AOX1 (aldehyde oxidase 1) - Rat Genome Database

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Gene: AOX1 (aldehyde oxidase 1) Pan paniscus
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Symbol: AOX1
Name: aldehyde oxidase 1
RGD ID: 11785474
Description: ENCODES a protein that exhibits 2 iron, 2 sulfur cluster binding (ortholog); aldehyde oxidase activity (ortholog); flavin adenine dinucleotide binding (ortholog); INVOLVED IN xenobiotic metabolic process (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); Neurodevelopmental Disorders (ortholog); Prostatic Neoplasms (ortholog); FOUND IN cytosol (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: aldehyde oxidase
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.12B205,996,604 - 206,083,897 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B205,996,604 - 206,083,897 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v02B87,839,376 - 87,924,823 (+)NCBIMhudiblu_PPA_v0panPan3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytosol  (ISO)

References

Genomics

Comparative Map Data
AOX1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.12B205,996,604 - 206,083,897 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B205,996,604 - 206,083,897 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v02B87,839,376 - 87,924,823 (+)NCBIMhudiblu_PPA_v0panPan3
AOX1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl2200,586,014 - 200,677,064 (+)EnsemblGRCh38hg38GRCh38
GRCh382200,585,952 - 200,677,064 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh372201,450,737 - 201,536,218 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362201,158,976 - 201,244,463 (+)NCBINCBI36hg18NCBI36
Build 342201,276,043 - 201,361,720NCBI
Celera2195,205,613 - 195,291,094 (+)NCBI
Cytogenetic Map2q33.1NCBI
HuRef2193,302,067 - 193,387,763 (+)NCBIHuRef
CHM1_12201,456,717 - 201,542,113 (+)NCBICHM1_1
Aox1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39158,068,963 - 58,145,569 (+)NCBIGRCm39mm39
GRCm39 Ensembl158,069,090 - 58,145,572 (+)Ensembl
GRCm38158,029,809 - 58,106,410 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl158,029,931 - 58,106,413 (+)EnsemblGRCm38mm10GRCm38
MGSCv37158,086,813 - 58,163,254 (+)NCBIGRCm37mm9NCBIm37
MGSCv36157,974,550 - 58,050,959 (+)NCBImm8
Celera158,543,669 - 58,620,236 (+)NCBICelera
Cytogenetic Map1C1.3NCBI
cM Map128.86NCBI
Aox1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2959,579,621 - 59,658,772 (+)NCBImRatBN7.2
mRatBN7.2 Ensembl959,579,649 - 59,658,770 (+)Ensembl
Rnor_6.0964,929,682 - 65,007,872 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl964,929,721 - 65,007,870 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0964,726,609 - 64,804,786 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4956,693,698 - 56,774,115 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1956,840,679 - 56,921,097 (+)NCBI
Celera957,025,110 - 57,102,310 (+)NCBICelera
Cytogenetic Map9q31NCBI
Aox1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955403828,066 - 872,218 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955403827,538 - 875,856 (-)NCBIChiLan1.0ChiLan1.0
AOX2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1379,912,731 - 9,992,322 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl379,913,675 - 9,992,319 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3710,799,110 - 10,877,517 (+)NCBI
ROS_Cfam_1.0379,818,121 - 9,897,733 (+)NCBI
UMICH_Zoey_3.1379,800,648 - 9,879,251 (+)NCBI
UNSW_CanFamBas_1.0379,778,952 - 9,857,094 (+)NCBI
UU_Cfam_GSD_1.0379,772,362 - 9,850,965 (+)NCBI
Aox1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405303157,695,152 - 157,763,851 (+)NCBI
SpeTri2.0NW_004936825263,725 - 332,424 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
AOX1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl15104,153,702 - 104,238,400 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.115104,157,748 - 104,234,533 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.215115,429,739 - 115,506,114 (+)NCBISscrofa10.2Sscrofa10.2susScr3


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_003820713 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide SSBP01000166 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSPPAT00000000868   ⟹   ENSPPAP00000000241
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl2B205,996,604 - 206,083,897 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000000903   ⟹   ENSPPAP00000000256
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl2B206,001,656 - 206,083,081 (+)Ensembl
RefSeq Acc Id: XM_003820713   ⟹   XP_003820761
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.12B205,996,604 - 206,083,897 (+)NCBI
Mhudiblu_PPA_v02B87,839,376 - 87,924,823 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_003820761 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_003820761   ⟸   XM_003820713
- Sequence:
RefSeq Acc Id: ENSPPAP00000000241   ⟸   ENSPPAT00000000868
RefSeq Acc Id: ENSPPAP00000000256   ⟸   ENSPPAT00000000903


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000000241 Ensembl, ENTREZGENE
NCBI Gene AOX1 ENTREZGENE