ETNK1 (ethanolamine kinase 1) - Rat Genome Database

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Gene: ETNK1 (ethanolamine kinase 1) Pan paniscus
Analyze
Symbol: ETNK1
Name: ethanolamine kinase 1
RGD ID: 11800259
Description: ENCODES a protein that exhibits ethanolamine kinase activity (inferred); INVOLVED IN phosphatidylethanolamine biosynthetic process (inferred); ASSOCIATED WITH genetic disease (ortholog); juvenile rheumatoid arthritis (ortholog); teratoma (ortholog); FOUND IN cytoplasm (inferred); membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21074,127,774 - 74,195,009 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11274,124,173 - 74,191,411 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01263,623,723 - 63,690,306 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11266,231,860 - 66,297,223 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1266,237,566 - 66,297,223 (-)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IEA)
membrane  (IEA)

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
ETNK1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21074,127,774 - 74,195,009 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11274,124,173 - 74,191,411 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01263,623,723 - 63,690,306 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11266,231,860 - 66,297,223 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1266,237,566 - 66,297,223 (-)Ensemblpanpan1.1panPan2
ETNK1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381222,625,171 - 22,690,665 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1222,625,075 - 22,690,665 (+)EnsemblGRCh38hg38GRCh38
GRCh371222,778,105 - 22,843,599 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361222,669,343 - 22,734,875 (+)NCBINCBI36Build 36hg18NCBI36
Build 341222,669,275 - 22,729,910NCBI
Celera1227,925,902 - 27,991,433 (+)NCBICelera
Cytogenetic Map12p12.1NCBI
HuRef1222,544,416 - 22,609,945 (+)NCBIHuRef
CHM1_11222,743,111 - 22,808,624 (+)NCBICHM1_1
T2T-CHM13v2.01222,496,636 - 22,562,113 (+)NCBIT2T-CHM13v2.0
Etnk1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm396143,112,592 - 143,154,272 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl6143,112,947 - 143,178,033 (+)EnsemblGRCm39 Ensembl
GRCm386143,166,866 - 143,208,546 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl6143,167,221 - 143,232,307 (+)EnsemblGRCm38mm10GRCm38
MGSCv376143,115,750 - 143,157,066 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv366143,113,385 - 143,165,768 (+)NCBIMGSCv36mm8
Celera6146,223,422 - 146,264,838 (+)NCBICelera
Cytogenetic Map6G3NCBI
cM Map675.41NCBI
Etnk1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr84177,857,001 - 177,901,278 (+)NCBIGRCr8
mRatBN7.24176,126,056 - 176,170,325 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl4176,126,180 - 176,193,770 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx4182,421,196 - 182,465,330 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.04178,205,471 - 178,249,606 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.04176,826,054 - 176,870,189 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.04177,402,904 - 177,447,047 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4177,402,904 - 177,447,028 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04241,606,529 - 241,650,672 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44181,060,600 - 181,104,724 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.14181,305,698 - 181,375,929 (+)NCBI
Celera4164,656,894 - 164,701,064 (+)NCBICelera
Cytogenetic Map4q44NCBI
Etnk1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541318,036,646 - 18,089,370 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495541318,036,646 - 18,094,875 (+)NCBIChiLan1.0ChiLan1.0
ETNK1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12724,561,708 - 24,624,794 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2724,567,318 - 24,624,797 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2721,737,309 - 21,800,235 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02724,771,667 - 24,834,600 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2724,771,674 - 24,834,755 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12724,575,789 - 24,638,718 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02724,600,684 - 24,663,605 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02721,908,620 - 21,971,582 (+)NCBIUU_Cfam_GSD_1.0
Etnk1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494586,417,239 - 86,482,994 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365484,345,021 - 4,405,879 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365484,340,632 - 4,405,880 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ETNK1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl550,914,814 - 50,970,697 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1550,914,808 - 50,970,748 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
ETNK1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11122,442,523 - 22,506,200 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1122,442,649 - 22,500,510 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366606912,638,908 - 12,703,273 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Etnk1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475216,139,202 - 16,196,389 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475216,134,295 - 16,196,406 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSPPAT00000059866   ⟹   ENSPPAP00000036970
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1266,237,566 - 66,297,223 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000059871   ⟹   ENSPPAP00000036975
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1266,277,915 - 66,297,151 (-)Ensembl
RefSeq Acc Id: XM_003828882   ⟹   XP_003828930
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21074,127,774 - 74,195,003 (-)NCBI
NHGRI_mPanPan11274,124,173 - 74,191,400 (-)NCBI
Mhudiblu_PPA_v01263,623,723 - 63,689,887 (-)NCBI
PanPan1.11266,231,860 - 66,297,223 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008954315   ⟹   XP_008952563
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21074,168,081 - 74,195,009 (-)NCBI
NHGRI_mPanPan11274,170,366 - 74,191,411 (-)NCBI
Mhudiblu_PPA_v01263,669,920 - 63,690,306 (-)NCBI
PanPan1.11266,277,915 - 66,297,151 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_003828930 (Get FASTA)   NCBI Sequence Viewer  
  XP_008952563 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000036970
  ENSPPAP00000036970.1
  ENSPPAP00000036975.1
Reference Protein Sequences
RefSeq Acc Id: XP_003828930   ⟸   XM_003828882
- Peptide Label: isoform X1
- UniProtKB: A0A2R9C4W0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008952563   ⟸   XM_008954315
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: ENSPPAP00000036970   ⟸   ENSPPAT00000059866
RefSeq Acc Id: ENSPPAP00000036975   ⟸   ENSPPAT00000059871


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000041246 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000059866.1 UniProtKB/TrEMBL
  ENSPPAT00000059871.1 UniProtKB/TrEMBL
Gene3D-CATH 3.90.1200.10 UniProtKB/TrEMBL
InterPro Kinase-like_dom_sf UniProtKB/TrEMBL
KEGG Report pps:100968782 UniProtKB/TrEMBL
NCBI Gene ETNK1 ENTREZGENE
PANTHER CHOLINE/ETHANOALAMINE KINASE UniProtKB/TrEMBL
  ETHANOLAMINE KINASE 1 UniProtKB/TrEMBL
Pfam Choline_kinase UniProtKB/TrEMBL
Superfamily-SCOP SSF56112 UniProtKB/TrEMBL
UniProt A0A2R9C4W0 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9C4W4_PANPA UniProtKB/TrEMBL