PTGER1 (prostaglandin E receptor 1) - Rat Genome Database

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Pathways
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Gene: PTGER1 (prostaglandin E receptor 1) Pan paniscus
Analyze
Symbol: PTGER1
Name: prostaglandin E receptor 1
RGD ID: 11751754
Description: ENCODES a protein that exhibits D1 dopamine receptor binding (ortholog); prostaglandin E receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating dopamine receptor signaling pathway (ortholog); response to lipopolysaccharide (ortholog); ASSOCIATED WITH adenocarcinoma (ortholog); Animal Mammary Neoplasms (ortholog); Experimental Mammary Neoplasms (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: prostaglandin E2 receptor EP1 subtype
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22019,402,243 - 19,406,282 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11918,404,124 - 18,407,438 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01914,035,876 - 14,038,812 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11914,879,798 - 14,881,969 (-)NCBIpanpan1.1PanPan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
PTGER1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22019,402,243 - 19,406,282 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11918,404,124 - 18,407,438 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01914,035,876 - 14,038,812 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11914,879,798 - 14,881,969 (-)NCBIpanpan1.1PanPan1.1panPan2
PTGER1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381914,472,466 - 14,475,354 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1914,472,466 - 14,475,354 (-)EnsemblGRCh38hg38GRCh38
GRCh371914,583,278 - 14,586,166 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361914,444,278 - 14,447,174 (-)NCBINCBI36Build 36hg18NCBI36
Build 341914,444,278 - 14,447,174NCBI
Celera1914,477,399 - 14,480,295 (-)NCBICelera
Cytogenetic Map19p13.12NCBI
HuRef1914,153,393 - 14,156,289 (-)NCBIHuRef
CHM1_11914,583,257 - 14,586,164 (-)NCBICHM1_1
T2T-CHM13v2.01914,599,099 - 14,601,987 (-)NCBIT2T-CHM13v2.0
Ptger1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39884,393,171 - 84,399,385 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl884,393,307 - 84,399,382 (+)EnsemblGRCm39 Ensembl
GRCm38883,666,644 - 83,672,756 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl883,666,678 - 83,672,753 (+)EnsemblGRCm38mm10GRCm38
MGSCv37886,190,539 - 86,194,002 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36886,556,745 - 86,560,208 (+)NCBIMGSCv36mm8
Celera887,957,431 - 87,960,894 (+)NCBICelera
Cytogenetic Map8C2NCBI
cM Map840.22NCBI
Ptger1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81941,374,983 - 41,379,593 (-)NCBIGRCr8
mRatBN7.21924,470,258 - 24,473,687 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1924,467,532 - 24,473,559 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1931,291,382 - 31,294,683 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01931,945,803 - 31,949,104 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01934,168,630 - 34,171,931 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01924,799,422 - 24,803,373 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1924,800,072 - 24,803,373 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01935,779,098 - 35,782,528 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41926,160,729 - 26,163,156 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11926,165,447 - 26,167,982 (-)NCBI
Celera1924,013,194 - 24,016,495 (-)NCBICelera
Cytogenetic Map19q11NCBI
Ptger1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541533,063,052 - 33,067,580 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541533,063,052 - 33,067,580 (-)NCBIChiLan1.0ChiLan1.0
PTGER1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12048,156,055 - 48,159,838 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2048,157,973 - 48,159,921 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2048,030,811 - 48,039,003 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02048,673,636 - 48,681,830 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2048,661,602 - 48,678,490 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12047,888,190 - 47,893,357 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02048,311,534 - 48,319,721 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02048,554,374 - 48,562,556 (+)NCBIUU_Cfam_GSD_1.0
Ptger1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118207,335,030 - 207,342,686 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366593,012,012 - 3,018,275 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366593,014,633 - 3,018,617 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PTGER1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl264,797,216 - 64,800,458 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1264,796,944 - 64,800,199 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2265,154,866 - 65,156,438 (-)NCBISscrofa10.2Sscrofa10.2susScr3
PTGER1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1613,131,328 - 13,134,457 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl613,131,424 - 13,133,190 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660746,519,439 - 6,524,611 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_034945337   ⟹   XP_034801228
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22019,402,243 - 19,406,282 (-)NCBI
NHGRI_mPanPan11918,404,124 - 18,407,438 (-)NCBI
Mhudiblu_PPA_v01914,035,876 - 14,038,812 (-)NCBI
RefSeq Acc Id: XM_063599959   ⟹   XP_063456029
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22019,402,243 - 19,406,282 (-)NCBI
Protein Sequences
Protein RefSeqs XP_034801228 (Get FASTA)   NCBI Sequence Viewer  
  XP_063456029 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_034801228   ⟸   XM_034945337
RefSeq Acc Id: XP_063456029   ⟸   XM_063599959


Additional Information

Database Acc Id Source(s)
NCBI Gene PTGER1 ENTREZGENE