LOC100991621 (regenerating islet-derived protein 3-alpha) - Rat Genome Database

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Gene: LOC100991621 (regenerating islet-derived protein 3-alpha) Pan paniscus
Analyze
Symbol: LOC100991621 (Ensembl: REG3A)
Name: regenerating islet-derived protein 3-alpha (Ensembl:regenerating family member 3 alpha)
RGD ID: 11803230
Description: ENCODES a protein that exhibits carbohydrate binding (inferred); hormone activity (inferred); identical protein binding (inferred); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (inferred); disruption of cell wall in another organism (inferred); negative regulation of inflammatory response to wounding (inferred); FOUND IN collagen-containing extracellular matrix (inferred); extracellular space (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: REG3A; regenerating islet-derived 3 alpha
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21247,194,398 - 47,197,145 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12A47,197,154 - 47,199,901 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02A79,243,526 - 79,246,273 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12A80,807,308 - 80,810,056 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A80,807,308 - 80,810,056 (-)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:30032202  


Genomics


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSPPAT00000024291   ⟹   ENSPPAP00000005344
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl2A80,807,308 - 80,810,056 (-)Ensembl
RefSeq Acc Id: XM_003816608   ⟹   XP_003816656
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21247,194,398 - 47,197,145 (+)NCBI
NHGRI_mPanPan12A47,197,154 - 47,199,901 (+)NCBI
Mhudiblu_PPA_v02A79,243,526 - 79,246,267 (-)NCBI
PanPan1.12A80,807,308 - 80,810,050 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_003816656 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000005344.1
Reference Protein Sequences
RefSeq Acc Id: XP_003816656   ⟸   XM_003816608
- UniProtKB: A0A2R8ZL76 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSPPAP00000005344   ⟸   ENSPPAT00000024291
Protein Domains
C-type lectin


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000022156 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000024291.1 UniProtKB/TrEMBL
Gene3D-CATH 3.10.100.10 UniProtKB/TrEMBL
InterPro C-type_lectin-like UniProtKB/TrEMBL
  C-type_lectin-like/link_sf UniProtKB/TrEMBL
  C-type_lectin_CS UniProtKB/TrEMBL
  CTDL_fold UniProtKB/TrEMBL
KEGG Report pps:100991621 UniProtKB/TrEMBL
NCBI Gene LOC100991621 ENTREZGENE
PANTHER MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED UniProtKB/TrEMBL
  REGENERATING ISLET-DERIVED PROTEIN 3-ALPHA UniProtKB/TrEMBL
Pfam Lectin_C UniProtKB/TrEMBL
PRINTS PNCREATITSAP UniProtKB/TrEMBL
PROSITE C_TYPE_LECTIN_1 UniProtKB/TrEMBL
  C_TYPE_LECTIN_2 UniProtKB/TrEMBL
SMART CLECT UniProtKB/TrEMBL
Superfamily-SCOP SSF56436 UniProtKB/TrEMBL
UniProt A0A2R8ZL76 ENTREZGENE, UniProtKB/TrEMBL