
RefSeq Acc Id: XM_034933266   ⟹   XP_034789157
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2972,339,242 - 72,387,640 (+)NCBI
NHGRI_mPanPan11173,381,436 - 73,429,836 (+)NCBI
Mhudiblu_PPA_v01166,468,969 - 66,515,888 (+)NCBI
RefSeq Acc Id: XM_063608636   ⟹   XP_063464706
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2972,339,296 - 72,385,083 (+)NCBI
RefSeq Acc Id: XR_001338636
Type: NON-CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2972,339,296 - 72,392,641 (+)NCBI
NHGRI_mPanPan11173,381,490 - 73,434,821 (+)NCBI
Mhudiblu_PPA_v01166,468,972 - 66,521,973 (+)NCBI
PanPan1.11169,740,407 - 69,792,445 (+)NCBI
Sequence:
RefSeq Acc Id: XR_004665160
Type: NON-CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2972,339,242 - 72,414,322 (+)NCBI
NHGRI_mPanPan11173,381,490 - 73,450,206 (+)NCBI
Mhudiblu_PPA_v01166,468,972 - 66,537,649 (+)NCBI
RefSeq Acc Id: XR_008620113
Type: NON-CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2972,339,296 - 72,392,641 (+)NCBI
NHGRI_mPanPan11173,381,490 - 73,434,773 (+)NCBI
RefSeq Acc Id: XR_010113467
Type: NON-CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2972,339,296 - 72,392,641 (+)NCBI
RefSeq Acc Id: XR_010113468
Type: NON-CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2972,339,242 - 72,414,322 (+)NCBI
RefSeq Acc Id: XR_010113469
Type: NON-CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2972,339,242 - 72,432,547 (+)NCBI
Protein Sequences
Protein RefSeqs XP_003828821 (Get FASTA)   NCBI Sequence Viewer  
  XP_034789157 (Get FASTA)   NCBI Sequence Viewer  
  XP_063464706 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000000437.1
  ENSPPAP00000000446
  ENSPPAP00000000446.1
RefSeq Acc Id: XP_003828821   ⟸   XM_003828773
- Peptide Label: isoform X3
- UniProtKB: A0A2R8ZCV7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_034789157   ⟸   XM_034933266
- Peptide Label: isoform X1
- UniProtKB: A0A2R8ZCV7 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSPPAP00000000437   ⟸   ENSPPAT00000001879
RefSeq Acc Id: ENSPPAP00000000446   ⟸   ENSPPAT00000001959
RefSeq Acc Id: XP_063464706   ⟸   XM_063608636
- Peptide Label: isoform X2
Protein Domains
CN hydrolase


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000001380 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000001879.1 UniProtKB/TrEMBL
  ENSPPAT00000001959.1 UniProtKB/TrEMBL
Gene3D-CATH 3.40.50.620 UniProtKB/TrEMBL
  3.60.110.10 UniProtKB/TrEMBL
InterPro C-N_Hydrolase UniProtKB/TrEMBL
  C-N_Hydrolase_sf UniProtKB/TrEMBL
  Gln-dep_NAD_synthase UniProtKB/TrEMBL
  NAD/GMP_synthase UniProtKB/TrEMBL
  NAD_synthase UniProtKB/TrEMBL
  Rossmann-like_a/b/a_fold UniProtKB/TrEMBL
NCBI Gene NADSYN1 ENTREZGENE
PANTHER GLUTAMINE-DEPENDENT NAD(+) SYNTHETASE UniProtKB/TrEMBL
  PTHR23090 UniProtKB/TrEMBL
Pfam CN_hydrolase UniProtKB/TrEMBL
  NAD_synthase UniProtKB/TrEMBL
PIRSF NADS_GAT UniProtKB/TrEMBL
PROSITE CN_HYDROLASE UniProtKB/TrEMBL
Superfamily-SCOP Adenine nucleotide alpha hydrolases-like UniProtKB/TrEMBL
  SSF56317 UniProtKB/TrEMBL
UniProt A0A2R8Z6M8_PANPA UniProtKB/TrEMBL
  A0A2R8ZCV7 ENTREZGENE, UniProtKB/TrEMBL