ZNF831 (zinc finger protein 831) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Gene: ZNF831 (zinc finger protein 831) Pan paniscus
Analyze
Symbol: ZNF831
Name: zinc finger protein 831
RGD ID: 11770606
Description: ASSOCIATED WITH COVID-19 (ortholog); genetic disease (ortholog); melanoma (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22164,910,902 - 65,024,286 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12064,904,024 - 65,017,408 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02055,498,545 - 55,611,830 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12056,859,452 - 56,971,937 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2056,859,452 - 56,971,937 (+)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View
COVID-19  (ISO)
genetic disease  (ISO)
melanoma  (ISO)

References

Genomics

Comparative Map Data
ZNF831
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22164,910,902 - 65,024,286 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12064,904,024 - 65,017,408 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02055,498,545 - 55,611,830 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12056,859,452 - 56,971,937 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2056,859,452 - 56,971,937 (+)Ensemblpanpan1.1panPan2
ZNF831
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382059,123,388 - 59,259,113 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2059,123,381 - 59,259,113 (+)EnsemblGRCh38hg38GRCh38
GRCh372057,698,443 - 57,834,168 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362057,199,470 - 57,267,563 (+)NCBINCBI36Build 36hg18NCBI36
Celera2054,506,716 - 54,574,808 (+)NCBICelera
Cytogenetic Map20q13.32NCBI
HuRef2054,553,212 - 54,621,290 (+)NCBIHuRef
CHM1_12057,667,398 - 57,735,492 (+)NCBICHM1_1
T2T-CHM13v2.02060,906,490 - 61,042,393 (+)NCBIT2T-CHM13v2.0
Zfp831
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392174,440,453 - 174,552,625 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2174,485,327 - 174,552,625 (+)EnsemblGRCm39 Ensembl
GRCm382174,598,682 - 174,710,832 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2174,643,534 - 174,710,832 (+)EnsemblGRCm38mm10GRCm38
MGSCv372174,469,035 - 174,536,333 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv362174,469,035 - 174,531,413 (+)NCBIMGSCv36mm8
Celera2180,603,582 - 180,669,833 (+)NCBICelera
Cytogenetic Map2H4NCBI
cM Map298.04NCBI
Zfp831
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83183,811,489 - 183,931,900 (+)NCBIGRCr8
mRatBN7.23163,393,787 - 163,510,654 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3163,438,006 - 163,509,095 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx3167,236,743 - 167,307,833 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03175,733,329 - 175,804,162 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03173,477,606 - 173,548,699 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.03172,691,455 - 172,804,804 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3172,692,452 - 172,804,916 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03178,724,108 - 178,850,014 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43166,366,178 - 166,437,754 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera3162,607,520 - 162,677,493 (+)NCBICelera
Cytogenetic Map3q43NCBI
Znf831
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955445289,231 - 418,246 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955445284,571 - 418,115 (-)NCBIChiLan1.0ChiLan1.0
ZNF831
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12443,884,478 - 44,012,382 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2443,924,030 - 43,989,609 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2443,130,356 - 43,259,264 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02444,752,219 - 44,881,119 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2444,780,877 - 44,858,573 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12443,853,835 - 43,982,721 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02443,972,589 - 44,101,449 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02444,632,586 - 44,761,697 (+)NCBIUU_Cfam_GSD_1.0
Znf831
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640181,597,499 - 181,702,795 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365301,642,670 - 1,704,464 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365301,642,670 - 1,646,785 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ZNF831
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1759,277,483 - 59,383,850 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11759,277,242 - 59,386,483 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21766,697,768 - 66,804,563 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ZNF831
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.124,885,619 - 4,996,646 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl24,886,914 - 4,952,012 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605052,930,843 - 53,047,495 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Znf831
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462474125,485,789 - 25,602,713 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_003810806 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JARIFH020000021 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSPPAT00000044624   ⟹   ENSPPAP00000021820
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl2056,859,452 - 56,971,937 (+)Ensembl
RefSeq Acc Id: XM_003810806   ⟹   XP_003810854
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22164,910,902 - 65,024,286 (+)NCBI
NHGRI_mPanPan12064,904,024 - 65,017,408 (+)NCBI
Mhudiblu_PPA_v02055,498,545 - 55,611,830 (+)NCBI
PanPan1.12056,859,452 - 56,971,937 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_003810854 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000021820.1
Reference Protein Sequences
RefSeq Acc Id: XP_003810854   ⟸   XM_003810806
- UniProtKB: A0A2R9B2X9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSPPAP00000021820   ⟸   ENSPPAT00000044624
Protein Domains
C2H2-type


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000034101 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000044624.1 UniProtKB/TrEMBL
Gene3D-CATH Classic Zinc Finger UniProtKB/TrEMBL
InterPro Znf_C2H2_sf UniProtKB/TrEMBL
  Znf_C2H2_type UniProtKB/TrEMBL
KEGG Report pps:100980249 UniProtKB/TrEMBL
NCBI Gene ZNF831 ENTREZGENE
PANTHER ZINC FINGER PROTEIN 831 UniProtKB/TrEMBL
  ZINC FINGER PROTEIN 831 UniProtKB/TrEMBL
Pfam zf-C2H2 UniProtKB/TrEMBL
PROSITE ZINC_FINGER_C2H2_1 UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_2 UniProtKB/TrEMBL
SMART ZnF_C2H2 UniProtKB/TrEMBL
Superfamily-SCOP SSF57667 UniProtKB/TrEMBL
UniProt A0A2R9B2X9 ENTREZGENE, UniProtKB/TrEMBL