RPL14 (ribosomal protein L14) - Rat Genome Database

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Gene: RPL14 (ribosomal protein L14) Pan paniscus
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Symbol: RPL14
Name: ribosomal protein L14
RGD ID: 11779204
Description: ENCODES a protein that exhibits RNA binding (inferred); structural constituent of ribosome (inferred); INVOLVED IN ribosomal large subunit biogenesis (inferred); rRNA processing (inferred); translation (inferred); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Parkinson's disease (ortholog); renal cell carcinoma (ortholog); systemic lupus erythematosus (ortholog); FOUND IN cytoplasm (ortholog); cytosolic large ribosomal subunit (ortholog); cytosolic ribosome (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: 60S ribosomal protein L14; large ribosomal subunit protein eL14
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2240,417,822 - 40,422,866 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1340,422,584 - 40,427,631 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0340,362,235 - 40,367,349 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1340,632,699 - 40,637,697 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl340,632,762 - 40,637,697 (+)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
RPL14
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2240,417,822 - 40,422,866 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1340,422,584 - 40,427,631 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0340,362,235 - 40,367,349 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1340,632,699 - 40,637,697 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl340,632,762 - 40,637,697 (+)Ensemblpanpan1.1panPan2
RPL14
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38340,457,339 - 40,468,587 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl340,457,292 - 40,468,587 (+)EnsemblGRCh38hg38GRCh38
GRCh37340,498,830 - 40,510,078 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36340,473,805 - 40,478,863 (+)NCBINCBI36Build 36hg18NCBI36
Build 34340,473,818 - 40,478,862NCBI
Celera340,441,631 - 40,446,697 (+)NCBICelera
Cytogenetic Map3p22.1NCBI
HuRef340,542,849 - 40,547,946 (+)NCBIHuRef
CHM1_1340,449,375 - 40,454,457 (+)NCBICHM1_1
T2T-CHM13v2.0340,472,412 - 40,483,675 (+)NCBIT2T-CHM13v2.0
Rpl14
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm399120,400,579 - 120,403,724 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl9120,400,510 - 120,403,720 (+)EnsemblGRCm39 Ensembl
GRCm389120,571,517 - 120,574,653 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9120,571,444 - 120,574,654 (+)EnsemblGRCm38mm10GRCm38
MGSCv379120,480,634 - 120,483,770 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv369120,420,214 - 120,423,350 (+)NCBIMGSCv36mm8
Celera9121,041,119 - 121,044,256 (+)NCBICelera
Cytogenetic Map9F4NCBI
cM Map971.74NCBI
Rpl14
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr88129,163,620 - 129,166,745 (+)NCBIGRCr8
mRatBN7.28120,286,035 - 120,289,160 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl8120,284,645 - 120,289,064 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx8125,863,219 - 125,866,076 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.08124,062,237 - 124,065,094 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.08121,904,654 - 121,907,538 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.08129,240,528 - 129,243,400 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl8129,240,528 - 129,243,402 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.08128,438,421 - 128,441,293 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.48125,582,095 - 125,584,968 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.18125,601,831 - 125,604,704 (+)NCBI
Celera8119,428,067 - 119,430,939 (+)NCBICelera
Cytogenetic Map8q32NCBI
Rpl14
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542029,426,694 - 29,435,126 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495542029,430,757 - 29,434,669 (-)NCBIChiLan1.0ChiLan1.0
RPL14
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1239,907,479 - 9,911,114 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl239,907,479 - 9,911,114 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha239,942,051 - 9,945,706 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02310,194,701 - 10,198,342 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2310,194,701 - 10,198,342 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12310,005,062 - 10,008,711 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02310,142,962 - 10,146,601 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02310,130,617 - 10,134,279 (+)NCBIUU_Cfam_GSD_1.0
Rpl14
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118196,264,248 - 196,268,799 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647329,402,813 - 29,410,978 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647329,402,874 - 29,406,065 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
LOC100739087
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1156,689,050 - 56,689,768 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2163,408,784 - 63,409,444 (+)NCBISscrofa10.2Sscrofa10.2susScr3
RPL14
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1221,949,789 - 1,954,518 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl221,949,817 - 1,954,466 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666041165,248,722 - 165,263,817 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Rpl14
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473078,282,230 - 78,288,647 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473078,284,389 - 78,288,242 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSPPAT00000035059   ⟹   ENSPPAP00000012394
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl340,632,762 - 40,637,697 (+)Ensembl
Ensembl Acc Id: ENSPPAT00000035061   ⟹   ENSPPAP00000012396
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl340,633,272 - 40,637,649 (+)Ensembl
RefSeq Acc Id: XM_003826065   ⟹   XP_003826113
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2240,417,822 - 40,422,866 (+)NCBI
NHGRI_mPanPan1340,422,584 - 40,427,631 (+)NCBI
Mhudiblu_PPA_v0340,362,235 - 40,367,349 (+)NCBI
PanPan1.1340,632,699 - 40,637,697 (+)NCBI
Sequence:
RefSeq Acc Id: XM_003826066   ⟹   XP_003826114
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2240,417,893 - 40,422,866 (+)NCBI
NHGRI_mPanPan1340,422,666 - 40,427,631 (+)NCBI
Mhudiblu_PPA_v0340,362,303 - 40,367,349 (+)NCBI
PanPan1.1340,632,762 - 40,637,697 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_003826113 (Get FASTA)   NCBI Sequence Viewer  
  XP_003826114 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000012394
  ENSPPAP00000012394.1
  ENSPPAP00000012396
  ENSPPAP00000012396.1
RefSeq Acc Id: XP_003826113   ⟸   XM_003826065
- Peptide Label: isoform X1
- UniProtKB: A0A2R9A518 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_003826114   ⟸   XM_003826066
- Peptide Label: isoform X2
- UniProtKB: A0A2R9A518 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSPPAP00000012396   ⟸   ENSPPAT00000035061
Ensembl Acc Id: ENSPPAP00000012394   ⟸   ENSPPAT00000035059

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000029385 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000035059.1 UniProtKB/TrEMBL
  ENSPPAT00000035061.1 UniProtKB/TrEMBL
Gene3D-CATH 2.30.30.30 UniProtKB/TrEMBL
  6.10.250.2270 UniProtKB/TrEMBL
InterPro Rib_L2_dom2 UniProtKB/TrEMBL
  Ribosomal_L14e_dom UniProtKB/TrEMBL
  Ribosomal_protein_L14 UniProtKB/TrEMBL
  RPL14_KOW UniProtKB/TrEMBL
  Translation_prot_SH3-like_sf UniProtKB/TrEMBL
KEGG Report pps:100983933 UniProtKB/TrEMBL
NCBI Gene RPL14 ENTREZGENE
PANTHER 60S RIBOSOMAL PROTEIN L14 UniProtKB/TrEMBL
  PTHR11127 UniProtKB/TrEMBL
Pfam Ribosomal_L14e UniProtKB/TrEMBL
Superfamily-SCOP SSF50104 UniProtKB/TrEMBL
UniProt A0A2R9A518 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9A9S8_PANPA UniProtKB/TrEMBL