TSTD1 (thiosulfate sulfurtransferase like domain containing 1) - Rat Genome Database

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Gene: TSTD1 (thiosulfate sulfurtransferase like domain containing 1) Pan paniscus
Analyze
Symbol: TSTD1
Name: thiosulfate sulfurtransferase like domain containing 1
RGD ID: 11790322
Description: ENCODES a protein that exhibits thiosulfate-thiol sulfurtransferase activity (inferred); INVOLVED IN sulfide oxidation, using sulfide:quinone oxidoreductase (inferred); ASSOCIATED WITH autoimmune interstitial lung, joint, and kidney disease (ortholog); gastrointestinal stromal tumor (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (inferred); cytoplasmic ribonucleoprotein granule (inferred); cytosol (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: LOC117976019; thiosulfate sulfurtransferase/rhodanese-like domain-containing protein 1; thiosulfate:glutathione sulfurtransferase
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2188,821,316 - 88,822,807 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1188,503,088 - 88,504,594 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01136,441,679 - 136,443,213 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11140,363,881 - 140,365,259 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1140,363,881 - 140,365,295 (-)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
TSTD1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2188,821,316 - 88,822,807 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1188,503,088 - 88,504,594 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01136,441,679 - 136,443,213 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11140,363,881 - 140,365,259 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1140,363,881 - 140,365,295 (-)Ensemblpanpan1.1panPan2
TSTD1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381161,037,631 - 161,038,964 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1161,037,631 - 161,038,977 (-)EnsemblGRCh38hg38GRCh38
GRCh371161,007,421 - 161,008,754 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361159,274,042 - 159,275,372 (-)NCBINCBI36Build 36hg18NCBI36
Celera1134,074,692 - 134,076,045 (-)NCBICelera
Cytogenetic Map1q23.3NCBI
HuRef1132,365,360 - 132,366,713 (-)NCBIHuRef
CHM1_11162,403,594 - 162,404,947 (-)NCBICHM1_1
T2T-CHM13v2.01160,175,138 - 160,176,471 (-)NCBIT2T-CHM13v2.0
Tstd1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391171,246,601 - 171,247,920 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1171,246,440 - 171,247,920 (+)EnsemblGRCm39 Ensembl
GRCm381171,419,033 - 171,420,352 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1171,418,872 - 171,420,352 (+)EnsemblGRCm38mm10GRCm38
MGSCv371173,349,164 - 173,350,483 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361173,254,765 - 173,257,029 (+)NCBIMGSCv36mm8
Celera1173,870,402 - 173,871,721 (+)NCBICelera
Cytogenetic Map1H3NCBI
cM Map179.41NCBI
Tstd1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81386,385,679 - 86,387,315 (+)NCBIGRCr8
mRatBN7.21383,853,421 - 83,854,875 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1383,822,035 - 83,854,885 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.01389,805,652 - 89,807,355 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1389,805,962 - 89,807,243 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01394,433,197 - 94,434,890 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41387,344,867 - 87,346,258 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1383,483,762 - 83,485,465 (+)NCBICelera
Cytogenetic Map13q24NCBI
Tstd1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495546812,813,116 - 12,814,226 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495546812,813,116 - 12,814,651 (-)NCBIChiLan1.0ChiLan1.0
TSTD1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13821,419,306 - 21,421,428 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3821,419,346 - 21,421,427 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3821,493,224 - 21,495,205 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03821,536,929 - 21,538,747 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3821,536,962 - 21,538,746 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13821,425,030 - 21,427,049 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03821,838,922 - 21,840,925 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03822,248,248 - 22,250,289 (+)NCBIUU_Cfam_GSD_1.0
Tstd1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244050587,142,237 - 7,143,652 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936903350,927 - 352,461 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936903350,895 - 352,302 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TSTD1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl489,401,159 - 89,403,277 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1489,401,320 - 89,402,741 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2497,371,109 - 97,372,520 (-)NCBISscrofa10.2Sscrofa10.2susScr3
TSTD1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1202,950,536 - 2,952,100 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660381,988,375 - 1,989,758 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Tstd1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624794325,255 - 326,736 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSPPAT00000018819   ⟹   ENSPPAP00000004047
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1140,363,881 - 140,365,295 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000018848   ⟹   ENSPPAP00000004052
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1140,363,881 - 140,365,257 (-)Ensembl
RefSeq Acc Id: XM_003811860   ⟹   XP_003811908
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2188,821,316 - 88,822,807 (+)NCBI
NHGRI_mPanPan1188,503,088 - 88,504,594 (+)NCBI
Mhudiblu_PPA_v01136,441,679 - 136,443,213 (-)NCBI
PanPan1.11140,363,881 - 140,365,259 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008964251   ⟹   XP_008962499
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2188,821,316 - 88,822,800 (+)NCBI
NHGRI_mPanPan1188,503,088 - 88,504,586 (+)NCBI
Mhudiblu_PPA_v01136,441,679 - 136,443,213 (-)NCBI
PanPan1.11140,363,881 - 140,365,241 (-)NCBI
Sequence:
RefSeq Acc Id: XM_063604349   ⟹   XP_063460419
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2188,821,316 - 88,822,807 (+)NCBI
Protein Sequences
Protein RefSeqs XP_003811908 (Get FASTA)   NCBI Sequence Viewer  
  XP_008962499 (Get FASTA)   NCBI Sequence Viewer  
  XP_063460419 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000004047
  ENSPPAP00000004047.1
  ENSPPAP00000004052.1
Reference Protein Sequences
RefSeq Acc Id: XP_003811908   ⟸   XM_003811860
- Peptide Label: isoform X1
- UniProtKB: A0A2R8ZJM3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008962499   ⟸   XM_008964251
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: ENSPPAP00000004047   ⟸   ENSPPAT00000018819
RefSeq Acc Id: ENSPPAP00000004052   ⟸   ENSPPAT00000018848
RefSeq Acc Id: XP_063460419   ⟸   XM_063604349
- Peptide Label: isoform X2
Protein Domains
Rhodanese


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000017175 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000018819.1 UniProtKB/TrEMBL
  ENSPPAT00000018848.1 UniProtKB/TrEMBL
Gene3D-CATH 3.40.250.10 UniProtKB/TrEMBL
InterPro Rhodanese-like_dom UniProtKB/TrEMBL
  Rhodanese-like_dom_sf UniProtKB/TrEMBL
  TSTD1_mammal UniProtKB/TrEMBL
NCBI Gene TSTD1 ENTREZGENE
PANTHER PTHR45544 UniProtKB/TrEMBL
  THIOSULFATE:GLUTATHIONE SULFURTRANSFERASE UniProtKB/TrEMBL
Pfam Rhodanese UniProtKB/TrEMBL
PROSITE RHODANESE_3 UniProtKB/TrEMBL
SMART RHOD UniProtKB/TrEMBL
Superfamily-SCOP SSF52821 UniProtKB/TrEMBL
UniProt A0A2R8ZJM3 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R8ZJM8_PANPA UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2023-04-20 TSTD1  thiosulfate sulfurtransferase like domain containing 1  LOC117976019  thiosulfate:glutathione sulfurtransferase  Data merged from RGD:32731652 737654 PROVISIONAL