ODAD1 (outer dynein arm docking complex subunit 1) - Rat Genome Database

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Gene: ODAD1 (outer dynein arm docking complex subunit 1) Pan paniscus
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Symbol: ODAD1
Name: outer dynein arm docking complex subunit 1
RGD ID: 11763114
Description: INVOLVED IN cilium movement (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Fraser syndrome 3 (ortholog); genetic disease (ortholog); FOUND IN cilium (ortholog); outer dynein arm (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: CCDC114; coiled-coil domain containing 114; coiled-coil domain-containing protein 114; outer dynein arm-docking complex subunit 1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22054,401,006 - 54,426,949 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11956,327,292 - 56,353,239 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01945,297,346 - 45,322,895 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11953,891,345 - 53,916,597 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1953,891,345 - 53,915,541 (-)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
axoneme  (IEA)
cilium  (ISO)
outer dynein arm  (ISO)

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
ODAD1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22054,401,006 - 54,426,949 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11956,327,292 - 56,353,239 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01945,297,346 - 45,322,895 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11953,891,345 - 53,916,597 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1953,891,345 - 53,915,541 (-)Ensemblpanpan1.1panPan2
ODAD1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381948,296,452 - 48,321,971 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1948,296,457 - 48,321,971 (-)EnsemblGRCh38hg38GRCh38
GRCh371948,799,709 - 48,825,228 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361953,491,532 - 53,499,144 (-)NCBINCBI36Build 36hg18NCBI36
Celera1945,664,943 - 45,688,566 (-)NCBICelera
Cytogenetic Map19q13.33NCBI
HuRef1945,180,929 - 45,204,238 (-)NCBIHuRef
CHM1_11948,801,809 - 48,825,433 (-)NCBICHM1_1
T2T-CHM13v2.01951,290,607 - 51,316,116 (-)NCBIT2T-CHM13v2.0
Odad1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39745,572,591 - 45,598,387 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl745,573,496 - 45,598,387 (+)EnsemblGRCm39 Ensembl
GRCm38745,923,159 - 45,948,963 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl745,924,072 - 45,948,963 (+)EnsemblGRCm38mm10GRCm38
MGSCv37753,183,768 - 53,204,326 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36745,796,440 - 45,816,998 (+)NCBIMGSCv36mm8
Celera741,393,412 - 41,413,610 (+)NCBICelera
Cytogenetic Map7B3NCBI
cM Map729.6NCBI
Odad1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81105,530,196 - 105,557,358 (+)NCBIGRCr8
mRatBN7.2196,392,132 - 96,420,926 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl196,394,824 - 96,420,925 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1101,780,969 - 101,807,067 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01110,252,957 - 110,279,055 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01103,543,322 - 103,569,420 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01101,904,042 - 101,932,999 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1101,906,903 - 101,932,998 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01102,983,076 - 103,016,209 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4196,395,955 - 96,422,205 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1196,474,065 - 96,499,980 (+)NCBI
Celera190,647,474 - 90,673,535 (+)NCBICelera
Cytogenetic Map1q22NCBI
Odad1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555592,124,525 - 2,151,610 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555592,123,941 - 2,153,192 (+)NCBIChiLan1.0ChiLan1.0
ODAD1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11107,910,313 - 107,936,963 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1107,905,070 - 107,936,963 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1107,429,613 - 107,458,240 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01108,432,561 - 108,460,951 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1108,432,306 - 108,460,951 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11108,098,975 - 108,127,887 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01107,745,740 - 107,774,654 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01108,581,840 - 108,610,179 (+)NCBIUU_Cfam_GSD_1.0
Odad1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934920,821,244 - 20,848,254 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366642,439,426 - 2,465,094 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366642,439,434 - 2,464,878 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ODAD1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1653,729,915 - 53,754,508 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2649,366,399 - 49,391,000 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ODAD1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1641,561,452 - 41,588,632 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl641,560,522 - 41,586,456 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607321,341,774 - 21,365,534 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Odad1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248325,439,764 - 5,460,822 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_008966717 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034945321 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034945322 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034945323 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034945324 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034945325 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_055103505 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_055103506 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_055103507 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_055103508 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_055103509 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_055103510 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_055103511 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_055103512 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063599597 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JARIFH020000020 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSPPAT00000050120   ⟹   ENSPPAP00000027280
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1953,891,345 - 53,915,541 (-)Ensembl
RefSeq Acc Id: XM_008966717   ⟹   XP_008964965
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22054,401,006 - 54,426,949 (-)NCBI
NHGRI_mPanPan11956,327,292 - 56,353,239 (-)NCBI
Mhudiblu_PPA_v01945,297,346 - 45,321,847 (-)NCBI
PanPan1.11953,891,345 - 53,915,541 (-)NCBI
Sequence:
RefSeq Acc Id: XM_034945322   ⟹   XP_034801213
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22054,405,665 - 54,426,949 (-)NCBI
NHGRI_mPanPan11956,331,441 - 56,353,239 (-)NCBI
Mhudiblu_PPA_v01945,302,223 - 45,322,880 (-)NCBI
RefSeq Acc Id: XM_034945323   ⟹   XP_034801214
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22054,405,665 - 54,426,949 (-)NCBI
NHGRI_mPanPan11956,331,441 - 56,353,239 (-)NCBI
Mhudiblu_PPA_v01945,302,223 - 45,322,895 (-)NCBI
RefSeq Acc Id: XM_034945325   ⟹   XP_034801216
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22054,401,006 - 54,424,940 (-)NCBI
NHGRI_mPanPan11956,327,292 - 56,351,230 (-)NCBI
Mhudiblu_PPA_v01945,297,346 - 45,321,280 (-)NCBI
RefSeq Acc Id: XM_055103505   ⟹   XP_054959480
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22054,405,665 - 54,426,949 (-)NCBI
NHGRI_mPanPan11956,331,441 - 56,353,239 (-)NCBI
RefSeq Acc Id: XM_055103506   ⟹   XP_054959481
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22054,405,665 - 54,426,949 (-)NCBI
NHGRI_mPanPan11956,331,441 - 56,353,239 (-)NCBI
RefSeq Acc Id: XM_055103507   ⟹   XP_054959482
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22054,405,665 - 54,426,949 (-)NCBI
NHGRI_mPanPan11956,331,441 - 56,353,239 (-)NCBI
RefSeq Acc Id: XM_055103508   ⟹   XP_054959483
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22054,401,006 - 54,426,949 (-)NCBI
NHGRI_mPanPan11956,327,292 - 56,353,239 (-)NCBI
RefSeq Acc Id: XM_055103509   ⟹   XP_054959484
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22054,401,006 - 54,426,949 (-)NCBI
NHGRI_mPanPan11956,327,292 - 56,353,239 (-)NCBI
RefSeq Acc Id: XM_055103510   ⟹   XP_054959485
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22054,401,006 - 54,426,949 (-)NCBI
NHGRI_mPanPan11956,327,292 - 56,353,239 (-)NCBI
RefSeq Acc Id: XM_055103511   ⟹   XP_054959486
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22054,401,006 - 54,426,949 (-)NCBI
NHGRI_mPanPan11956,327,292 - 56,353,239 (-)NCBI
RefSeq Acc Id: XM_055103512   ⟹   XP_054959487
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22054,401,006 - 54,426,949 (-)NCBI
NHGRI_mPanPan11956,327,292 - 56,353,239 (-)NCBI
RefSeq Acc Id: XM_063599597   ⟹   XP_063455667
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22054,405,665 - 54,425,960 (-)NCBI
RefSeq Acc Id: XP_008964965   ⟸   XM_008966717
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_034801216   ⟸   XM_034945325
- Peptide Label: isoform X2
RefSeq Acc Id: XP_034801214   ⟸   XM_034945323
- Peptide Label: isoform X1
RefSeq Acc Id: XP_034801213   ⟸   XM_034945322
- Peptide Label: isoform X1
RefSeq Acc Id: ENSPPAP00000027280   ⟸   ENSPPAT00000050120
RefSeq Acc Id: XP_054959485   ⟸   XM_055103510
- Peptide Label: isoform X3
RefSeq Acc Id: XP_054959486   ⟸   XM_055103511
- Peptide Label: isoform X3
RefSeq Acc Id: XP_054959483   ⟸   XM_055103508
- Peptide Label: isoform X3
RefSeq Acc Id: XP_054959487   ⟸   XM_055103512
- Peptide Label: isoform X3
RefSeq Acc Id: XP_054959484   ⟸   XM_055103509
- Peptide Label: isoform X3
RefSeq Acc Id: XP_054959482   ⟸   XM_055103507
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054959481   ⟸   XM_055103506
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054959480   ⟸   XM_055103505
- Peptide Label: isoform X1
RefSeq Acc Id: XP_063455667   ⟸   XM_063599597
- Peptide Label: isoform X1

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000036707 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000050120.1 UniProtKB/TrEMBL
InterPro ODAD1_CC UniProtKB/TrEMBL
NCBI Gene CCDC114 ENTREZGENE
PANTHER OUTER DYNEIN ARM-DOCKING COMPLEX SUBUNIT 1 UniProtKB/TrEMBL
  UNCHARACTERIZED UniProtKB/TrEMBL
Pfam DUF6872 UniProtKB/TrEMBL
UniProt A0A2R9BKT0_PANPA UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-09-29 ODAD1  outer dynein arm docking complex subunit 1  CCDC114  coiled-coil domain containing 114  Symbol and/or name change 5135510 APPROVED