BMP15 (bone morphogenetic protein 15)

Gene: BMP15 (bone morphogenetic protein 15) Pan paniscus

Analyze

Symbol:

BMP15

Name:

bone morphogenetic protein 15

RGD ID:

11771234

Description:

ENCODES a protein that exhibits cytokine activity (inferred); growth factor activity (inferred); INVOLVED IN ovarian cumulus expansion (ortholog); positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH amenorrhea (ortholog); autistic disorder (ortholog); congenital disorder of glycosylation type IIm (ortholog); FOUND IN cytoplasm (ortholog)

Type:

protein-coding

RefSeq Status:

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly

Position:

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	X	52,284,905 - 52,291,966 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	X	52,288,509 - 52,295,570 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	X	43,071,039 - 43,076,941 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	X	50,783,925 - 50,789,830 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	X	50,783,925 - 50,791,369 (+)	Ensembl	panpan1.1		panPan2

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

amenorrhea (ISO)

autistic disorder (ISO)

congenital disorder of glycosylation type IIm (ISO)

genetic disease (ISO)

hereditary breast ovarian cancer syndrome (ISO)

immune dysregulation-polyendocrinopathy-enteropathy-X-linked syndrome (ISO)

neurodegeneration with brain iron accumulation 5 (ISO)

ovarian dysgenesis 2 (ISO)

polycystic ovary syndrome (ISO)

Postmenopausal Osteoporosis (ISO)

primary ovarian insufficiency (ISO)

primary ovarian insufficiency 16 (ISO)

Stocco Dos Santos type X-linked intellectual disability (ISO)

syndromic X-linked intellectual disability Lubs type (ISO)

X-linked epilepsy with variable learning disabilities and behavior disorders (ISO)

X-linked severe congenital neutropenia (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

ovarian cumulus expansion (ISO)

positive regulation of DNA-templated transcription (ISO)

signal transduction (IEA)

Cellular Component

cytoplasm (ISO)

extracellular region (IEA)

extracellular space (IEA)

Molecular Function

cytokine activity (IEA)

growth factor activity (IEA)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

BMP15
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	X	52,284,905 - 52,291,966 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	X	52,288,509 - 52,295,570 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	X	43,071,039 - 43,076,941 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	X	50,783,925 - 50,789,830 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	X	50,783,925 - 50,791,369 (+)	Ensembl	panpan1.1		panPan2

BMP15
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	X	50,910,735 - 50,916,641 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	X	50,910,735 - 50,916,641 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	X	50,653,735 - 50,659,641 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	X	50,670,524 - 50,676,347 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	X	50,486,819 - 50,492,643	NCBI
Celera	X	54,697,190 - 54,703,096 (+)	NCBI		Celera
Cytogenetic Map	X	p11.22	NCBI
HuRef	X	48,097,311 - 48,103,406 (+)	NCBI		HuRef
CHM1_1	X	50,733,338 - 50,739,244 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	X	50,181,955 - 50,187,861 (+)	NCBI		T2T-CHM13v2.0

Bmp15
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	X	6,226,108 - 6,232,778 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	X	6,226,161 - 6,232,775 (-)	Ensembl		GRCm39 Ensembl
GRCm38	X	6,314,054 - 6,320,724 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	X	6,314,107 - 6,320,721 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	X	5,891,224 - 5,897,841 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	X	5,489,598 - 5,496,190 (-)	NCBI		MGSCv36	mm8
Celera	X	5,090,389 - 5,097,007 (+)	NCBI		Celera
Cytogenetic Map	X	A1.1	NCBI
cM Map	X	2.81	NCBI

Bmp15
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	X	18,840,943 - 18,846,006 (+)	NCBI		GRCr8
mRatBN7.2	X	16,169,123 - 16,174,187 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	X	16,169,123 - 16,174,187 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	X	20,981,822 - 20,986,886 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	X	19,096,380 - 19,101,444 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	X	15,361,328 - 15,366,392 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	X	17,016,831 - 17,021,894 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	X	17,016,778 - 17,023,418 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	X	17,797,360 - 17,802,423 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	X	29,003,933 - 29,008,996 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	X	29,057,401 - 29,062,465 (-)	NCBI
Celera	X	16,238,220 - 16,243,279 (+)	NCBI		Celera
Cytogenetic Map	X	q12	NCBI

Bmp15
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955543	2,339,659 - 2,345,406 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955543	2,304,112 - 2,345,376 (+)	NCBI	ChiLan1.0	ChiLan1.0

BMP15
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	X	43,765,126 - 43,771,277 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	X	43,764,777 - 43,771,287 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	X	18,142,461 - 18,147,409 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	X	43,885,645 - 43,890,593 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	X	43,885,666 - 43,890,593 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UNSW_CanFamBas_1.0	X	43,877,414 - 43,882,362 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	X	43,972,394 - 43,977,342 (+)	NCBI		UU_Cfam_GSD_1.0

Bmp15
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	X	36,301,604 - 36,318,300 (+)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936873	109,156 - 115,498 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

BMP15
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	X	44,613,122 - 44,620,575 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	X	44,613,122 - 44,620,575 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	X	49,544,707 - 49,550,877 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

BMP15
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	X	47,713,434 - 47,722,818 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	X	47,713,957 - 47,719,777 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666086	1,314,361 - 1,320,255 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Bmp15
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624893	3,014,989 - 3,021,746 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624893	3,014,535 - 3,020,862 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_003805950	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JARIFH020000024	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSPPAT00000005450 ⟹ ENSPPAP00000001156

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	X	50,783,925 - 50,791,369 (+)	Ensembl

RefSeq Acc Id:

XM_003805950 ⟹ XP_003805998

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	X	52,284,905 - 52,291,966 (+)	NCBI
NHGRI_mPanPan1	X	52,288,509 - 52,295,570 (+)	NCBI
Mhudiblu_PPA_v0	X	43,071,039 - 43,076,941 (+)	NCBI
PanPan1.1	X	50,783,925 - 50,789,830 (+)	NCBI

Sequence:

show sequence

GGGCTTGTGTTGGGGCCTGTTGTTGAACACTAAGCCTTTCAAGATGGGCCTCCTCAGTATTCTT
AGAATTCTTTTTCTTTGTGAACTCGTGCTTGTCATGGAACACAGGGCCCAAATGGCAGAAGGAG
GGCAGTCCTCTATTGCCCTTCTGGCTGAGGCCCCTACTTTGCCCCTGATTGAGGAGCTGCTAGA
AGAATCCCCTGGCGAACAGCCAAGGAAGCCCCGGCTCCTAGGGCATTCACTGCGGTACATGCTG
GAGTTGTACCGGCGTTCAGCTGACTCGCATGGGCACCCTAGAGAGAACCGCACCATTGGGGCCA
CCATGGTGAGGCTGGTGAAGCCCTTGACCAATGTGGCAAGGCCTCACAGAGGTACCTGGCATAT
ACAGATCCTGGGCTTTCCTCTCAGACCAAACCGAGGACTATACCAACTAGTTAGAGCCACTGTG
GTTTACCGCCATCATCTCCAACTAACTCGCTTCAATCTCTCCTGCCATGTGGAGCCCTGGGTGC
AGAAAAACCCAACCAACCACTTCCCTTCCTCAGAAGGAGATTCCTCAAAACCTTCCCTGATGTC
TAACGCTTGGAAAGAGATGGATATCACACAACTTGTTCAGCAAAGGTTCTGGAATAACAAGGGA
CACAGGATCCTACGACTCCGTTTTATGTGTCAGCAGCAAAAAGATAGTGGTGGTCTTGAGCTCT
GGCATGGCACTTCATCCTTGGACACTGCCTTCTTGTTACTCTGTTTCAATGATACTCATAAAAG
CATTCGGAAGGCTAAATTTCTTCCCAGGGGCATGGAGGAGTTCATGGAAAGGGAATCTCTTCTT
CTCCGGAGAACCCGACAAGCAGATGGTATCTCAGCTGAGGTTACTGCCTCTTCCTCAAAACATA
GTGGGCCTGAAAATAACCAGTGTTCCCTCCACCCTTTCCAAATCAGCTTCCGCCAGCTGGGTTG
GGATCACTGGATCATTGCTCCCCATTTCTACACCCCAAACTACTGTAAAGGAACTTGTCTCCGA
GTACTACGCGATGGTCTCAATTCCCCCAATCACGCCATTATTCAGAACCTTATCAATCAGTTGG
TGGACCAGAGTGTTCCCCGGCCCTCCTGTGTCCCGTATAAGTATGTTCCAATTAGCGTCCTTAT
GATTGAGGCAAGTGGGAGTATTTTGTACAAGGAGTATGAGGGTATGATTGCTGAGTCTTGTACA
TGCAGATGACAGCAACAGTACAGCTAGATCAGGTTTCCCAGGA

hide sequence

Protein Sequences


Protein RefSeqs	XP_003805998	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSPPAP00000001156
	ENSPPAP00000001156.1

RefSeq Acc Id:

XP_003805998 ⟸ XM_003805950

- UniProtKB:

A0A2R8ZEV6 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MGLLSILRILFLCELVLVMEHRAQMAEGGQSSIALLAEAPTLPLIEELLEESPGEQPRKPRLLG
HSLRYMLELYRRSADSHGHPRENRTIGATMVRLVKPLTNVARPHRGTWHIQILGFPLRPNRGLY
QLVRATVVYRHHLQLTRFNLSCHVEPWVQKNPTNHFPSSEGDSSKPSLMSNAWKEMDITQLVQQ
RFWNNKGHRILRLRFMCQQQKDSGGLELWHGTSSLDTAFLLLCFNDTHKSIRKAKFLPRGMEEF
MERESLLLRRTRQADGISAEVTASSSKHSGPENNQCSLHPFQISFRQLGWDHWIIAPHFYTPNY
CKGTCLRVLRDGLNSPNHAIIQNLINQLVDQSVPRPSCVPYKYVPISVLMIEASGSILYKEYEG
MIAESCTCR

hide sequence

RefSeq Acc Id:

ENSPPAP00000001156 ⟸ ENSPPAT00000005450

Protein Domains

TGF-beta family profile

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSPPAG00000005038	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSPPAT00000005450.1	UniProtKB/TrEMBL
Gene3D-CATH	2.10.90.10	UniProtKB/TrEMBL
InterPro	Cystine-knot_cytokine	UniProtKB/TrEMBL
	TGF-b_C	UniProtKB/TrEMBL
	TGF-beta-rel	UniProtKB/TrEMBL
	TGFb_CS	UniProtKB/TrEMBL
NCBI Gene	BMP15	ENTREZGENE
PANTHER	PTHR11848	UniProtKB/TrEMBL
	PTHR11848:SF22	UniProtKB/TrEMBL
Pfam	TGF_beta	UniProtKB/TrEMBL
PRINTS	INHIBINA	UniProtKB/TrEMBL
PROSITE	TGF_BETA_1	UniProtKB/TrEMBL
	TGF_BETA_2	UniProtKB/TrEMBL
SMART	TGFB	UniProtKB/TrEMBL
Superfamily-SCOP	SSF57501	UniProtKB/TrEMBL
UniProt	A0A2R8ZEV6	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD

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