HS3ST5 (heparan sulfate-glucosamine 3-sulfotransferase 5) - Rat Genome Database

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Gene: HS3ST5 (heparan sulfate-glucosamine 3-sulfotransferase 5) Pan paniscus
Analyze
Symbol: HS3ST5
Name: heparan sulfate-glucosamine 3-sulfotransferase 5
RGD ID: 11799641
Description: ENCODES a protein that exhibits [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity (ortholog); INVOLVED IN heparan sulfate proteoglycan biosynthetic process, enzymatic modification (ortholog); negative regulation of coagulation (ortholog); protein sulfation (ortholog); ASSOCIATED WITH body dysmorphic disorder (ortholog); melanoma (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: heparan sulfate glucosamine 3-O-sulfotransferase 5
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.16115,917,004 - 116,202,924 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl6115,917,004 - 116,089,942 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v06111,846,143 - 112,132,706 (-)NCBIMhudiblu_PPA_v0panPan3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Function

References

Genomics

Comparative Map Data
HS3ST5
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.16115,917,004 - 116,202,924 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl6115,917,004 - 116,089,942 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v06111,846,143 - 112,132,706 (-)NCBIMhudiblu_PPA_v0panPan3
HS3ST5
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl6114,055,596 - 114,343,023 (-)EnsemblGRCh38hg38GRCh38
GRCh386114,055,586 - 114,343,023 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh376114,376,760 - 114,664,187 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 366114,485,114 - 114,490,702 (-)NCBINCBI36hg18NCBI36
Build 346114,485,113 - 114,490,702NCBI
Celera6115,118,158 - 115,125,449 (-)NCBI
Cytogenetic Map6q21-q22.1NCBI
HuRef6111,953,620 - 111,960,911 (-)NCBIHuRef
CHM1_16114,639,638 - 114,646,928 (-)NCBICHM1_1
Hs3st5
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391036,382,794 - 36,710,393 (+)NCBIGRCm39mm39
GRCm39 Ensembl1036,382,810 - 36,710,393 (+)Ensembl
GRCm381036,506,590 - 36,834,397 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1036,506,814 - 36,834,397 (+)EnsemblGRCm38mm10GRCm38
MGSCv371036,226,613 - 36,554,203 (+)NCBIGRCm37mm9NCBIm37
MGSCv361036,196,223 - 36,523,813 (+)NCBImm8
Celera1037,409,543 - 37,736,930 (+)NCBICelera
Cytogenetic Map10B1NCBI
Hs3st5
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.22040,106,876 - 40,417,661 (+)NCBI
Rnor_6.0 Ensembl2040,236,437 - 40,545,494 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.02040,236,437 - 40,545,502 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.02041,969,878 - 42,279,758 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42040,711,763 - 41,022,773 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12041,039,793 - 41,044,941 (+)NCBI
Celera2040,863,898 - 41,173,368 (+)NCBICelera
Cytogenetic Map20q12NCBI
Hs3st5
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555262,636,579 - 2,652,405 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555262,418,217 - 2,652,025 (+)NCBIChiLan1.0ChiLan1.0
HS3ST5
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11270,137,232 - 70,387,797 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1270,140,802 - 70,388,174 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1269,884,392 - 70,134,790 (-)NCBI
ROS_Cfam_1.01271,019,134 - 71,268,571 (-)NCBI
UMICH_Zoey_3.11270,370,842 - 70,620,669 (-)NCBI
UNSW_CanFamBas_1.01270,209,266 - 70,461,102 (-)NCBI
UU_Cfam_GSD_1.01270,540,322 - 70,791,458 (-)NCBI
Hs3st5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404946105,308,246 - 105,505,241 (-)NCBI
SpeTri2.0NW_0049366792,540,894 - 2,737,462 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
HS3ST5
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl179,955,657 - 80,243,797 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1179,956,485 - 80,140,140 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2190,017,049 - 90,306,175 (-)NCBISscrofa10.2Sscrofa10.2susScr3
HS3ST5
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11359,486,748 - 59,774,673 (+)NCBI
ChlSab1.1 Ensembl1359,598,298 - 59,774,953 (+)Ensembl
Vero_WHO_p1.0NW_02366604031,859,012 - 32,137,822 (+)NCBI
Hs3st5
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248564,403,071 - 4,689,535 (+)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSPPAT00000030076   ⟹   ENSPPAP00000007587
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl6115,917,004 - 115,958,383 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000030084   ⟹   ENSPPAP00000007592
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl6115,918,672 - 116,089,942 (-)Ensembl
RefSeq Acc Id: XM_014345452   ⟹   XP_014200938
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.16115,917,004 - 116,202,089 (-)NCBI
Mhudiblu_PPA_v06111,846,143 - 112,131,252 (-)NCBI
Sequence:
RefSeq Acc Id: XM_034962726   ⟹   XP_034818617
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v06111,846,143 - 112,132,706 (-)NCBI
RefSeq Acc Id: XM_034962727   ⟹   XP_034818618
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v06111,846,143 - 112,068,277 (-)NCBI
RefSeq Acc Id: XM_034962728   ⟹   XP_034818619
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v06111,846,143 - 112,132,706 (-)NCBI
RefSeq Acc Id: XM_034962729   ⟹   XP_034818620
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v06111,846,143 - 112,132,706 (-)NCBI
RefSeq Acc Id: XM_034962730   ⟹   XP_034818621
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v06111,846,143 - 112,132,706 (-)NCBI
RefSeq Acc Id: XM_034962731   ⟹   XP_034818622
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v06111,846,143 - 111,899,296 (-)NCBI
Reference Sequences
RefSeq Acc Id: XP_014200938   ⟸   XM_014345452
- Sequence:
RefSeq Acc Id: XP_034818621   ⟸   XM_034962730
RefSeq Acc Id: XP_034818617   ⟸   XM_034962726
RefSeq Acc Id: XP_034818619   ⟸   XM_034962728
RefSeq Acc Id: XP_034818620   ⟸   XM_034962729
RefSeq Acc Id: XP_034818618   ⟸   XM_034962727
RefSeq Acc Id: XP_034818622   ⟸   XM_034962731
RefSeq Acc Id: ENSPPAP00000007587   ⟸   ENSPPAT00000030076
RefSeq Acc Id: ENSPPAP00000007592   ⟸   ENSPPAT00000030084
Protein Domains
Sulfotransfer_1


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000026905 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSPPAP00000007587 UniProtKB/TrEMBL
  ENSPPAP00000007592 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000030076 UniProtKB/TrEMBL
  ENSPPAT00000030084 UniProtKB/TrEMBL
InterPro NST/OST UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/TrEMBL
  Sulfotransferase_dom UniProtKB/TrEMBL
KEGG Report pps:100979280 UniProtKB/TrEMBL
NCBI Gene HS3ST5 ENTREZGENE
PANTHER PTHR10605 UniProtKB/TrEMBL
Pfam Sulfotransfer_1 UniProtKB/TrEMBL
Superfamily-SCOP SSF52540 UniProtKB/TrEMBL
UniProt A0A2R8ZRJ5_PANPA UniProtKB/TrEMBL