CUTC (cutC copper transporter) - Rat Genome Database

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Gene: CUTC (cutC copper transporter) Pan paniscus
Analyze
Symbol: CUTC
Name: cutC copper transporter
RGD ID: 11802458
Description: ENCODES a protein that exhibits copper ion binding (inferred); INVOLVED IN protein tetramerization (inferred); ASSOCIATED WITH cytochrome-c oxidase deficiency disease (ortholog); genetic disease (ortholog); Leigh disease (ortholog); FOUND IN cytoplasm (inferred); cytosol (inferred); nucleolus (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: copper homeostasis protein cutC homolog; cutC copper transporter homolog
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v28111,641,183 - 111,665,140 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan110111,646,503 - 111,670,460 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01096,349,218 - 96,373,147 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11099,841,089 - 99,865,031 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1099,841,237 - 99,864,633 (+)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IEA)
cytosol  (IEA)
nucleolus  (IEA)
nucleoplasm  (IEA)
nucleus  (IEA)

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
CUTC
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v28111,641,183 - 111,665,140 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan110111,646,503 - 111,670,460 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01096,349,218 - 96,373,147 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11099,841,089 - 99,865,031 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1099,841,237 - 99,864,633 (+)Ensemblpanpan1.1panPan2
CUTC
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381099,732,234 - 99,756,134 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1099,702,558 - 99,756,134 (+)EnsemblGRCh38hg38GRCh38
GRCh3710101,491,991 - 101,515,891 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3610101,481,948 - 101,505,884 (+)NCBINCBI36Build 36hg18NCBI36
Build 3410101,481,992 - 101,505,878NCBI
Celera1095,229,343 - 95,253,279 (+)NCBICelera
Cytogenetic Map10q24.2NCBI
HuRef1095,119,346 - 95,143,277 (+)NCBIHuRef
CHM1_110101,774,443 - 101,798,383 (+)NCBICHM1_1
T2T-CHM13v2.010100,615,224 - 100,639,117 (+)NCBIT2T-CHM13v2.0
Cutc
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391943,741,462 - 43,757,077 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1943,741,435 - 43,757,077 (+)EnsemblGRCm39 Ensembl
GRCm381943,753,023 - 43,768,638 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1943,752,996 - 43,768,638 (+)EnsemblGRCm38mm10GRCm38
MGSCv371943,827,513 - 43,843,128 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361943,806,307 - 43,821,942 (+)NCBIMGSCv36mm8
Celera1944,540,986 - 44,556,690 (+)NCBICelera
Cytogenetic Map19C3NCBI
cM Map1936.67NCBI
Cutc
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81252,571,489 - 252,586,269 (+)NCBIGRCr8
mRatBN7.21242,622,281 - 242,637,048 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1242,622,276 - 242,637,047 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1250,770,987 - 250,785,937 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01257,468,037 - 257,482,973 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01250,121,136 - 250,136,086 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01263,511,537 - 263,526,308 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1263,511,537 - 263,526,307 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01270,956,594 - 270,971,365 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41247,062,300 - 247,077,070 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11247,176,706 - 247,191,523 (-)NCBI
Celera1238,441,063 - 238,455,833 (+)NCBICelera
Cytogenetic Map1q54NCBI
Cutc
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555075,617,598 - 5,657,848 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555075,617,595 - 5,664,131 (+)NCBIChiLan1.0ChiLan1.0
CUTC
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12812,624,242 - 12,651,179 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2812,624,323 - 12,651,153 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2812,807,583 - 12,846,004 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02813,091,975 - 13,130,475 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2813,091,990 - 13,122,483 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12812,638,824 - 12,677,247 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02812,669,746 - 12,707,952 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02812,811,355 - 12,849,804 (+)NCBIUU_Cfam_GSD_1.0
Cutc
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440721334,325,408 - 34,346,035 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936636362,808 - 385,668 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936636364,527 - 385,139 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CUTC
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl14110,895,067 - 110,925,428 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.114110,895,063 - 110,921,544 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.214120,341,184 - 120,366,815 (+)NCBISscrofa10.2Sscrofa10.2susScr3
CUTC
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1992,797,023 - 92,828,547 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl992,797,043 - 92,833,105 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604853,798,823 - 53,821,576 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Cutc
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473711,452,714 - 11,485,045 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473711,452,939 - 11,484,981 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


RefSeq Acc Id: ENSPPAT00000042776   ⟹   ENSPPAP00000019993
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1099,841,237 - 99,864,633 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000042783   ⟹   ENSPPAP00000020000
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1099,841,237 - 99,858,518 (+)Ensembl
RefSeq Acc Id: XM_003825458   ⟹   XP_003825506
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v28111,641,241 - 111,665,140 (+)NCBI
NHGRI_mPanPan110111,646,561 - 111,670,460 (+)NCBI
Mhudiblu_PPA_v01096,349,235 - 96,373,147 (+)NCBI
PanPan1.11099,841,089 - 99,865,031 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008950779   ⟹   XP_008949027
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v28111,641,183 - 111,665,140 (+)NCBI
NHGRI_mPanPan110111,646,503 - 111,670,460 (+)NCBI
Mhudiblu_PPA_v01096,349,218 - 96,373,147 (+)NCBI
PanPan1.11099,841,102 - 99,865,029 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_003825506 (Get FASTA)   NCBI Sequence Viewer  
  XP_008949027 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000019993
  ENSPPAP00000019993.1
  ENSPPAP00000020000.1
RefSeq Acc Id: XP_003825506   ⟸   XM_003825458
- Peptide Label: isoform X1
- UniProtKB: A0A2R9AS42 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008949027   ⟸   XM_008950779
- Peptide Label: isoform X2
- UniProtKB: A0A2R9AS42 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSPPAP00000019993   ⟸   ENSPPAT00000042776
RefSeq Acc Id: ENSPPAP00000020000   ⟸   ENSPPAT00000042783


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000033196 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000042776.1 UniProtKB/TrEMBL
  ENSPPAT00000042783.1 UniProtKB/TrEMBL
Gene3D-CATH 3.20.20.380 UniProtKB/TrEMBL
InterPro Cu_homeostasis_CutC UniProtKB/TrEMBL
  CutC_dom_sf UniProtKB/TrEMBL
NCBI Gene CUTC ENTREZGENE
PANTHER COPPER HOMEOSTASIS PROTEIN CUTC HOMOLOG UniProtKB/TrEMBL
  PTHR12598 UniProtKB/TrEMBL
Pfam CutC UniProtKB/TrEMBL
Superfamily-SCOP SSF110395 UniProtKB/TrEMBL
UniProt A0A2R9AS42 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9AW20_PANPA UniProtKB/TrEMBL