MPO (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 19 | 74,441,104 - 74,453,615 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 17 | 79,252,255 - 79,263,874 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 17 | 52,333,882 - 52,357,838 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 17 | 57,189,654 - 57,212,111 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 17 | 57,201,073 - 57,212,111 (-) | Ensembl | panpan1.1 | | panPan2 | |
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MPO (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 17 | 58,269,855 - 58,280,935 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 17 | 58,269,855 - 58,280,935 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 17 | 56,347,216 - 56,358,296 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 17 | 53,702,216 - 53,713,295 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 17 | 53,702,215 - 53,713,295 | NCBI | | | | | Celera | 17 | 52,808,995 - 52,820,066 (-) | NCBI | | Celera | | | Cytogenetic Map | 17 | q22 | NCBI | | | | | HuRef | 17 | 51,708,013 - 51,718,966 (-) | NCBI | | HuRef | | | CHM1_1 | 17 | 56,412,238 - 56,423,315 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 17 | 59,137,736 - 59,148,814 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Mpo (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 11 | 87,684,610 - 87,695,238 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 11 | 87,684,407 - 87,695,239 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 11 | 87,793,784 - 87,804,412 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 11 | 87,793,581 - 87,804,413 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 11 | 87,607,286 - 87,617,914 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 11 | 87,609,776 - 87,620,592 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 11 | 97,389,547 - 97,400,150 (+) | NCBI | | Celera | | | Cytogenetic Map | 11 | C | NCBI | | | | | cM Map | 11 | 52.22 | NCBI | | | | |
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Mpo (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 10 | 73,092,124 - 73,102,057 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 10 | 72,594,883 - 72,608,862 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 10 | 72,594,661 - 72,604,819 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 10 | 77,205,622 - 77,215,277 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 10 | 76,710,570 - 76,720,225 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 10 | 72,175,076 - 72,184,731 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 10 | 75,087,892 - 75,098,260 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 10 | 75,087,892 - 75,098,260 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 10 | 75,004,128 - 75,014,496 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 10 | 76,085,872 - 76,097,012 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | Celera | 10 | 71,507,771 - 71,517,382 (+) | NCBI | | Celera | | | Cytogenetic Map | 10 | q26 | NCBI | | | | |
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Mpo (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955451 | 4,743,744 - 4,753,358 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955451 | 4,743,744 - 4,753,358 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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MPO (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 9 | 32,927,483 - 32,938,007 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 9 | 32,927,483 - 32,937,820 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 9 | 32,164,643 - 32,175,070 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 9 | 33,734,267 - 33,744,696 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 9 | 33,734,273 - 33,744,637 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 9 | 32,520,407 - 32,530,846 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 9 | 32,803,860 - 32,814,324 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 9 | 32,897,366 - 32,907,792 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Mpo (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024405602 | 32,254,998 - 32,265,476 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936490 | 4,809,631 - 4,819,070 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936490 | 4,809,773 - 4,819,070 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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MPO (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 12 | 34,556,408 - 34,567,904 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 12 | 34,557,031 - 34,570,091 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 12 | 36,245,391 - 36,256,372 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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MPO (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 16 | 35,120,194 - 35,130,851 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 16 | 35,120,581 - 35,130,671 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666077 | 5,935,107 - 5,946,375 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Mpo (Heterocephalus glaber - naked mole-rat) |
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