EVX2 (even-skipped homeobox 2) - Rat Genome Database

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Gene: EVX2 (even-skipped homeobox 2) Pan paniscus
Analyze
Symbol: EVX2
Name: even-skipped homeobox 2
RGD ID: 11779768
Description: ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN limb morphogenesis (ortholog); ASSOCIATED WITH genetic disease (ortholog); split hand-foot malformation 5 (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: homeobox even-skipped homolog protein 2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21378,745,037 - 78,752,561 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12B78,760,013 - 78,767,481 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02B63,359,892 - 63,364,762 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12B181,069,133 - 181,073,347 (-)NCBIpanpan1.1PanPan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
EVX2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21378,745,037 - 78,752,561 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12B78,760,013 - 78,767,481 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02B63,359,892 - 63,364,762 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12B181,069,133 - 181,073,347 (-)NCBIpanpan1.1PanPan1.1panPan2
EVX2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382176,077,472 - 176,083,962 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2176,077,472 - 176,083,962 (-)EnsemblGRCh38hg38GRCh38
GRCh372176,942,200 - 176,948,690 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362176,653,081 - 176,656,936 (-)NCBINCBI36Build 36hg18NCBI36
Celera2170,553,985 - 170,557,840 (-)NCBICelera
Cytogenetic Map2q31.1NCBI
HuRef2168,822,321 - 168,826,177 (-)NCBIHuRef
CHM1_12176,950,682 - 176,954,537 (-)NCBICHM1_1
T2T-CHM13v2.02176,565,581 - 176,572,075 (-)NCBIT2T-CHM13v2.0
Evx2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39274,483,333 - 74,491,864 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl274,483,335 - 74,489,901 (-)EnsemblGRCm39 Ensembl
GRCm38274,652,989 - 74,661,520 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl274,652,991 - 74,659,557 (-)EnsemblGRCm38mm10GRCm38
MGSCv37274,493,673 - 74,497,476 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36274,456,455 - 74,460,258 (-)NCBIMGSCv36mm8
Celera276,325,721 - 76,329,525 (-)NCBICelera
Cytogenetic Map2C3NCBI
cM Map244.13NCBI
Evx2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8379,965,630 - 79,969,700 (-)NCBIGRCr8
mRatBN7.2359,558,197 - 59,562,267 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl359,558,197 - 59,561,872 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.0361,564,917 - 61,581,598 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl361,578,229 - 61,581,598 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0368,032,231 - 68,048,055 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4357,262,625 - 57,274,916 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1357,166,866 - 57,172,821 (-)NCBI
Celera359,080,928 - 59,084,154 (-)NCBICelera
Cytogenetic Map3q23NCBI
Evx2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540320,578,813 - 20,582,409 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540320,578,813 - 20,582,409 (+)NCBIChiLan1.0ChiLan1.0
EVX2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13619,887,095 - 19,891,772 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3619,887,524 - 19,891,247 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3619,897,402 - 19,901,132 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03620,028,549 - 20,032,283 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3620,028,549 - 20,032,913 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13620,102,621 - 20,106,351 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03620,103,583 - 20,107,304 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03620,215,301 - 20,219,023 (-)NCBIUU_Cfam_GSD_1.0
Evx2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405303137,010,758 - 137,017,688 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365095,566,432 - 5,571,005 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365095,566,432 - 5,571,005 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
EVX2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1581,881,362 - 81,885,193 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11581,881,362 - 81,884,994 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21591,345,989 - 91,354,707 (-)NCBISscrofa10.2Sscrofa10.2susScr3
EVX2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11061,650,763 - 61,659,724 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1061,654,829 - 61,658,494 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666040137,951,216 - 137,955,814 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Evx2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462478713,221,382 - 13,224,978 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462478713,221,382 - 13,224,989 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_034953841 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JARIFH020000013 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: XM_034953841   ⟹   XP_034809732
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21378,745,037 - 78,752,561 (-)NCBI
NHGRI_mPanPan12B78,760,013 - 78,767,481 (-)NCBI
Mhudiblu_PPA_v02B63,359,892 - 63,364,762 (-)NCBI
Protein Sequences
Protein RefSeqs XP_034809732 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_034809732   ⟸   XM_034953841


Additional Information

Database Acc Id Source(s)
NCBI Gene EVX2 ENTREZGENE