IL27RA (interleukin 27 receptor subunit alpha) - Rat Genome Database

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Gene: IL27RA (interleukin 27 receptor subunit alpha) Pan paniscus
Analyze
Symbol: IL27RA
Name: interleukin 27 receptor subunit alpha
RGD ID: 11779436
Description: ENCODES a protein that exhibits interleukin-27 receptor activity (inferred); INVOLVED IN defense response to Gram-positive bacterium (ortholog); negative regulation of type 2 immune response (ortholog); positive regulation of T-helper 1 type immune response (ortholog); PARTICIPATES IN interleukin-27 signaling pathway; ASSOCIATED WITH asthma (ortholog); genetic disease (ortholog); pneumoconiosis (ortholog); FOUND IN membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: interleukin-27 receptor subunit alpha
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22018,960,949 - 18,982,615 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11917,961,963 - 17,983,593 (+)NCBINHGRI_mPanPan1
PanPan1.11914,323,618 - 14,343,636 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1914,323,618 - 14,343,627 (+)Ensemblpanpan1.1panPan2


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
membrane  (IEA)

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
IL27RA
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22018,960,949 - 18,982,615 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11917,961,963 - 17,983,593 (+)NCBINHGRI_mPanPan1
PanPan1.11914,323,618 - 14,343,636 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1914,323,618 - 14,343,627 (+)Ensemblpanpan1.1panPan2
IL27RA
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381914,031,762 - 14,053,218 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1914,031,762 - 14,053,218 (+)EnsemblGRCh38hg38GRCh38
GRCh371914,142,574 - 14,164,030 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361914,003,262 - 14,025,026 (+)NCBINCBI36Build 36hg18NCBI36
Build 341914,003,261 - 14,025,026NCBI
Celera1914,036,058 - 14,057,825 (+)NCBICelera
Cytogenetic Map19p13.12NCBI
HuRef1913,714,538 - 13,735,786 (+)NCBIHuRef
CHM1_11914,143,096 - 14,164,322 (+)NCBICHM1_1
T2T-CHM13v2.01914,158,051 - 14,179,508 (+)NCBIT2T-CHM13v2.0
Il27ra
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39884,756,915 - 84,769,250 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl884,756,923 - 84,769,218 (-)EnsemblGRCm39 Ensembl
GRCm38884,030,286 - 84,042,600 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl884,030,294 - 84,042,589 (-)EnsemblGRCm38mm10GRCm38
MGSCv37886,554,185 - 86,566,474 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36886,920,423 - 86,932,680 (-)NCBIMGSCv36mm8
Celera888,323,361 - 88,337,096 (-)NCBICelera
Cytogenetic Map8C2NCBI
cM Map840.26NCBI
Il27ra
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81941,014,730 - 41,026,740 (+)NCBIGRCr8
mRatBN7.21924,109,963 - 24,121,977 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1924,109,972 - 24,121,938 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1930,931,218 - 30,943,116 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01931,585,624 - 31,597,522 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01933,808,352 - 33,820,238 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01925,151,835 - 25,163,995 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1925,149,897 - 25,164,086 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01936,128,834 - 36,140,875 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41925,795,355 - 25,807,317 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11925,802,500 - 25,806,104 (+)NCBI
Celera1923,657,895 - 23,669,746 (+)NCBICelera
Cytogenetic Map19q11NCBI
Il27ra
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541532,749,094 - 32,761,882 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495541532,749,682 - 32,762,532 (+)NCBIChiLan1.0ChiLan1.0
IL27RA
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12048,456,766 - 48,475,414 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2048,457,134 - 48,472,450 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2048,330,953 - 48,346,665 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02048,974,444 - 48,990,172 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2048,974,445 - 48,990,429 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12048,185,368 - 48,201,224 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02048,612,194 - 48,627,913 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02048,854,767 - 48,870,725 (-)NCBIUU_Cfam_GSD_1.0
Il27ra
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118207,634,220 - 207,649,537 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366592,705,985 - 2,722,748 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366592,706,037 - 2,720,486 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
IL27RA
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl265,127,287 - 65,149,740 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1265,127,278 - 65,149,665 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2265,401,420 - 65,423,808 (-)NCBISscrofa10.2Sscrofa10.2susScr3
IL27RA
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1612,679,270 - 12,699,254 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl612,686,838 - 12,701,867 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660746,950,555 - 6,971,183 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Il27ra
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046249011,274,840 - 1,287,861 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046249011,274,753 - 1,288,783 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSPPAT00000051224   ⟹   ENSPPAP00000028377
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1914,323,618 - 14,343,627 (+)Ensembl
RefSeq Acc Id: XM_055103907   ⟹   XP_054959882
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22018,960,949 - 18,982,615 (+)NCBI
NHGRI_mPanPan11917,961,963 - 17,983,593 (+)NCBI
RefSeq Acc Id: XM_055103908   ⟹   XP_054959883
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22018,961,717 - 18,982,615 (+)NCBI
NHGRI_mPanPan11917,962,728 - 17,983,593 (+)NCBI
RefSeq Acc Id: XM_055103909   ⟹   XP_054959884
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22018,961,718 - 18,982,615 (+)NCBI
NHGRI_mPanPan11917,962,729 - 17,983,593 (+)NCBI
Protein Sequences
Protein RefSeqs XP_054959882 (Get FASTA)   NCBI Sequence Viewer  
  XP_054959883 (Get FASTA)   NCBI Sequence Viewer  
  XP_054959884 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000028377.1
Reference Protein Sequences
RefSeq Acc Id: ENSPPAP00000028377   ⟸   ENSPPAT00000051224
RefSeq Acc Id: XP_054959882   ⟸   XM_055103907
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054959883   ⟸   XM_055103908
- Peptide Label: isoform X2
RefSeq Acc Id: XP_054959884   ⟸   XM_055103909
- Peptide Label: isoform X3
Protein Domains
Fibronectin type-III


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000037229 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000051224.1 UniProtKB/TrEMBL
Gene3D-CATH 2.60.40.10 UniProtKB/TrEMBL
InterPro FN3_dom UniProtKB/TrEMBL
  FN3_sf UniProtKB/TrEMBL
  Ig-like_fold UniProtKB/TrEMBL
NCBI Gene IL27RA ENTREZGENE
PANTHER INTERLEUKIN-27 RECEPTOR SUBUNIT ALPHA UniProtKB/TrEMBL
  INTERLEUKIN-27 RECEPTOR SUBUNIT ALPHA UniProtKB/TrEMBL
Pfam fn3 UniProtKB/TrEMBL
PROSITE FN3 UniProtKB/TrEMBL
Superfamily-SCOP SSF49265 UniProtKB/TrEMBL
UniProt A0A2R9BJA2_PANPA UniProtKB/TrEMBL