NR4A1 (nuclear receptor subfamily 4 group A member 1) - Rat Genome Database
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Gene: NR4A1 (nuclear receptor subfamily 4 group A member 1) Pan paniscus
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Symbol: NR4A1
Name: nuclear receptor subfamily 4 group A member 1
RGD ID: 11806137
Description: ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); glucocorticoid receptor binding (ortholog); INVOLVED IN apoptotic process (ortholog); cell migration involved in sprouting angiogenesis (ortholog); cellular response to corticotropin-releasing hormone stimulus (ortholog); ASSOCIATED WITH Albuminuria (ortholog); blood pressure trait (ortholog); blood urea nitrogen amount (ortholog); FOUND IN cytosol (ortholog); nuclear membrane (ortholog); nucleoplasm (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11237,480,300 - 37,498,290 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1237,480,300 - 37,501,188 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01236,703,903 - 36,740,211 (-)NCBIMhudiblu_PPA_v0panPan3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component


References

Genomics

Comparative Map Data
NR4A1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11237,480,300 - 37,498,290 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1237,480,300 - 37,501,188 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01236,703,903 - 36,740,211 (-)NCBIMhudiblu_PPA_v0panPan3
NR4A1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1252,022,832 - 52,059,507 (+)EnsemblGRCh38hg38GRCh38
GRCh381252,022,832 - 52,059,507 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh371252,416,616 - 52,453,291 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361250,731,458 - 50,739,554 (+)NCBINCBI36hg18NCBI36
Build 341250,723,762 - 50,736,019NCBI
Celera1251,247,867 - 51,255,961 (+)NCBI
Cytogenetic Map12q13.13NCBI
HuRef1249,449,770 - 49,486,519 (+)NCBIHuRef
CHM1_11252,382,884 - 52,419,560 (+)NCBICHM1_1
Nr4a1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3915101,151,788 - 101,172,676 (+)NCBIGRCm39mm39
GRCm3815101,253,902 - 101,274,795 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl15101,254,269 - 101,274,795 (+)EnsemblGRCm38mm10GRCm38
MGSCv3715101,097,277 - 101,105,226 (+)NCBIGRCm37mm9NCBIm37
MGSCv3615101,094,896 - 101,102,826 (+)NCBImm8
Celera15103,414,983 - 103,422,853 (+)NCBICelera
Cytogenetic Map15F1NCBI
Nr4a1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.07142,899,358 - 142,920,216 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl7142,905,758 - 142,920,216 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.07140,700,242 - 140,721,073 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.47140,012,807 - 140,020,590 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.17140,089,243 - 140,097,024 (+)NCBI
Celera7128,846,928 - 128,854,640 (+)NCBICelera
Cytogenetic Map7q36NCBI
Nr4a1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555472,404,532 - 2,431,050 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555472,404,532 - 2,426,882 (+)NCBIChiLan1.0ChiLan1.0
NR4A1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl272,891,053 - 2,955,655 (-)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.1272,947,729 - 2,965,045 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Nr4a1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049365129,486,096 - 9,508,338 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NR4A1
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11148,208,354 - 48,232,857 (+)NCBI
ChlSab1.1 Ensembl1148,208,587 - 48,233,063 (+)Ensembl
Nr4a1
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624816271,345 - 288,265 (-)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSPPAT00000047416   ⟹   ENSPPAP00000024591
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1237,480,300 - 37,498,308 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000047423   ⟹   ENSPPAP00000024598
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1237,480,300 - 37,488,160 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000047434   ⟹   ENSPPAP00000024609
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1237,480,861 - 37,501,188 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000047437   ⟹   ENSPPAP00000024612
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1237,480,861 - 37,485,717 (-)Ensembl
RefSeq Acc Id: XM_008956457   ⟹   XP_008954705
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.11237,480,303 - 37,488,439 (-)NCBI
Mhudiblu_PPA_v01236,703,903 - 36,712,019 (-)NCBI
Sequence:
RefSeq Acc Id: XM_034935809   ⟹   XP_034791700
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v01236,703,903 - 36,725,725 (-)NCBI
RefSeq Acc Id: XM_034935810   ⟹   XP_034791701
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v01236,703,903 - 36,725,368 (-)NCBI
RefSeq Acc Id: XM_034935811   ⟹   XP_034791702
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v01236,703,903 - 36,725,361 (-)NCBI
RefSeq Acc Id: XM_034935812   ⟹   XP_034791703
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v01236,703,903 - 36,740,211 (-)NCBI
RefSeq Acc Id: XM_034935813   ⟹   XP_034791704
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v01236,703,903 - 36,719,206 (-)NCBI
RefSeq Acc Id: XM_034935814   ⟹   XP_034791705
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v01236,703,903 - 36,712,036 (-)NCBI
Reference Sequences
RefSeq Acc Id: XP_008954705   ⟸   XM_008956457
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_034791703   ⟸   XM_034935812
- Peptide Label: isoform X3
RefSeq Acc Id: XP_034791700   ⟸   XM_034935809
- Peptide Label: isoform X1
RefSeq Acc Id: XP_034791701   ⟸   XM_034935810
- Peptide Label: isoform X2
RefSeq Acc Id: XP_034791702   ⟸   XM_034935811
- Peptide Label: isoform X3
RefSeq Acc Id: XP_034791704   ⟸   XM_034935813
- Peptide Label: isoform X4
RefSeq Acc Id: XP_034791705   ⟸   XM_034935814
- Peptide Label: isoform X4
RefSeq Acc Id: ENSPPAP00000024591   ⟸   ENSPPAT00000047416
RefSeq Acc Id: ENSPPAP00000024598   ⟸   ENSPPAT00000047423
RefSeq Acc Id: ENSPPAP00000024612   ⟸   ENSPPAT00000047437
RefSeq Acc Id: ENSPPAP00000024609   ⟸   ENSPPAT00000047434
Protein Domains
NR LBD   Nuclear receptor


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000035428 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSPPAP00000024591 UniProtKB/TrEMBL
  ENSPPAP00000024598 UniProtKB/TrEMBL
  ENSPPAP00000024609 UniProtKB/TrEMBL
  ENSPPAP00000024612 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000047416 UniProtKB/TrEMBL
  ENSPPAT00000047423 UniProtKB/TrEMBL
  ENSPPAT00000047434 UniProtKB/TrEMBL
  ENSPPAT00000047437 UniProtKB/TrEMBL
Gene3D-CATH 1.10.565.10 UniProtKB/TrEMBL
  3.30.50.10 UniProtKB/TrEMBL
InterPro NHR_like_dom_sf UniProtKB/TrEMBL
  Nuc_orp_HMR_rcpt UniProtKB/TrEMBL
  Nuc_orph_rcpt UniProtKB/TrEMBL
  Nucl_hrmn_rcpt_lig-bd UniProtKB/TrEMBL
  Nuclear_hrmn_rcpt UniProtKB/TrEMBL
  Znf_hrmn_rcpt UniProtKB/TrEMBL
  Znf_NHR/GATA UniProtKB/TrEMBL
NCBI Gene NR4A1 ENTREZGENE
Pfam Hormone_recep UniProtKB/TrEMBL
  zf-C4 UniProtKB/TrEMBL
PRINTS HMRNUCRECPTR UniProtKB/TrEMBL
  NUCLEARECPTR UniProtKB/TrEMBL
  STRDHORMONER UniProtKB/TrEMBL
  STROIDFINGER UniProtKB/TrEMBL
PROSITE NR_LBD UniProtKB/TrEMBL
  NUCLEAR_REC_DBD_1 UniProtKB/TrEMBL
  NUCLEAR_REC_DBD_2 UniProtKB/TrEMBL
SMART HOLI UniProtKB/TrEMBL
  ZnF_C4 UniProtKB/TrEMBL
Superfamily-SCOP SSF48508 UniProtKB/TrEMBL
UniProt A0A2R9B4U3_PANPA UniProtKB/TrEMBL
  A0A2R9B4V2_PANPA UniProtKB/TrEMBL
  A0A2R9B6A1_PANPA UniProtKB/TrEMBL
  A0A2R9BBQ9_PANPA UniProtKB/TrEMBL