TMEM243 (transmembrane protein 243) - Rat Genome Database

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Gene: TMEM243 (transmembrane protein 243) Pan paniscus
Analyze
Symbol: TMEM243
Name: transmembrane protein 243
RGD ID: 11751804
Description: ASSOCIATED WITH genetic disease (ortholog); pleomorphic xanthoastrocytoma (ortholog); FOUND IN membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: transmembrane protein C7orf23-like
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v26105,070,719 - 105,094,923 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan17153,335,357 - 153,359,558 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0779,178,806 - 79,210,021 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1792,836,440 - 92,860,583 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl792,836,440 - 92,860,583 (-)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
membrane  (IEA)

Molecular Function

References

Genomics

Comparative Map Data
TMEM243
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v26105,070,719 - 105,094,923 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan17153,335,357 - 153,359,558 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0779,178,806 - 79,210,021 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1792,836,440 - 92,860,583 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl792,836,440 - 92,860,583 (-)Ensemblpanpan1.1panPan2
TMEM243
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38787,196,160 - 87,220,587 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl787,196,160 - 87,220,587 (-)EnsemblGRCh38hg38GRCh38
GRCh37786,825,476 - 86,849,903 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36786,663,414 - 86,686,967 (-)NCBINCBI36Build 36hg18NCBI36
Build 34786,470,130 - 86,493,682NCBI
Celera781,530,357 - 81,553,909 (-)NCBICelera
Cytogenetic Map7q21.12NCBI
HuRef781,436,464 - 81,460,052 (-)NCBIHuRef
CHM1_1786,755,502 - 86,778,704 (-)NCBICHM1_1
T2T-CHM13v2.0788,446,097 - 88,470,238 (-)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v2786,156,988 - 86,180,540 (-)NCBI
Tmem243
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3959,150,737 - 9,168,983 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl59,150,668 - 9,210,986 (+)EnsemblGRCm39 Ensembl
GRCm3859,100,737 - 9,118,983 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl59,100,668 - 9,160,986 (+)EnsemblGRCm38mm10GRCm38
MGSCv3759,100,737 - 9,118,983 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3659,106,743 - 9,124,989 (+)NCBIMGSCv36mm8
Celera59,017,375 - 9,035,335 (+)NCBICelera
Cytogenetic Map5A1NCBI
cM Map53.69NCBI
Tmem243
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8425,905,740 - 25,923,588 (-)NCBIGRCr8
mRatBN7.2424,950,791 - 24,968,642 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl424,950,791 - 24,968,642 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx429,967,532 - 29,985,355 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0425,893,798 - 25,911,621 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0424,268,657 - 24,286,443 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0421,902,803 - 21,920,651 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl421,902,803 - 21,920,651 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0421,834,167 - 21,852,015 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4421,369,696 - 21,387,544 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera420,448,239 - 20,466,571 (-)NCBICelera
Cytogenetic Map4q12NCBI
Tmem243
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495562142,121 - 50,628 (+)NCBIChiLan1.0ChiLan1.0
TMEM243
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11413,378,196 - 13,387,213 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1413,378,630 - 13,397,793 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1412,949,946 - 12,970,366 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01413,143,429 - 13,163,857 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1413,143,868 - 13,163,862 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11413,347,378 - 13,367,795 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01413,073,072 - 13,093,481 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01413,356,473 - 13,376,904 (-)NCBIUU_Cfam_GSD_1.0
Tmem243
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440511826,405,870 - 26,427,032 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367631,574,312 - 1,595,523 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049367631,574,372 - 1,664,339 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TMEM243
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl993,393,722 - 93,416,627 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1993,393,695 - 93,416,634 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.29102,873,776 - 102,896,734 (+)NCBISscrofa10.2Sscrofa10.2susScr3
TMEM243
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12161,722,078 - 61,744,605 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2161,722,206 - 61,744,126 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604242,312,874 - 42,335,462 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Tmem243
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462473934,631,269 - 34,652,654 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


RefSeq Acc Id: ENSPPAT00000063221   ⟹   ENSPPAP00000040305
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl792,836,440 - 92,860,583 (-)Ensembl
RefSeq Acc Id: XM_003822732   ⟹   XP_003822780
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v26105,070,719 - 105,094,908 (-)NCBI
NHGRI_mPanPan17153,335,357 - 153,359,543 (-)NCBI
Mhudiblu_PPA_v0779,178,806 - 79,210,009 (-)NCBI
PanPan1.1792,836,440 - 92,860,583 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008976317   ⟹   XP_008974565
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v26105,070,719 - 105,094,923 (-)NCBI
NHGRI_mPanPan17153,335,357 - 153,359,558 (-)NCBI
Mhudiblu_PPA_v0779,178,806 - 79,210,021 (-)NCBI
PanPan1.1792,836,440 - 92,860,583 (-)NCBI
Sequence:
RefSeq Acc Id: XM_034964360   ⟹   XP_034820251
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v26105,070,719 - 105,094,907 (-)NCBI
NHGRI_mPanPan17153,335,357 - 153,359,543 (-)NCBI
Mhudiblu_PPA_v0779,178,806 - 79,209,774 (-)NCBI
RefSeq Acc Id: XM_055114632   ⟹   XP_054970607
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v26105,072,363 - 105,094,911 (-)NCBI
NHGRI_mPanPan17153,337,001 - 153,359,543 (-)NCBI
RefSeq Acc Id: XM_055114633   ⟹   XP_054970608
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v26105,072,363 - 105,094,920 (-)NCBI
NHGRI_mPanPan17153,337,001 - 153,359,558 (-)NCBI
RefSeq Acc Id: XM_055114635   ⟹   XP_054970610
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v26105,072,363 - 105,094,672 (-)NCBI
NHGRI_mPanPan17153,337,001 - 153,359,308 (-)NCBI
RefSeq Acc Id: XM_063606282   ⟹   XP_063462352
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v26105,070,719 - 105,094,913 (-)NCBI
RefSeq Acc Id: XP_003822780   ⟸   XM_003822732
- Peptide Label: isoform X2
- UniProtKB: A0A2R9CEE1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008974565   ⟸   XM_008976317
- Peptide Label: isoform X2
- UniProtKB: A0A2R9CEE1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_034820251   ⟸   XM_034964360
- Peptide Label: isoform X2
- UniProtKB: A0A2R9CEE1 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSPPAP00000040305   ⟸   ENSPPAT00000063221
RefSeq Acc Id: XP_054970608   ⟸   XM_055114633
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054970607   ⟸   XM_055114632
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054970610   ⟸   XM_055114635
- Peptide Label: isoform X1
RefSeq Acc Id: XP_063462352   ⟸   XM_063606282
- Peptide Label: isoform X1


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000042815 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000063221.1 UniProtKB/TrEMBL
InterPro DUF2678 UniProtKB/TrEMBL
KEGG Report pps:100978513 UniProtKB/TrEMBL
NCBI Gene TMEM243 ENTREZGENE
PANTHER PTHR28603 UniProtKB/TrEMBL
  TRANSMEMBRANE PROTEIN 243 UniProtKB/TrEMBL
Pfam DUF2678 UniProtKB/TrEMBL
UniProt A0A2R9CEE1 ENTREZGENE, UniProtKB/TrEMBL