JUP (junction plakoglobin) - Rat Genome Database
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Gene: JUP (junction plakoglobin) Pan paniscus
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Symbol: JUP
Name: junction plakoglobin
RGD ID: 11812651
Description: ENCODES a protein that exhibits alpha-catenin binding (ortholog); cadherin binding (ortholog); cell adhesion molecule binding (ortholog); INVOLVED IN bundle of His cell-Purkinje myocyte adhesion involved in cell communication (ortholog); cell adhesion (ortholog); cell migration (ortholog); PARTICIPATES IN E-cadherin signaling pathway; N-cadherin signaling pathway; ASSOCIATED WITH arrhythmogenic right ventricular cardiomyopathy (ortholog); arrhythmogenic right ventricular dysplasia 12 (ortholog); Breast Neoplasms (ortholog); FOUND IN actin cytoskeleton (ortholog); adherens junction (ortholog); apicolateral plasma membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11715,747,163 - 15,777,479 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1715,747,163 - 15,777,479 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01715,527,115 - 15,559,251 (+)NCBIMhudiblu_PPA_v0panPan3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Pathway Annotations     Click to see Annotation Detail View
References

Genomics

Comparative Map Data
JUP
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11715,747,163 - 15,777,479 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1715,747,163 - 15,777,479 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01715,527,115 - 15,559,251 (+)NCBIMhudiblu_PPA_v0panPan3
JUP
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1741,754,604 - 41,786,931 (-)EnsemblGRCh38hg38GRCh38
GRCh381741,754,608 - 41,786,711 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh371739,910,861 - 39,942,963 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361737,164,390 - 37,196,475 (-)NCBINCBI36hg18NCBI36
Build 341737,164,389 - 37,196,475NCBI
Celera1736,562,207 - 36,594,276 (-)NCBI
Cytogenetic Map17q21.2NCBI
HuRef1735,672,969 - 35,704,921 (-)NCBIHuRef
CHM1_11740,146,477 - 40,178,584 (-)NCBICHM1_1
Jup
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3911100,259,682 - 100,288,639 (-)NCBIGRCm39mm39
GRCm39 Ensembl11100,259,784 - 100,288,589 (-)Ensembl
GRCm3811100,368,856 - 100,397,839 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl11100,368,958 - 100,397,763 (-)EnsemblGRCm38mm10GRCm38
MGSCv3711100,231,933 - 100,259,053 (-)NCBIGRCm37mm9NCBIm37
MGSCv3611100,186,709 - 100,213,829 (-)NCBImm8
Celera11110,988,014 - 111,016,158 (-)NCBICelera
Cytogenetic Map11DNCBI
cM Map1163.47NCBI
Jup
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21085,300,438 - 85,327,378 (-)NCBI
Rnor_6.0 Ensembl1088,279,632 - 88,307,412 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01088,280,517 - 88,307,451 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01088,073,764 - 88,100,700 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41089,307,938 - 89,335,254 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11089,322,309 - 89,349,624 (-)NCBI
Celera1084,018,429 - 84,045,045 (-)NCBICelera
Cytogenetic Map10q31NCBI
Jup
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495545115,989,180 - 16,004,155 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495545115,993,055 - 16,004,152 (-)NCBIChiLan1.0ChiLan1.0
JUP
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl921,028,828 - 21,053,071 (+)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.1921,028,773 - 21,053,071 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Jup
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_00493649016,671,176 - 16,694,552 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JUP
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1220,901,396 - 20,931,211 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11220,902,395 - 20,931,208 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21221,145,385 - 21,184,606 (-)NCBISscrofa10.2Sscrofa10.2susScr3
LOC103243439
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11664,470,974 - 64,503,085 (+)NCBI
ChlSab1.1 Ensembl1664,470,959 - 64,503,322 (+)Ensembl
Jup
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247951,954,733 - 1,972,080 (+)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSPPAT00000059263   ⟹   ENSPPAP00000036371
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1715,747,163 - 15,777,479 (+)Ensembl
RefSeq Acc Id: XM_003813837   ⟹   XP_003813885
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.11715,747,163 - 15,777,479 (+)NCBI
Mhudiblu_PPA_v01715,527,792 - 15,559,251 (+)NCBI
Sequence:
RefSeq Acc Id: XM_034941880   ⟹   XP_034797771
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v01715,527,168 - 15,559,251 (+)NCBI
RefSeq Acc Id: XM_034941881   ⟹   XP_034797772
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v01715,527,120 - 15,559,251 (+)NCBI
RefSeq Acc Id: XM_034941882   ⟹   XP_034797773
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v01715,527,140 - 15,559,251 (+)NCBI
RefSeq Acc Id: XM_034941883   ⟹   XP_034797774
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v01715,527,120 - 15,559,251 (+)NCBI
RefSeq Acc Id: XM_034941884   ⟹   XP_034797775
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v01715,527,115 - 15,559,251 (+)NCBI
RefSeq Acc Id: XM_034941886   ⟹   XP_034797777
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v01715,527,177 - 15,559,251 (+)NCBI
Reference Sequences
RefSeq Acc Id: XP_003813885   ⟸   XM_003813837
- Sequence:
RefSeq Acc Id: XP_034797775   ⟸   XM_034941884
RefSeq Acc Id: XP_034797772   ⟸   XM_034941881
RefSeq Acc Id: XP_034797774   ⟸   XM_034941883
RefSeq Acc Id: XP_034797773   ⟸   XM_034941882
RefSeq Acc Id: XP_034797771   ⟸   XM_034941880
RefSeq Acc Id: XP_034797777   ⟸   XM_034941886
RefSeq Acc Id: ENSPPAP00000036371   ⟸   ENSPPAT00000059263


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000040955 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSPPAP00000036371 UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000059263 UniProtKB/TrEMBL
Gene3D-CATH 1.25.10.10 UniProtKB/TrEMBL
InterPro ARM-like UniProtKB/TrEMBL
  ARM-type_fold UniProtKB/TrEMBL
  Armadillo UniProtKB/TrEMBL
  Beta-catenin UniProtKB/TrEMBL
  Plakoglobin/HMP-2 UniProtKB/TrEMBL
KEGG Report pps:100974976 UniProtKB/TrEMBL
NCBI Gene JUP ENTREZGENE
PANTHER PTHR45976 UniProtKB/TrEMBL
  PTHR45976:SF3 UniProtKB/TrEMBL
Pfam Arm UniProtKB/TrEMBL
PRINTS BCATNINFAMLY UniProtKB/TrEMBL
PROSITE ARM_REPEAT UniProtKB/TrEMBL
SMART ARM UniProtKB/TrEMBL
Superfamily-SCOP SSF48371 UniProtKB/TrEMBL
UniProt A0A2R9C352_PANPA UniProtKB/TrEMBL