FBXO15 (F-box protein 15) - Rat Genome Database

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Gene: FBXO15 (F-box protein 15) Pan paniscus
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Symbol: FBXO15
Name: F-box protein 15
RGD ID: 11764099
Description: ASSOCIATED WITH chromosome 18q deletion syndrome (ortholog); genetic disease (ortholog); intestinal volvulus (ortholog); FOUND IN membrane (inferred); SCF ubiquitin ligase complex (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: F-box only protein 15
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21791,603,572 - 91,677,599 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11877,296,195 - 77,370,222 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01867,455,924 - 67,529,959 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11870,740,443 - 70,814,440 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1870,740,443 - 70,814,441 (-)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
FBXO15
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21791,603,572 - 91,677,599 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11877,296,195 - 77,370,222 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01867,455,924 - 67,529,959 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11870,740,443 - 70,814,440 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1870,740,443 - 70,814,441 (-)Ensemblpanpan1.1panPan2
FBXO15
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381874,073,368 - 74,147,834 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1874,073,353 - 74,147,843 (-)EnsemblGRCh38hg38GRCh38
GRCh371871,740,603 - 71,815,069 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361869,891,585 - 69,965,929 (-)NCBINCBI36Build 36hg18NCBI36
Build 341869,891,585 - 69,965,929NCBI
Celera1868,605,113 - 68,679,631 (-)NCBICelera
Cytogenetic Map18q22.3NCBI
HuRef1868,473,086 - 68,547,604 (-)NCBIHuRef
CHM1_11871,735,783 - 71,810,300 (-)NCBICHM1_1
T2T-CHM13v2.01874,294,328 - 74,368,800 (-)NCBIT2T-CHM13v2.0
Fbxo15
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391884,952,677 - 84,999,601 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1884,952,907 - 84,999,598 (+)EnsemblGRCm39 Ensembl
GRCm381884,934,552 - 84,981,476 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1884,934,782 - 84,981,473 (+)EnsemblGRCm38mm10GRCm38
MGSCv371885,104,417 - 85,150,784 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361885,069,218 - 85,115,585 (+)NCBIMGSCv36mm8
Celera1885,999,925 - 86,046,500 (+)NCBICelera
Cytogenetic Map18E4NCBI
cM Map1857.53NCBI
Fbxo15
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81880,594,444 - 80,909,549 (+)NCBIGRCr8
mRatBN7.21878,319,577 - 78,634,695 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1878,319,534 - 78,390,765 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1880,430,603 - 80,501,496 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01881,102,667 - 81,173,562 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01878,938,351 - 79,009,237 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01881,785,408 - 81,882,796 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1881,821,127 - 81,882,796 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01880,824,116 - 80,920,461 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41881,542,665 - 81,599,809 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11881,602,639 - 81,673,161 (+)NCBI
Celera1876,911,761 - 77,001,110 (+)NCBICelera
Cytogenetic Map18q12.3NCBI
Fbxo15
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540257,523,696 - 57,586,251 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495540257,524,726 - 57,586,198 (-)NCBIChiLan1.0ChiLan1.0
FBXO15
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.115,182,224 - 5,231,520 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl15,182,244 - 5,231,424 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha16,189,500 - 6,236,997 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.014,992,651 - 5,040,145 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl14,992,642 - 5,040,142 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.115,031,428 - 5,078,923 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.014,985,124 - 5,032,612 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.015,156,339 - 5,203,832 (+)NCBIUU_Cfam_GSD_1.0
Fbxo15
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494418,950,876 - 19,029,039 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366164,272,395 - 4,332,238 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366164,272,502 - 4,332,172 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FBXO15
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1149,856,489 - 149,896,536 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11149,856,032 - 149,898,829 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21165,983,435 - 166,232,074 (+)NCBISscrofa10.2Sscrofa10.2susScr3
FBXO15
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1185,745,434 - 5,822,855 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl185,753,036 - 5,822,888 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366606020,053,872 - 20,137,642 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Fbxo15
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248066,521,208 - 6,586,709 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248066,521,185 - 6,584,678 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


RefSeq Acc Id: ENSPPAT00000009547   ⟹   ENSPPAP00000001945
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1870,740,443 - 70,814,440 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000009594   ⟹   ENSPPAP00000001958
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1870,791,242 - 70,814,441 (-)Ensembl
RefSeq Acc Id: XM_003827292   ⟹   XP_003827340
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21791,603,572 - 91,677,599 (-)NCBI
NHGRI_mPanPan11877,296,195 - 77,370,222 (-)NCBI
Mhudiblu_PPA_v01867,455,924 - 67,529,959 (-)NCBI
PanPan1.11870,740,443 - 70,814,440 (-)NCBI
Sequence:
RefSeq Acc Id: XM_034944044   ⟹   XP_034799935
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21791,603,572 - 91,677,400 (-)NCBI
NHGRI_mPanPan11877,296,195 - 77,370,023 (-)NCBI
Mhudiblu_PPA_v01867,455,924 - 67,529,930 (-)NCBI
RefSeq Acc Id: XM_055102361   ⟹   XP_054958336
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21791,603,572 - 91,677,535 (-)NCBI
NHGRI_mPanPan11877,296,195 - 77,370,158 (-)NCBI
RefSeq Acc Id: XM_055102362   ⟹   XP_054958337
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21791,603,572 - 91,677,511 (-)NCBI
NHGRI_mPanPan11877,296,195 - 77,370,134 (-)NCBI
RefSeq Acc Id: XM_055102363   ⟹   XP_054958338
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21791,603,572 - 91,676,906 (-)NCBI
NHGRI_mPanPan11877,296,195 - 77,369,529 (-)NCBI
RefSeq Acc Id: XM_055102364   ⟹   XP_054958339
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21791,603,572 - 91,677,535 (-)NCBI
NHGRI_mPanPan11877,296,195 - 77,370,158 (-)NCBI
RefSeq Acc Id: XP_003827340   ⟸   XM_003827292
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_034799935   ⟸   XM_034944044
- Peptide Label: isoform X5
- UniProtKB: A0A2R8ZA93 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSPPAP00000001945   ⟸   ENSPPAT00000009547
RefSeq Acc Id: ENSPPAP00000001958   ⟸   ENSPPAT00000009594
RefSeq Acc Id: XP_054958336   ⟸   XM_055102361
- Peptide Label: isoform X2
RefSeq Acc Id: XP_054958339   ⟸   XM_055102364
- Peptide Label: isoform X4
RefSeq Acc Id: XP_054958337   ⟸   XM_055102362
- Peptide Label: isoform X3
RefSeq Acc Id: XP_054958338   ⟸   XM_055102363
- Peptide Label: isoform X5
- UniProtKB: A0A2R8ZA93 (UniProtKB/TrEMBL)
Protein Domains
F-box


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000008805 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000009547.1 UniProtKB/TrEMBL
  ENSPPAT00000009594.1 UniProtKB/TrEMBL
Gene3D-CATH 1.20.1280.50 UniProtKB/TrEMBL
InterPro F-box-like_dom_sf UniProtKB/TrEMBL
  F-box_dom UniProtKB/TrEMBL
NCBI Gene FBXO15 ENTREZGENE
PANTHER F-BOX ONLY PROTEIN 15 UniProtKB/TrEMBL
  F-BOX ONLY PROTEIN 15 UniProtKB/TrEMBL
Pfam F-box-like UniProtKB/TrEMBL
PROSITE FBOX UniProtKB/TrEMBL
SMART FBOX UniProtKB/TrEMBL
Superfamily-SCOP SSF81383 UniProtKB/TrEMBL
UniProt A0A2R8ZA93 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R8ZED9_PANPA UniProtKB/TrEMBL