NMT1 (N-myristoyltransferase 1) - Rat Genome Database

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Gene: NMT1 (N-myristoyltransferase 1) Pan paniscus
Analyze
Symbol: NMT1
Name: N-myristoyltransferase 1
RGD ID: 11772941
Description: ENCODES a protein that exhibits myristoyltransferase activity (ortholog); INVOLVED IN in utero embryonic development (ortholog); ASSOCIATED WITH genetic disease (ortholog); FOUND IN cytoplasm (inferred); cytosol (inferred); membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: glycylpeptide N-tetradecanoyltransferase 1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21919,731,486 - 19,776,221 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11721,697,192 - 21,744,801 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01712,218,261 - 12,266,033 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11712,394,306 - 12,440,015 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1712,394,313 - 12,440,015 (-)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IEA)
cytosol  (IEA)
membrane  (IEA)
plasma membrane  (IEA)

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
NMT1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21919,731,486 - 19,776,221 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11721,697,192 - 21,744,801 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01712,218,261 - 12,266,033 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11712,394,306 - 12,440,015 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1712,394,313 - 12,440,015 (-)Ensemblpanpan1.1panPan2
NMT1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381745,061,317 - 45,109,016 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1744,957,992 - 45,109,016 (+)EnsemblGRCh38hg38GRCh38
GRCh371743,138,685 - 43,186,384 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361740,494,206 - 40,541,910 (+)NCBINCBI36Build 36hg18NCBI36
Build 341740,494,205 - 40,541,906NCBI
Celera1739,847,803 - 39,895,537 (+)NCBICelera
Cytogenetic Map17q21.31NCBI
HuRef1738,902,052 - 38,949,560 (+)NCBIHuRef
CHM1_11743,374,191 - 43,421,905 (+)NCBICHM1_1
T2T-CHM13v2.01745,915,189 - 45,962,892 (+)NCBIT2T-CHM13v2.0
Nmt1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3911102,919,163 - 102,959,734 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl11102,919,016 - 102,959,738 (+)EnsemblGRCm39 Ensembl
GRCm3811103,028,344 - 103,068,912 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl11103,028,190 - 103,068,912 (+)EnsemblGRCm38mm10GRCm38
MGSCv3711102,889,876 - 102,927,419 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3611102,844,652 - 102,882,195 (+)NCBIMGSCv36mm8
Celera11114,747,728 - 114,784,728 (+)NCBICelera
Cytogenetic Map11E1NCBI
cM Map1166.71NCBI
Nmt1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81088,488,918 - 88,525,496 (+)NCBIGRCr8
mRatBN7.21087,988,826 - 88,025,405 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1087,988,826 - 88,022,648 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1093,025,080 - 93,058,878 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01092,491,765 - 92,525,554 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01087,885,108 - 87,918,896 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01091,126,689 - 91,160,721 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1091,126,689 - 91,160,720 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01090,898,210 - 90,933,052 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41092,196,640 - 92,230,571 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11092,211,009 - 92,244,940 (+)NCBI
Celera1086,690,853 - 86,724,615 (+)NCBICelera
Cytogenetic Map10q32.1NCBI
Nmt1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495545117,791,462 - 17,819,268 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495545117,791,462 - 17,819,268 (+)NCBIChiLan1.0ChiLan1.0
NMT1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1918,422,103 - 18,462,612 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl918,425,268 - 18,459,196 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha917,806,787 - 17,847,293 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0919,095,049 - 19,135,559 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl919,095,062 - 19,129,196 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1917,973,061 - 18,013,656 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0918,151,929 - 18,192,447 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0918,307,823 - 18,348,551 (-)NCBIUU_Cfam_GSD_1.0
Nmt1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560217,770,450 - 17,803,515 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365411,391,087 - 1,421,248 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365411,391,133 - 1,424,148 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NMT1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1218,303,375 - 18,337,446 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11218,303,371 - 18,337,440 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21218,552,088 - 18,584,878 (-)NCBISscrofa10.2Sscrofa10.2susScr3
NMT1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11661,304,141 - 61,352,019 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1661,303,356 - 61,350,287 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607732,049,572 - 32,096,672 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Nmt1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624795283,819 - 311,587 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624795283,819 - 311,577 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_014341982 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JARIFH020000019 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSPPAT00000053588   ⟹   ENSPPAP00000030723
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1712,394,313 - 12,440,015 (-)Ensembl
RefSeq Acc Id: XM_014341982   ⟹   XP_014197468
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21919,731,486 - 19,776,221 (-)NCBI
NHGRI_mPanPan11721,697,192 - 21,744,801 (-)NCBI
Mhudiblu_PPA_v01712,218,261 - 12,266,033 (-)NCBI
PanPan1.11712,394,306 - 12,440,015 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_014197468 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000030723
  ENSPPAP00000030723.1
Reference Protein Sequences
RefSeq Acc Id: XP_014197468   ⟸   XM_014341982
- UniProtKB: A0A2R9BQM1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSPPAP00000030723   ⟸   ENSPPAT00000053588
Protein Domains
Glycylpeptide N-tetradecanoyltransferase C-terminal   Glycylpeptide N-tetradecanoyltransferase N-terminal


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000038322 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000053588.1 UniProtKB/TrEMBL
Gene3D-CATH 3.40.630.170 UniProtKB/TrEMBL
InterPro Acyl_CoA_acyltransferase UniProtKB/TrEMBL
  MyristoylCoA_TrFase UniProtKB/TrEMBL
  MyristoylCoA_TrFase_C UniProtKB/TrEMBL
  MyristoylCoA_TrFase_CS UniProtKB/TrEMBL
  MyristoylCoA_TrFase_N UniProtKB/TrEMBL
KEGG Report pps:100981120 UniProtKB/TrEMBL
NCBI Gene NMT1 ENTREZGENE
PANTHER GLYCYLPEPTIDE N-TETRADECANOYLTRANSFERASE 1 UniProtKB/TrEMBL
  PTHR11377 UniProtKB/TrEMBL
Pfam NMT UniProtKB/TrEMBL
  NMT_C UniProtKB/TrEMBL
PIRSF N-myristl_transf UniProtKB/TrEMBL
PROSITE NMT_1 UniProtKB/TrEMBL
  NMT_2 UniProtKB/TrEMBL
Superfamily-SCOP SSF55729 UniProtKB/TrEMBL
UniProt A0A2R9BQM1 ENTREZGENE, UniProtKB/TrEMBL