ASAH1 (N-acylsphingosine amidohydrolase 1) - Rat Genome Database

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Gene: ASAH1 (N-acylsphingosine amidohydrolase 1) Pan paniscus
Analyze
Symbol: ASAH1
Name: N-acylsphingosine amidohydrolase 1
RGD ID: 11777734
Description: ENCODES a protein that exhibits hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides (ortholog); nuclear receptor binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN cellular response to tumor necrosis factor (ortholog); ceramide biosynthetic process (ortholog); ceramide catabolic process (ortholog); PARTICIPATES IN ceramide signaling pathway; ASSOCIATED WITH atrial fibrillation (ortholog); benign epilepsy with centrotemporal spikes (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN early endosome (ortholog); endoplasmic reticulum (ortholog); extracellular space (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: acid ceramidase
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2736,528,846 - 36,557,133 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1812,254,484 - 12,282,710 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0817,272,632 - 17,300,902 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1814,226,156 - 14,254,155 (-)NCBIpanpan1.1PanPan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
ASAH1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2736,528,846 - 36,557,133 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1812,254,484 - 12,282,710 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0817,272,632 - 17,300,902 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1814,226,156 - 14,254,155 (-)NCBIpanpan1.1PanPan1.1panPan2
ASAH1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38818,055,992 - 18,084,961 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl818,055,992 - 18,084,998 (-)EnsemblGRCh38hg38GRCh38
GRCh37817,913,501 - 17,942,470 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36817,958,214 - 17,986,787 (-)NCBINCBI36Build 36hg18NCBI36
Build 34817,958,220 - 17,985,900NCBI
Celera816,879,836 - 16,908,397 (-)NCBICelera
Cytogenetic Map8p22NCBI
HuRef816,458,203 - 16,486,822 (-)NCBIHuRef
CHM1_1818,115,374 - 18,143,960 (-)NCBICHM1_1
T2T-CHM13v2.0818,323,470 - 18,352,414 (-)NCBIT2T-CHM13v2.0
Asah1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39841,793,683 - 41,850,681 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl841,793,234 - 41,827,810 (-)EnsemblGRCm39 Ensembl
GRCm38841,340,646 - 41,397,644 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl841,340,197 - 41,374,773 (-)EnsemblGRCm38mm10GRCm38
MGSCv37842,425,997 - 42,460,051 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36842,839,482 - 42,873,444 (-)NCBIMGSCv36mm8
Celera843,964,022 - 43,997,069 (-)NCBICelera
Cytogenetic Map8A4NCBI
cM Map823.89NCBI
Asah1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81657,669,927 - 57,701,349 (+)NCBIGRCr8
mRatBN7.21650,966,404 - 50,997,827 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1650,966,229 - 51,008,233 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1656,286,045 - 56,317,559 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01659,685,411 - 59,716,841 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01654,919,980 - 54,951,496 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01653,998,604 - 54,030,006 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1653,998,560 - 54,040,836 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01653,712,315 - 53,743,717 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41654,279,253 - 54,311,084 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11654,279,327 - 54,311,158 (+)NCBI
Celera1648,861,616 - 48,893,051 (+)NCBICelera
Cytogenetic Map16q12.1NCBI
Asah1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555521,623,738 - 1,659,086 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555521,623,263 - 1,660,285 (+)NCBIChiLan1.0ChiLan1.0
ASAH1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11641,297,215 - 41,335,521 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1641,297,809 - 41,323,078 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1641,806,175 - 41,854,360 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01643,355,806 - 43,404,107 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.11641,448,325 - 41,495,377 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01641,993,731 - 42,041,788 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01642,187,013 - 42,233,873 (-)NCBIUU_Cfam_GSD_1.0
Asah1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494337,949,337 - 38,005,322 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936554104,229 - 141,512 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936554104,666 - 141,761 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ASAH1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl175,712,058 - 5,758,821 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1175,712,048 - 5,749,811 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2176,296,192 - 6,333,787 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ASAH1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1816,151,974 - 16,181,726 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl816,151,247 - 16,181,155 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605226,094,678 - 26,124,159 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Asah1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476921,112,851 - 21,138,831 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476921,112,705 - 21,140,004 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


RefSeq Acc Id: XM_003823638   ⟹   XP_003823686
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2736,528,846 - 36,556,430 (-)NCBI
NHGRI_mPanPan1812,254,484 - 12,282,022 (-)NCBI
Mhudiblu_PPA_v0817,272,632 - 17,300,329 (-)NCBI
PanPan1.1814,226,156 - 14,253,704 (-)NCBI
Sequence:
RefSeq Acc Id: XM_003823639   ⟹   XP_003823687
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2736,528,846 - 36,557,133 (-)NCBI
NHGRI_mPanPan1812,254,484 - 12,282,710 (-)NCBI
Mhudiblu_PPA_v0817,272,632 - 17,300,902 (-)NCBI
PanPan1.1814,226,156 - 14,254,155 (-)NCBI
Sequence:
RefSeq Acc Id: XM_055116329   ⟹   XP_054972304
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2736,528,846 - 36,548,761 (-)NCBI
NHGRI_mPanPan1812,254,484 - 12,274,340 (-)NCBI
Protein Sequences
Protein RefSeqs XP_003823686 (Get FASTA)   NCBI Sequence Viewer  
  XP_003823687 (Get FASTA)   NCBI Sequence Viewer  
  XP_054972304 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000011203.1
  ENSPPAP00000011207.1
  ENSPPAP00000011208.1
RefSeq Acc Id: XP_003823687   ⟸   XM_003823639
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_003823686   ⟸   XM_003823638
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_054972304   ⟸   XM_055116329
- Peptide Label: isoform X2
- UniProtKB: A0A2R9A1T9 (UniProtKB/TrEMBL)

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000028793 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000033858.1 UniProtKB/TrEMBL
  ENSPPAT00000033862.1 UniProtKB/TrEMBL
  ENSPPAT00000033863.1 UniProtKB/TrEMBL
InterPro Acid_ceramidase-like UniProtKB/TrEMBL
  Acid_ceramidase_N UniProtKB/TrEMBL
  CBAH/NAAA_C UniProtKB/TrEMBL
  Ntn_hydrolases_N UniProtKB/TrEMBL
NCBI Gene ASAH1 ENTREZGENE
PANTHER ACID AMIDASE UniProtKB/TrEMBL
  ACID CERAMIDASE UniProtKB/TrEMBL
Pfam CBAH UniProtKB/TrEMBL
  NAAA-beta UniProtKB/TrEMBL
PIRSF Acid_ceramidase-like UniProtKB/TrEMBL
Superfamily-SCOP SSF56235 UniProtKB/TrEMBL
UniProt A0A2R9A1R6_PANPA UniProtKB/TrEMBL
  A0A2R9A1T9 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9A1U6_PANPA UniProtKB/TrEMBL