BBLN (bublin coiled coil protein) - Rat Genome Database

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Gene: BBLN (bublin coiled coil protein) Pan paniscus
Analyze
Symbol: BBLN
Name: bublin coiled coil protein
RGD ID: 11802033
Description: ENCODES a protein that exhibits molecular adaptor activity (inferred); INVOLVED IN intermediate filament bundle assembly (inferred); ASSOCIATED WITH congenital disorder of glycosylation Iu (ortholog); developmental and epileptic encephalopathy (ortholog); developmental and epileptic encephalopathy 31A (ortholog); FOUND IN cell junction (inferred); intermediate filament (inferred); kinetochore microtubule (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: C9H9orf16; chromosome 9 C9orf16 homolog; chromosome 9 open reading frame, human C9orf16; UPF0184 protein C9orf16 homolog; UPF0184 protein C9orf16-like
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21111,188,647 - 11,192,389 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1911,190,995 - 11,194,693 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0999,281,258 - 99,284,930 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.19127,951,037 - 127,954,779 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl9127,951,037 - 127,954,779 (+)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

Genomics

Comparative Map Data
BBLN
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21111,188,647 - 11,192,389 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1911,190,995 - 11,194,693 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0999,281,258 - 99,284,930 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.19127,951,037 - 127,954,779 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl9127,951,037 - 127,954,779 (+)Ensemblpanpan1.1panPan2
BBLN
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh389128,160,265 - 128,163,924 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl9128,160,265 - 128,163,924 (+)EnsemblGRCh38hg38GRCh38
GRCh379130,922,544 - 130,926,203 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 369129,962,360 - 129,966,028 (+)NCBINCBI36Build 36hg18NCBI36
Build 349128,002,188 - 128,005,756NCBI
Celera9101,573,422 - 101,577,094 (+)NCBICelera
Cytogenetic Map9q34.11NCBI
HuRef9100,536,165 - 100,539,842 (+)NCBIHuRef
CHM1_19131,073,538 - 131,077,222 (+)NCBICHM1_1
T2T-CHM13v2.09140,367,336 - 140,371,004 (+)NCBIT2T-CHM13v2.0
Bbln
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39232,269,120 - 32,271,877 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl232,267,109 - 32,271,950 (-)EnsemblGRCm39 Ensembl
GRCm38232,379,101 - 32,381,915 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl232,377,097 - 32,381,938 (-)EnsemblGRCm38mm10GRCm38
MGSCv37232,234,621 - 32,237,435 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36232,201,117 - 32,203,893 (-)NCBIMGSCv36mm8
Celera232,084,510 - 32,087,324 (-)NCBICelera
Cytogenetic Map2BNCBI
cM Map222.09NCBI
Bbln
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8336,072,325 - 36,075,070 (-)NCBIGRCr8
mRatBN7.2315,674,577 - 15,677,322 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl315,674,580 - 15,677,374 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx318,743,395 - 18,746,140 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0327,328,389 - 27,331,134 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0325,579,249 - 25,581,994 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0311,408,076 - 11,410,907 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl311,408,348 - 11,410,732 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0316,756,949 - 16,759,766 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4311,505,289 - 11,508,067 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera310,417,463 - 10,420,299 (-)NCBICelera
Cytogenetic Map3p12NCBI
Bbln
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955570708,747 - 712,573 (+)EnsemblChiLan1.0
ChiLan1.0NW_004955570709,009 - 712,573 (+)NCBIChiLan1.0ChiLan1.0
BBLN
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1955,319,943 - 55,323,429 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl955,319,952 - 55,323,609 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha954,514,712 - 54,518,191 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0956,242,129 - 56,245,618 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl956,242,138 - 56,245,573 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1955,001,995 - 55,005,474 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0955,316,714 - 55,320,191 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0955,408,405 - 55,411,894 (-)NCBIUU_Cfam_GSD_1.0
Bbln
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947195,960,249 - 195,963,538 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493648715,728,778 - 15,732,065 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493648715,728,776 - 15,732,065 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
BBLN
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.11268,616,040 - 268,619,638 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21302,606,324 - 302,610,207 (+)NCBISscrofa10.2Sscrofa10.2susScr3
BBLN
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1129,965,505 - 9,969,443 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660796,263,521 - 6,267,529 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Bbln
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247606,672,541 - 6,676,216 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247606,672,541 - 6,676,186 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_003822319 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JARIFH020000011 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSPPAT00000029543   ⟹   ENSPPAP00000007308
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl9127,951,037 - 127,954,779 (+)Ensembl
RefSeq Acc Id: XM_003822319   ⟹   XP_003822367
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21111,188,647 - 11,192,389 (-)NCBI
NHGRI_mPanPan1911,190,995 - 11,194,693 (-)NCBI
Mhudiblu_PPA_v0999,281,258 - 99,284,930 (+)NCBI
PanPan1.19127,951,037 - 127,954,779 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_003822367 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000007308
  ENSPPAP00000007308.1
Reference Protein Sequences
RefSeq Acc Id: XP_003822367   ⟸   XM_003822319
- UniProtKB: A0A2R8ZRZ8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSPPAP00000007308   ⟸   ENSPPAT00000029543


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000026511 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000029543.1 UniProtKB/TrEMBL
InterPro BBLN_eukaryota UniProtKB/TrEMBL
KEGG Report pps:100971368 UniProtKB/TrEMBL
NCBI Gene C9H9orf16 ENTREZGENE
PANTHER BUBLIN COILED-COIL PROTEIN UniProtKB/TrEMBL
  PTHR34344 UniProtKB/TrEMBL
Pfam UPF0184 UniProtKB/TrEMBL
UniProt A0A2R8ZRZ8 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-12-15 BBLN  bublin coiled coil protein  C9H9orf16  chromosome 9 C9orf16 homolog  Symbol and/or name change 5135510 APPROVED
2018-05-08 C9H9orf16  chromosome 9 C9orf16 homolog    chromosome 9 open reading frame, human C9orf16  Symbol and/or name change 5135510 APPROVED