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Gene: SLIT2 (slit guidance ligand 2) Pan paniscus

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Symbol:

SLIT2

Name:

slit guidance ligand 2

RGD ID:

11751115

Description:

ENCODES a protein that exhibits chemorepellent activity (ortholog); heparan sulfate proteoglycan binding (ortholog); INVOLVED IN aortic valve morphogenesis (ortholog); axon guidance (ortholog); axonogenesis (ortholog); PARTICIPATES IN glypican signaling pathway; ASSOCIATED WITH acute promyelocytic leukemia (ortholog); anti-basement membrane glomerulonephritis (ortholog); atrial fibrillation (ortholog); FOUND IN axon (ortholog); cell body (ortholog); cell projection (ortholog)

Type:

protein-coding

RefSeq Status:

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	SLIT2 (slit guidance ligand 2)	NCBI	Ortholog
Mus musculus (house mouse):	Slit2 (slit guidance ligand 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Slit2 (slit guidance ligand 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Slit2 (slit guidance ligand 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	SLIT2 (slit guidance ligand 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Slit2 (slit guidance ligand 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	SLIT2 (slit guidance ligand 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	SLIT2 (slit guidance ligand 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Slit2 (slit guidance ligand 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly

Position:

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	3	20,490,764 - 20,869,771 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	4	20,698,666 - 21,066,091 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	4	14,654,448 - 15,023,708 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	4	19,946,369 - 20,314,656 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	4	20,158,952 - 20,314,656 (+)	Ensembl	panpan1.1		panPan2

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

acute promyelocytic leukemia (ISO)

anti-basement membrane glomerulonephritis (ISO)

atrial fibrillation (ISO)

Brain Hypoxia-Ischemia (ISO)

Brain Injuries (ISO)

CAKUT (ISO)

Cancer Pain (ISO)

Cardiac Fibrosis (ISO)

Carotid Artery Injuries (ISO)

congenital diaphragmatic hernia (ISO)

cystic kidney disease (ISO)

dermatomyositis (ISO)

diabetic retinopathy (ISO)

genetic disease (ISO)

hepatocellular carcinoma (ISO)

Kartagener syndrome (ISO)

lung small cell carcinoma (ISO)

polymyositis (ISO)

primary ciliary dyskinesia (ISO)

proliferative diabetic retinopathy (ISO)

Spinal Cord Injuries (ISO)

temporal lobe epilepsy (ISO)

transient cerebral ischemia (ISO)

ventricular septal defect (ISO)

visceral heterotaxy (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

aortic valve morphogenesis (ISO)

apoptotic process involved in luteolysis (IEA)

axon extension involved in axon guidance (IEA)

axon guidance (IEA,ISO)

axonogenesis (ISO)

branching morphogenesis of an epithelial tube (IEA)

cell differentiation (IEA)

cell migration involved in sprouting angiogenesis (IEA)

cell-cell adhesion (ISO)

cellular response to heparin (IEA)

cellular response to hormone stimulus (IEA)

cellular response to hypoxia (ISO)

cellular response to platelet-derived growth factor stimulus (ISO)

chemorepulsion involved in embryonic olfactory bulb interneuron precursor migration (ISO)

chemorepulsion involved in postnatal olfactory bulb interneuron migration (IEA)

corticospinal neuron axon guidance through spinal cord (IEA)

dorsal/ventral axon guidance (ISO)

in utero embryonic development (ISO)

induction of negative chemotaxis (IEA)

kidney development (ISO)

mammary duct terminal end bud growth (ISO)

mammary gland duct morphogenesis (ISO)

metanephros development (ISO)

motor neuron axon guidance (IEA)

negative chemotaxis (IEA,ISO)

negative regulation of actin filament polymerization (IEA)

negative regulation of axon extension (ISO)

negative regulation of cell growth (IEA)

negative regulation of cell migration (IEA)

negative regulation of cell population proliferation (ISO)

negative regulation of cellular response to growth factor stimulus (IEA)

negative regulation of chemokine-mediated signaling pathway (IEA)

negative regulation of endothelial cell migration (IEA)

negative regulation of gene expression (ISO)

negative regulation of lamellipodium assembly (IEA)

negative regulation of leukocyte chemotaxis (IEA)

negative regulation of monocyte chemotaxis (ISO)

negative regulation of mononuclear cell migration (IEA)

negative regulation of neutrophil chemotaxis (IEA)

negative regulation of protein phosphorylation (ISO)

negative regulation of retinal ganglion cell axon guidance (IEA)

negative regulation of small GTPase mediated signal transduction (IEA)

negative regulation of smooth muscle cell chemotaxis (IEA)

negative regulation of smooth muscle cell migration (IEA)

negative regulation of vascular permeability (IEA)

nervous system development (IEA)

neuron projection extension (ISO)

neuron projection morphogenesis (ISO)

olfactory bulb development (ISO)

positive regulation of apoptotic process (IEA)

positive regulation of synapse assembly (ISO)

pulmonary valve morphogenesis (ISO)

response to cortisol (IEA)

response to nutrient levels (ISO)

retinal ganglion cell axon guidance (IEA,ISO)

Roundabout signaling pathway (IEA)

spinal cord development (ISO)

synapse maturation (ISO)

telencephalon cell migration (ISO)

ureteric bud development (IEA)

ventricular septum morphogenesis (ISO)

Cellular Component

axon (ISO)

cell body (ISO)

cell projection (ISO)

cell surface (ISO)

cytoplasm (IEA)

dendrite (ISO)

extracellular space (IEA)

neuronal cell body (ISO)

perisynaptic extracellular matrix (ISO)

Molecular Function

calcium ion binding (IEA)

chemorepellent activity (ISO)

GTPase inhibitor activity (IEA)

heparan sulfate proteoglycan binding (ISO)

heparin binding (IEA)

identical protein binding (IEA)

laminin-1 binding (IEA)

protein binding (ISO)

protein homodimerization activity (IEA)

proteoglycan binding (IEA)

Roundabout binding (IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

glypican signaling pathway (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

SLIT2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	3	20,490,764 - 20,869,771 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	4	20,698,666 - 21,066,091 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	4	14,654,448 - 15,023,708 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	4	19,946,369 - 20,314,656 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	4	20,158,952 - 20,314,656 (+)	Ensembl	panpan1.1		panPan2

SLIT2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	4	20,251,905 - 20,620,561 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	4	20,251,905 - 20,620,561 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	4	20,253,528 - 20,622,184 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	4	19,864,333 - 20,229,886 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	4	19,931,503 - 20,297,057	NCBI
Celera	4	20,712,350 - 21,077,291 (+)	NCBI		Celera
Cytogenetic Map	4	p15.31	NCBI
HuRef	4	19,604,199 - 19,969,514 (+)	NCBI		HuRef
CHM1_1	4	20,253,276 - 20,618,733 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	4	20,234,597 - 20,602,238 (+)	NCBI		T2T-CHM13v2.0

Slit2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	5	48,138,633 - 48,465,077 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	5	48,140,480 - 48,465,075 (+)	Ensembl		GRCm39 Ensembl
GRCm38	5	47,981,291 - 48,307,735 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	5	47,983,138 - 48,307,733 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	5	48,374,394 - 48,697,017 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	5	48,273,041 - 48,593,759 (+)	NCBI		MGSCv36	mm8
Celera	5	45,381,658 - 45,708,133 (+)	NCBI		Celera
Cytogenetic Map	5	B3	NCBI
cM Map	5	26.05	NCBI

Slit2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	14	66,829,661 - 67,168,517 (-)	NCBI		GRCr8
mRatBN7.2	14	62,616,337 - 62,955,934 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	14	62,617,067 - 62,955,948 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	14	67,016,997 - 67,353,404 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	14	68,330,637 - 68,667,055 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	14	64,727,393 - 65,063,822 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	14	66,831,848 - 67,171,491 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	14	66,831,848 - 67,170,361 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	14	66,864,065 - 67,202,691 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	14	67,546,283 - 67,891,840 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	14	67,624,799 - 67,894,206 (-)	NCBI
Celera	14	61,665,582 - 62,001,006 (-)	NCBI		Celera
Cytogenetic Map	14	q11	NCBI

Slit2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955480	3,984,586 - 4,313,908 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955480	3,982,977 - 4,314,160 (-)	NCBI	ChiLan1.0	ChiLan1.0

SLIT2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	3	88,964,707 - 89,311,817 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	3	88,966,232 - 89,312,955 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	3	91,423,926 - 91,773,328 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	3	89,948,981 - 90,297,465 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	3	89,948,988 - 90,298,073 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	3	89,094,518 - 89,443,898 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	3	89,179,097 - 89,528,769 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	3	89,562,948 - 89,912,569 (-)	NCBI		UU_Cfam_GSD_1.0

Slit2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405285	54,409,516 - 54,746,912 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936477	8,109,228 - 8,446,653 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936477	8,111,212 - 8,448,567 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SLIT2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	8	14,758,335 - 15,148,133 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	8	14,758,426 - 15,149,515 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	8	14,998,769 - 15,257,500 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

SLIT2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	27	29,650,589 - 30,020,105 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	27	29,650,337 - 29,803,612 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666047	76,267,556 - 76,654,726 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Slit2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624755	11,472,377 - 11,819,266 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624755	11,470,810 - 11,819,800 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_003826819	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_003826820	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_003826821	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008952162	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034958369	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063603740	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063603741	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JARIFH020000003	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSPPAT00000065452 ⟹ ENSPPAP00000042522

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	4	20,158,952 - 20,313,095 (+)	Ensembl

Ensembl Acc Id:

ENSPPAT00000065454 ⟹ ENSPPAP00000042524

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	4	20,162,356 - 20,314,656 (+)	Ensembl

Ensembl Acc Id:

ENSPPAT00000065455 ⟹ ENSPPAP00000042525

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	4	20,162,356 - 20,314,656 (+)	Ensembl

Ensembl Acc Id:

ENSPPAT00000065456 ⟹ ENSPPAP00000042526

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	4	20,162,357 - 20,313,095 (+)	Ensembl

Ensembl Acc Id:

ENSPPAT00000065457 ⟹ ENSPPAP00000042527

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	4	20,162,357 - 20,313,095 (+)	Ensembl

RefSeq Acc Id:

XM_003826819 ⟹ XP_003826867

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	3	20,490,764 - 20,869,771 (+)	NCBI
NHGRI_mPanPan1	4	20,698,666 - 21,066,091 (+)	NCBI
Mhudiblu_PPA_v0	4	14,654,448 - 15,023,708 (+)	NCBI
PanPan1.1	4	19,946,369 - 20,314,656 (+)	NCBI

Sequence:

show sequence

ACTTGGTGTTATTTATTTGGGAAGCGCCCGGACGGCGGAGCTTGGCGGCGGTGGTGGTGGCTGC
CGCAGACTGTGGTTAAAAAAAAAGAAGGCGGCGGCGGCGGCGGCGGCGGAGGCGGAGGCAGCTG
CGAGGCATGGGAGCGCCGAAGCGCCCAGGCGCAGGCCGGAGCTGCCGCGCTTTCTGGGCACGGC
GGGAGTGCTGAGCAGAAAGGGGAGCGCCGGGGGCCCGCAGCCGGCTCCGGAGGCGCGGGCCGGG
TTTTTGTTTGGCTACGCTGAGCGCCAGTCAGCCCCAGCGAACAACTCCAGTTACGACAACAACC
CACCTTCCTTCCAGACAAGCGAGACTTGGGCTGCTGCGTCCGTCCTATTGTTTAGACACTTGCC
AGGGGCTCCGGAGTCGGCAGAGCCACCGAGTCCCCGCTCTGAGTCGTCGCCCTCCCTCTCCCCC
ACCTCGCTCCCTGGAGCGGGAGGCCAGGAAAGCAGTGGGAGAGGAGAAGGGGCTAGAAGGAGAA
GGACTACTCGGGACTGCGGCCGCCGCGTCAGGTGCAGCGCCAGGAGCCGGGCGGCGTCGCCACG
CCGGCAGGGGTACCGCCACTGTGGCCTTGGGGGACGGGATTCAAAGCCTGGGAAAAGTTGCTGC
ACTTTGAGAAGGAAGAACCACTAGTGGGAGACCGCCGGGGGCCGGTCGTGGCTCTGCGCCCTCC
GGAACCCGGCTCTTGTTTCTTCTACCTTTGCCATCAGGTGTCTGCCGCGGAGCTGCGGCTTATC
CGGGAGACGAGCGGGGTTGACACGCGCGCACACACTACTGCCATTCAGCTGCCGCCTGGTTCTG
CCTGGAGTAGTGGATCCCACCCGCCCACCTGCCACCGAGCCATTCTCCGGTACGCCCCAGCAGG
ACGCTGACACCTCCAACCTTGGCCTTTGCCTTTCCACTCCTTCCAGTCTGCCTGGTTTTTAAGT
CCGCCCCCAGTCAGTCCCCACTCAGTCTTCGCAGCAGCTCTCATCCTCCACTTGGCCTCTTGGA
GTTCCTCGCCGGAGTGCTGACTAGTGGATATTTCTGCCCGGCTGCGGCGGCCCGACTGCCCTTT
TGTCTTTTCTGCGTGACCTCGGGGCAGGTCCTGGTGCAGAGCGTCGCCAAGGACGCCGAGCGGG
AGGCGGGATTGCCCAGACATCCTTCAGCGAAGTGCATGTGTGTTTGTAAACCATCGTTGGCTGT
CGGGAGACCGCGAGGACCGGCCCAGGCTGCGGCGGAGTCGAGGGCGGGGGAGAGGCCGCGGGAG
TGAGCAGAGTCCAGAGCCGTGCGCCCCCAGAACTGCGCGTCCGCCCCGTGCACCCCCGCGCGCC
ATGCCCAGTTGCTCCGCGCGCTCTGCTACGGGCCCGCTGGGCTTCCGCGCCTTCTAGCTTCCGG
AGCCCACTTTGATCGGGGCCATAATACCTACTGAGATCCCCTCTTCTGTCTTTTATCTTCGCCA
CTGGCATCGGATTTGTAGAAGCGTGCGTGGGATCAGAGGACCGCCCTCCCCCCCACAACCGGCC
CCTGCATCTTAGCGGCCGTTGGAAGCCCCAGCTCTTTTACCGCCAAGTTCATCCTTGGGAGACA
GAAGACGCGTGATCTCCTCTCCGCTGCTCTTGGGGTCTCCTTGCAGCCCTGGCCAGGCGGATTC
ATCCTCAGGACCTAAAGTTGCCCAAGGAGCTCCTGCTCTGCCAGAGGAGGGTGGAGAGGGCGGT
GGGAGGCGTGTGCCTGAGTGGGCTCTACGGCCTTGTTCCATATTATTTTGTGCACATTTTCCCT
GGCACTCTGGGTTGCTAGCCCCGTCGGGCACTGGGCCTCAGACACTGCGCGGTTCCCTCGGAGC
AGCAAGCTAAAGAAAGCCCCCAGTGCCGCCGAGGAAGGAGGCGGCGGGGAAAGATGCGCGGCGT
TGGCTGGCAGATGCTGTCCCTGTCGCTGGGGTTAGTGCTGGCGATCCTGAACAAGGTGGCACCG
CAGGCGTGCCCGGCGCAGTGCTCCTGCTCGGGCAGCACAGTGGACTGTCACGGGCTGGCGCTGC
GCAGCGTGCCCAGGAATATCCCCCGCAACACCGAGAGACTGGATTTAAATGGAAATAACATCAC
AAGAATTACGAAGACAGATTTTGCTGGTCTTAGACATCTAAGAGTTCTTCAGCTTATGGAGAAT
AAGATTAGCACCATTGAAAGAGGAGCATTCCAGGATCTTAAAGAACTAGAGAGACTGCGTTTAA
ACAGAAATCACCTTCAGCTGTTTCCTGAGTTGCTGTTTCTTGGGACTGCGAAGCTATACAGGCT
TGATCTCAGTGAAAACCAAATTCAGGCAATCCCAAGGAAAGCTTTCCGTGGGGCAGTTGACATA
AAAAATTTGCAACTGGATTACAACCAGATCAGCTGTATTGAAGATGGGGCATTCAGGGCTCTCC
GGGACCTGGAAGTGCTCACTCTCAACAATAACAACATTACTAGACTCTCTGTGGCAAGTTTCAA
CCATATGCCTAAACTTAGGACTTTTCGACTGCATTCAAACAACCTGTATTGTGACTGCCACCTG
GCCTGGCTCTCCGACTGGCTTCGCCAAAGGCCTCGGGTTGGTCTGTACACTCAGTGTATGGGCC
CCTCCCACCTGAGAGGCCATAATGTAGCCGAGGTTCAAAAACGAGAATTTGTCTGCAGTGGTCA
CCAGTCATTTATGGCTCCTTCTTGTAGTGTTTTGCACTGCCCTGCCGCCTGTACCTGTAGCAAC
AATATCGTAGACTGTCGTGGGAAAGGTCTCACTGAGATCCCCACAAATCTTCCAGAGACCATCA
CAGAAATACGTTTGGAACAGAACACAATCAAAGTCATCCCTCCTGGAGCTTTCTCACCATATAA
AAAGCTTAGACGAATCGACCTGAGCAATAATCAGATCTCTGAACTTGCACCAGATGCTTTCCAA
GGACTACGCTCTCTGAATTCACTTGTCCTCTATGGAAATAAAATCACAGAACTCCCCAAAAGTT
TATTTGAAGGACTGTTTTCCTTACAGCTCCTATTATTGAATGCCAACAAGATAAACTGCCTTCG
GGTAGATGCTTTTCAGGATCTCCACAACTTGAACCTTCTCTCCCTATATGACAACAAGCTTCAG
ACCATCGCCAAGGGGACCTTTTCACCTCTTCGGGCCATTCAAACTATGCATTTGGCCCAGAACC
CCTTTATTTGTGACTGCCATCTCAAGTGGCTAGCGGATTATCTCCATACCAACCCGATTGAGAC
CAGTGGTGCCCGTTGCACCAGCCCCCGCCGCCTGGCAAACAAAAGAATTGGACAGATCAAAAGC
AAGAAATTCCGTTGTTCAGCTAAAGAACAGTATTTCATTCCAGGTACAGAAGATTATCGATCAA
AATTAAGTGGAGACTGCTTTGCGGATCTGGCTTGCCCTGAAAAGTGTCGCTGTGAAGGAACCAC
AGTAGATTGCTCTAATCAAAAGCTCAACAAAATCCCGGAGCACATTCCCCAGTACACTGCAGAG
TTGCGTCTCAATAATAATGAATTTACCGTGTTGGAAGCCACAGGAATCTTTAAGAAACTTCCTC
AATTACGTAAAATAAACTTTAGCAACAATAAGATCACAGATATTGAGGAGGGAGCATTTGAAGG
AGCATCTGGTGTAAATGAAATACTTCTTACGAGTAATCGTTTGGAAAATGTGCAGCATAAGATG
TTCAAGGGATTGGAAAGCCTCAAAACTTTGATGTTGAGAAGCAATCGAATAACCTGTGTGGGGA
ATGACAGTTTCATAGGACTCAGTTCTGTGCGTTTGCTTTCTTTGTATGATAATCAAATTACTAC
AGTTGCACCAGGGGCATTTGATACTCTCCATTCTTTATCTACTCTAAACCTCTTGGCCAATCCT
TTTAACTGTAACTGCTACCTGGCTTGGTTGGGAGAGTGGCTGAGAAAGAAGAGAATTGTCACGG
GAAATCCTAGATGTCAAAAACCATACTTCCTGAAAGAAATACCCATCCAGGATGTGGCCATTCA
GGACTTCACTTGTGATGACGGAAATGATGACAATAGTTGCTCCCCACTTTCTCGCTGTCCTACT
GAATGTACTTGCTTGGATACAGTTGTCCGATGTAGCAACAAGGGTTTGAAGGTCTTGCCGAAAG
GTATTCCAAGAGATGTCACAGAGTTGTATCTGGATGGAAACCAATTTATGCTGGTTCCCAAGGA
ACTCTCCAACTACAAACATTTAACACTTATAGACTTAAGTAACAACAGAATAAGCACGCTTTCT
AATCAGAGCTTCAGCAACATGACCCAGCTCCTCACCTTAATTCTTAGTTACAACCGTCTGAGAT
GTATTCCTCCTCGCACCTTTGATGGATTAAAGTCTCTTCGATTACTTTCTCTACATGGAAATGA
CATTTCTGTTGTGCCTGAAGGTGCTTTCAATGATCTATCTGCATTATCACATCTAGCAATTGGA
GCCAACCCTCTTTACTGTGATTGTAACATGCAGTGGTTATCCGACTGGGTGAAGTCGGAATATA
AGGAGCCTGGAATTGCTCGTTGTGCTGGTCCTGGAGAAATGGCAGATAAACTTTTACTCACAAC
TCCCTCCAAAAAATTTACCTGTCAAGGTCCTGTGGATGTCAATATTCTAGCTAAATGTAACCCC
TGCCTATCAAATCCGTGTAAAAATGATGGCACATGTAATAGTGATCCAGTTGACTTTTACCGAT
GCACCTGTCCATATGGTTTCAAGGGGCAGGACTGTGATGTCCCAATTCATGCCTGCATCAGTAA
CCCATGTAAACATGGAGGAACTTGCCACTTAAAAGAAGGAGAAGAAGATGGATTCTGGTGTATT
TGTGCTGATGGATTTGAAGGAGAAAATTGTGAAGTCAACGTTGATGATTGTGAAGATAATGACT
GTGAAAATAATTCTACATGTGTCGATGGCATTAATAACTACACATGCCTTTGCCCACCTGAGTA
TACAGGTGAGTTGTGTGAGGAGAAGCTGGACTTCTGTGCCCAGGACCTGAACCCCTGCCAGCAT
GACTCAAAGTGCATCCTAACTCCAAAGGGATTCAAATGTGACTGCACACCAGGGTACGTAGGTG
AACACTGTGACATCGATTTTGACGACTGCCAAGACAACAAGTGTAAAAACGGAGCCCACTGCAC
GGATGCAGTGAACGGCTATACGTGCATATGCCCCGAAGGTTACAGTGGCTTGTTCTGTGAGTTT
TCTCCACCCATGGTCCTCCCTCGTACCAGCCCGTGTGATAATTTTGATTGTCAGAATGGAGCTC
AGTGTATCGTCAGAATAAATGAGCCAATATGTCAGTGTTTGCCTGGCTATCAGGGAGAAAAGTG
TGAAAAATTGGTCAGTGTGAATTTTATAAACAAAGAGTCTTATCTTCAGATTCCTTCAGCCAAG
GTTCGGCCTCAGACGAACATAACACTTCAGATTGCCACAGATGAAGACAGTGGAATCCTCCTGT
ATAAGGGTGACAAAGACCATATCGCGGTAGAACTCTATCGGGGGCGTGTTCGTGCCAGCTATGA
CACCGGCTCTCACCCAGCTTCTGCCATTTACAGTGTGGAGACAATCAATGATGGAAACTTCCAC
ATTGTGGAACTACTCGCCTTGGATCAGAGTCTCTCTTTGTCCGTGGATGGTGGGAACCCCAAAA
TCATCACTAACTTGTCAAAGCAGTCCACTCTGAATTTTGACTCTCCACTCTATGTAGGAGGCAT
GCCAGGGAAGAGTAACGTGGCATCTCTGCGCCAGGCCCCTGGGCAGAACGGAACCAGCTTCCAC
GGCTGCATCCGGAACCTTTACATCAACAGTGAGCTGCAGGACTTCCAGAAGGTACCGATGCAAA
CAGGCATTTTGCCTGGCTGTGAGCCATGCCACAAGAAGGTGTGTGCCCATGGCACATGCCAGCC
CAGCAGCCAGGCAGGCTTCACCTGCGAGTGCCAGGAAGGATGGATGGGACCCCTCTGTGACCAA
CGGACCAATGACCCTTGCCTTGGAAATAAATGCGTACATGGCACCTGCTTGCCCATCAATGCGT
TCTCCTACAGCTGTAAGTGCTTGGAGGGCCATGGAGGTGTCCTCTGTGATGAAGAGGAGGATCT
GTTTAACCCGTGCCAGGCGATCAAGTGCAAGCATGGGAAGTGCAGGCTTTCAGGTCTAGGGCAA
CCCTACTGTGAATGCAGCAGTGGATACACGGGGGACAGCTGTGATCGAGAAATCTCTTGTCGAG
GGGAAAGGATAAGAGATTATTACCAAAAGCAGCAGGGCTATGCTGCTTGCCAAACAACCAAGAA
GGTGTCCCGATTAGAGTGCAGAGGTGGGTGTGCAGGAGGGCAGTGCTGTGGACCGCTGAGGAGC
AAGCGGCGGAAATACTCTTTCGAATGCACTGACGGCTCCTCCTTTGTGGACGAGGTTGAGAAAG
TGGTGAAGTGCGGCTGTACGAGGTGTGTGTCCTAAACACACTCCCGGCAGCTCTGTCTTTGGAA
AAGGTTGTATACTTCTTGACCATGTGGGACTAATGAATGCTTCATAGTGGAAATATTTGAAATA
TATTGTAAAATACAGAACAGACTTATTTTTATTATGAGAATAAAGACTTTTTTTTCTGCATTTG
GAAAAAAAAAAAAAGAAATGCTTGAACTAAAGCTTCCCCTATGCTGGAGAAGTATGAAGAAAGA
TATACCTGGAGACATTAGAACAGCGATGGGAACCATTGCAACTCGGGTCCATCTTTGTAACATG
CTGAAGACAAGCAGAAGCACATGCACGAGGGACAGAGGAGCTACTGTGCACTGCTGTGAAATTG
CCCAGATCATAAAACCTGTGTACCCTCCTTCACATCAACCAAGTTCACTAGGACATACCAAGCA
CATGTGTGTGAATGAGGATGCAAGGCAAGAGAACGGAACTCCAGAATTCACAGATAGAACAAAT
GGATGAGAAATATTTCATGCAAAATATAAAGTGTCCTGAGGATCTGGGTTCCATTTACGAGAGG
AAATGAAAGTGCTAAAATAAATTTTATCTTCCTTTTAAATGTCAGCATGTCAGCAGAAGCAGCA
CACAAAAGTCTTTACCATTTTCCAGTATTAATTTTTTGTAATATAAATGATAAAGGAGATGATA
AAGAACCAATAGATTATTGATAAATAAATTAGTAATAATATGATTTTTTGTTTCTATGAGTTCT
AAACAGCCCTATACAGTATTCAGTTTCCATGAGAAATATTTATTGTATCAAAGTACATTGTACT
TAACATTTTAGGCCATCCTTTTACTGTTCCTTGATGCTTTAATATATATTAATTTATAATTATC
CTGATATTTTTGTACATTTTTCAAACTTAAAAATCAGGATTTTTTTTTTTTTTTTTTTTTGGTC
AATAGTACTAACATAGGGTTTTATCTTGGGATAAATATGTGTTGGTCTGTTTGTTGACCTTGAC
ATCTGATCACTGATGTCAATGACCTACTGGCCTCATTCAGGACACCTGCAGAGAGTATGCAAAG
TCCGAGAGAGGAAAACAGAAATCTGTATGTGAGATGGTCATTGTACAGAAAGAAGTGGCCCCTC
TGCAACATGTCCTCACAGAAACGAAATGGTGTGTAGCAATCAACACTAGAAAGTAGACCTTTTG
CAAATTAATATGTCCTTGACCTTTTTTGCCCTTTTCTGCCCTTTTCTGGGGGTGGGGTGGGGAT
AAAAAGACTGTCATATCAAGAACTGTGACTTTTCTTTCCCTCGAACAATAAAACTCCTTTATTA
TCTTAATGCTCCCATGTTAACATGTTTGCTGCTAAATTACAATGTAGAATTGATAATGATTTAT
AGTGAACCGTGCTCTTCCCTCATTAAAATCCCAGGGTGCCCTGTAAAGATGCAGATGTTTCTTC
CTGAAAACTTCTTTTTTTACAAAGAAAATTAGATGTACATGTATAATTCAGTGTGCTTTGTCTT
TCTCCAGATTAATATCGGTTACACTGCTGATGTTTGTAAATTAAACAGATATTTACTTCA

hide sequence

RefSeq Acc Id:

XM_003826821 ⟹ XP_003826869

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	3	20,490,765 - 20,869,771 (+)	NCBI
NHGRI_mPanPan1	4	20,698,666 - 21,066,091 (+)	NCBI
Mhudiblu_PPA_v0	4	14,654,448 - 15,023,708 (+)	NCBI
PanPan1.1	4	19,946,369 - 20,314,656 (+)	NCBI

Sequence:

show sequence

ACTTGGTGTTATTTATTTGGGAAGCGCCCGGACGGCGGAGCTTGGCGGCGGTGGTGGTGGCTGC
CGCAGACTGTGGTTAAAAAAAAAGAAGGCGGCGGCGGCGGCGGCGGCGGAGGCGGAGGCAGCTG
CGAGGCATGGGAGCGCCGAAGCGCCCAGGCGCAGGCCGGAGCTGCCGCGCTTTCTGGGCACGGC
GGGAGTGCTGAGCAGAAAGGGGAGCGCCGGGGGCCCGCAGCCGGCTCCGGAGGCGCGGGCCGGG
TTTTTGTTTGGCTACGCTGAGCGCCAGTCAGCCCCAGCGAACAACTCCAGTTACGACAACAACC
CACCTTCCTTCCAGACAAGCGAGACTTGGGCTGCTGCGTCCGTCCTATTGTTTAGACACTTGCC
AGGGGCTCCGGAGTCGGCAGAGCCACCGAGTCCCCGCTCTGAGTCGTCGCCCTCCCTCTCCCCC
ACCTCGCTCCCTGGAGCGGGAGGCCAGGAAAGCAGTGGGAGAGGAGAAGGGGCTAGAAGGAGAA
GGACTACTCGGGACTGCGGCCGCCGCGTCAGGTGCAGCGCCAGGAGCCGGGCGGCGTCGCCACG
CCGGCAGGGGTACCGCCACTGTGGCCTTGGGGGACGGGATTCAAAGCCTGGGAAAAGTTGCTGC
ACTTTGAGAAGGAAGAACCACTAGTGGGAGACCGCCGGGGGCCGGTCGTGGCTCTGCGCCCTCC
GGAACCCGGCTCTTGTTTCTTCTACCTTTGCCATCAGGTGTCTGCCGCGGAGCTGCGGCTTATC
CGGGAGACGAGCGGGGTTGACACGCGCGCACACACTACTGCCATTCAGCTGCCGCCTGGTTCTG
CCTGGAGTAGTGGATCCCACCCGCCCACCTGCCACCGAGCCATTCTCCGGTACGCCCCAGCAGG
ACGCTGACACCTCCAACCTTGGCCTTTGCCTTTCCACTCCTTCCAGTCTGCCTGGTTTTTAAGT
CCGCCCCCAGTCAGTCCCCACTCAGTCTTCGCAGCAGCTCTCATCCTCCACTTGGCCTCTTGGA
GTTCCTCGCCGGAGTGCTGACTAGTGGATATTTCTGCCCGGCTGCGGCGGCCCGACTGCCCTTT
TGTCTTTTCTGCGTGACCTCGGGGCAGGTCCTGGTGCAGAGCGTCGCCAAGGACGCCGAGCGGG
AGGCGGGATTGCCCAGACATCCTTCAGCGAAGTGCATGTGTGTTTGTAAACCATCGTTGGCTGT
CGGGAGACCGCGAGGACCGGCCCAGGCTGCGGCGGAGTCGAGGGCGGGGGAGAGGCCGCGGGAG
TGAGCAGAGTCCAGAGCCGTGCGCCCCCAGAACTGCGCGTCCGCCCCGTGCACCCCCGCGCGCC
ATGCCCAGTTGCTCCGCGCGCTCTGCTACGGGCCCGCTGGGCTTCCGCGCCTTCTAGCTTCCGG
AGCCCACTTTGATCGGGGCCATAATACCTACTGAGATCCCCTCTTCTGTCTTTTATCTTCGCCA
CTGGCATCGGATTTGTAGAAGCGTGCGTGGGATCAGAGGACCGCCCTCCCCCCCACAACCGGCC
CCTGCATCTTAGCGGCCGTTGGAAGCCCCAGCTCTTTTACCGCCAAGTTCATCCTTGGGAGACA
GAAGACGCGTGATCTCCTCTCCGCTGCTCTTGGGGTCTCCTTGCAGCCCTGGCCAGGCGGATTC
ATCCTCAGGACCTAAAGTTGCCCAAGGAGCTCCTGCTCTGCCAGAGGAGGGTGGAGAGGGCGGT
GGGAGGCGTGTGCCTGAGTGGGCTCTACGGCCTTGTTCCATATTATTTTGTGCACATTTTCCCT
GGCACTCTGGGTTGCTAGCCCCGTCGGGCACTGGGCCTCAGACACTGCGCGGTTCCCTCGGAGC
AGCAAGCTAAAGAAAGCCCCCAGTGCCGCCGAGGAAGGAGGCGGCGGGGAAAGATGCGCGGCGT
TGGCTGGCAGATGCTGTCCCTGTCGCTGGGGTTAGTGCTGGCGATCCTGAACAAGGTGGCACCG
CAGGCGTGCCCGGCGCAGTGCTCCTGCTCGGGCAGCACAGTGGACTGTCACGGGCTGGCGCTGC
GCAGCGTGCCCAGGAATATCCCCCGCAACACCGAGAGACTGGATTTAAATGGAAATAACATCAC
AAGAATTACGAAGACAGATTTTGCTGGTCTTAGACATCTAAGAGTTCTTCAGCTTATGGAGAAT
AAGATTAGCACCATTGAAAGAGGAGCATTCCAGGATCTTAAAGAACTAGAGAGACTGCGTTTAA
ACAGAAATCACCTTCAGCTGTTTCCTGAGTTGCTGTTTCTTGGGACTGCGAAGCTATACAGGCT
TGATCTCAGTGAAAACCAAATTCAGGCAATCCCAAGGAAAGCTTTCCGTGGGGCAGTTGACATA
AAAAATTTGCAACTGGATTACAACCAGATCAGCTGTATTGAAGATGGGGCATTCAGGGCTCTCC
GGGACCTGGAAGTGCTCACTCTCAACAATAACAACATTACTAGACTCTCTGTGGCAAGTTTCAA
CCATATGCCTAAACTTAGGACTTTTCGACTGCATTCAAACAACCTGTATTGTGACTGCCACCTG
GCCTGGCTCTCCGACTGGCTTCGCCAAAGGCCTCGGGTTGGTCTGTACACTCAGTGTATGGGCC
CCTCCCACCTGAGAGGCCATAATGTAGCCGAGGTTCAAAAACGAGAATTTGTCTGCAGTGGTCA
CCAGTCATTTATGGCTCCTTCTTGTAGTGTTTTGCACTGCCCTGCCGCCTGTACCTGTAGCAAC
AATATCGTAGACTGTCGTGGGAAAGGTCTCACTGAGATCCCCACAAATCTTCCAGAGACCATCA
CAGAAATACGTTTGGAACAGAACACAATCAAAGTCATCCCTCCTGGAGCTTTCTCACCATATAA
AAAGCTTAGACGAATCGACCTGAGCAATAATCAGATCTCTGAACTTGCACCAGATGCTTTCCAA
GGACTACGCTCTCTGAATTCACTTGTCCTCTATGGAAATAAAATCACAGAACTCCCCAAAAGTT
TATTTGAAGGACTGTTTTCCTTACAGCTCCTATTATTGAATGCCAACAAGATAAACTGCCTTCG
GGTAGATGCTTTTCAGGATCTCCACAACTTGAACCTTCTCTCCCTATATGACAACAAGCTTCAG
ACCATCGCCAAGGGGACCTTTTCACCTCTTCGGGCCATTCAAACTATGCATTTGGCCCAGAACC
CCTTTATTTGTGACTGCCATCTCAAGTGGCTAGCGGATTATCTCCATACCAACCCGATTGAGAC
CAGTGGTGCCCGTTGCACCAGCCCCCGCCGCCTGGCAAACAAAAGAATTGGACAGATCAAAAGC
AAGAAATTCCGTTGTTCAGGTACAGAAGATTATCGATCAAAATTAAGTGGAGACTGCTTTGCGG
ATCTGGCTTGCCCTGAAAAGTGTCGCTGTGAAGGAACCACAGTAGATTGCTCTAATCAAAAGCT
CAACAAAATCCCGGAGCACATTCCCCAGTACACTGCAGAGTTGCGTCTCAATAATAATGAATTT
ACCGTGTTGGAAGCCACAGGAATCTTTAAGAAACTTCCTCAATTACGTAAAATAAACTTTAGCA
ACAATAAGATCACAGATATTGAGGAGGGAGCATTTGAAGGAGCATCTGGTGTAAATGAAATACT
TCTTACGAGTAATCGTTTGGAAAATGTGCAGCATAAGATGTTCAAGGGATTGGAAAGCCTCAAA
ACTTTGATGTTGAGAAGCAATCGAATAACCTGTGTGGGGAATGACAGTTTCATAGGACTCAGTT
CTGTGCGTTTGCTTTCTTTGTATGATAATCAAATTACTACAGTTGCACCAGGGGCATTTGATAC
TCTCCATTCTTTATCTACTCTAAACCTCTTGGCCAATCCTTTTAACTGTAACTGCTACCTGGCT
TGGTTGGGAGAGTGGCTGAGAAAGAAGAGAATTGTCACGGGAAATCCTAGATGTCAAAAACCAT
ACTTCCTGAAAGAAATACCCATCCAGGATGTGGCCATTCAGGACTTCACTTGTGATGACGGAAA
TGATGACAATAGTTGCTCCCCACTTTCTCGCTGTCCTACTGAATGTACTTGCTTGGATACAGTT
GTCCGATGTAGCAACAAGGGTTTGAAGGTCTTGCCGAAAGGTATTCCAAGAGATGTCACAGAGT
TGTATCTGGATGGAAACCAATTTATGCTGGTTCCCAAGGAACTCTCCAACTACAAACATTTAAC
ACTTATAGACTTAAGTAACAACAGAATAAGCACGCTTTCTAATCAGAGCTTCAGCAACATGACC
CAGCTCCTCACCTTAATTCTTAGTTACAACCGTCTGAGATGTATTCCTCCTCGCACCTTTGATG
GATTAAAGTCTCTTCGATTACTTTCTCTACATGGAAATGACATTTCTGTTGTGCCTGAAGGTGC
TTTCAATGATCTATCTGCATTATCACATCTAGCAATTGGAGCCAACCCTCTTTACTGTGATTGT
AACATGCAGTGGTTATCCGACTGGGTGAAGTCGGAATATAAGGAGCCTGGAATTGCTCGTTGTG
CTGGTCCTGGAGAAATGGCAGATAAACTTTTACTCACAACTCCCTCCAAAAAATTTACCTGTCA
AGGTCCTGTGGATGTCAATATTCTAGCTAAATGTAACCCCTGCCTATCAAATCCGTGTAAAAAT
GATGGCACATGTAATAGTGATCCAGTTGACTTTTACCGATGCACCTGTCCATATGGTTTCAAGG
GGCAGGACTGTGATGTCCCAATTCATGCCTGCATCAGTAACCCATGTAAACATGGAGGAACTTG
CCACTTAAAAGAAGGAGAAGAAGATGGATTCTGGTGTATTTGTGCTGATGGATTTGAAGGAGAA
AATTGTGAAGTCAACGTTGATGATTGTGAAGATAATGACTGTGAAAATAATTCTACATGTGTCG
ATGGCATTAATAACTACACATGCCTTTGCCCACCTGAGTATACAGGTGAGTTGTGTGAGGAGAA
GCTGGACTTCTGTGCCCAGGACCTGAACCCCTGCCAGCATGACTCAAAGTGCATCCTAACTCCA
AAGGGATTCAAATGTGACTGCACACCAGGGTACGTAGGTGAACACTGTGACATCGATTTTGACG
ACTGCCAAGACAACAAGTGTAAAAACGGAGCCCACTGCACGGATGCAGTGAACGGCTATACGTG
CATATGCCCCGAAGGTTACAGTGGCTTGTTCTGTGAGTTTTCTCCACCCATGGTCCTCCCTCGT
ACCAGCCCGTGTGATAATTTTGATTGTCAGAATGGAGCTCAGTGTATCGTCAGAATAAATGAGC
CAATATGTCAGTGTTTGCCTGGCTATCAGGGAGAAAAGTGTGAAAAATTGGTCAGTGTGAATTT
TATAAACAAAGAGTCTTATCTTCAGATTCCTTCAGCCAAGGTTCGGCCTCAGACGAACATAACA
CTTCAGATTGCCACAGATGAAGACAGTGGAATCCTCCTGTATAAGGGTGACAAAGACCATATCG
CGGTAGAACTCTATCGGGGGCGTGTTCGTGCCAGCTATGACACCGGCTCTCACCCAGCTTCTGC
CATTTACAGTGTGGAGACAATCAATGATGGAAACTTCCACATTGTGGAACTACTCGCCTTGGAT
CAGAGTCTCTCTTTGTCCGTGGATGGTGGGAACCCCAAAATCATCACTAACTTGTCAAAGCAGT
CCACTCTGAATTTTGACTCTCCACTCTATGTAGGAGGCATGCCAGGGAAGAGTAACGTGGCATC
TCTGCGCCAGGCCCCTGGGCAGAACGGAACCAGCTTCCACGGCTGCATCCGGAACCTTTACATC
AACAGTGAGCTGCAGGACTTCCAGAAGGTACCGATGCAAACAGGCATTTTGCCTGGCTGTGAGC
CATGCCACAAGAAGGTGTGTGCCCATGGCACATGCCAGCCCAGCAGCCAGGCAGGCTTCACCTG
CGAGTGCCAGGAAGGATGGATGGGACCCCTCTGTGACCAACGGACCAATGACCCTTGCCTTGGA
AATAAATGCGTACATGGCACCTGCTTGCCCATCAATGCGTTCTCCTACAGCTGTAAGTGCTTGG
AGGGCCATGGAGGTGTCCTCTGTGATGAAGAGGAGGATCTGTTTAACCCGTGCCAGGCGATCAA
GTGCAAGCATGGGAAGTGCAGGCTTTCAGGTCTAGGGCAACCCTACTGTGAATGCAGCAGTGGA
TACACGGGGGACAGCTGTGATCGAGAAATCTCTTGTCGAGGGGAAAGGATAAGAGATTATTACC
AAAAGCAGCAGGGCTATGCTGCTTGCCAAACAACCAAGAAGGTGTCCCGATTAGAGTGCAGAGG
TGGGTGTGCAGGAGGGCAGTGCTGTGGACCGCTGAGGAGCAAGCGGCGGAAATACTCTTTCGAA
TGCACTGACGGCTCCTCCTTTGTGGACGAGGTTGAGAAAGTGGTGAAGTGCGGCTGTACGAGGT
GTGTGTCCTAAACACACTCCCGGCAGCTCTGTCTTTGGAAAAGGTTGTATACTTCTTGACCATG
TGGGACTAATGAATGCTTCATAGTGGAAATATTTGAAATATATTGTAAAATACAGAACAGACTT
ATTTTTATTATGAGAATAAAGACTTTTTTTTCTGCATTTGGAAAAAAAAAAAAAGAAATGCTTG
AACTAAAGCTTCCCCTATGCTGGAGAAGTATGAAGAAAGATATACCTGGAGACATTAGAACAGC
GATGGGAACCATTGCAACTCGGGTCCATCTTTGTAACATGCTGAAGACAAGCAGAAGCACATGC
ACGAGGGACAGAGGAGCTACTGTGCACTGCTGTGAAATTGCCCAGATCATAAAACCTGTGTACC
CTCCTTCACATCAACCAAGTTCACTAGGACATACCAAGCACATGTGTGTGAATGAGGATGCAAG
GCAAGAGAACGGAACTCCAGAATTCACAGATAGAACAAATGGATGAGAAATATTTCATGCAAAA
TATAAAGTGTCCTGAGGATCTGGGTTCCATTTACGAGAGGAAATGAAAGTGCTAAAATAAATTT
TATCTTCCTTTTAAATGTCAGCATGTCAGCAGAAGCAGCACACAAAAGTCTTTACCATTTTCCA
GTATTAATTTTTTGTAATATAAATGATAAAGGAGATGATAAAGAACCAATAGATTATTGATAAA
TAAATTAGTAATAATATGATTTTTTGTTTCTATGAGTTCTAAACAGCCCTATACAGTATTCAGT
TTCCATGAGAAATATTTATTGTATCAAAGTACATTGTACTTAACATTTTAGGCCATCCTTTTAC
TGTTCCTTGATGCTTTAATATATATTAATTTATAATTATCCTGATATTTTTGTACATTTTTCAA
ACTTAAAAATCAGGATTTTTTTTTTTTTTTTTTTTTGGTCAATAGTACTAACATAGGGTTTTAT
CTTGGGATAAATATGTGTTGGTCTGTTTGTTGACCTTGACATCTGATCACTGATGTCAATGACC
TACTGGCCTCATTCAGGACACCTGCAGAGAGTATGCAAAGTCCGAGAGAGGAAAACAGAAATCT
GTATGTGAGATGGTCATTGTACAGAAAGAAGTGGCCCCTCTGCAACATGTCCTCACAGAAACGA
AATGGTGTGTAGCAATCAACACTAGAAAGTAGACCTTTTGCAAATTAATATGTCCTTGACCTTT
TTTGCCCTTTTCTGCCCTTTTCTGGGGGTGGGGTGGGGATAAAAAGACTGTCATATCAAGAACT
GTGACTTTTCTTTCCCTCGAACAATAAAACTCCTTTATTATCTTAATGCTCCCATGTTAACATG
TTTGCTGCTAAATTACAATGTAGAATTGATAATGATTTATAGTGAACCGTGCTCTTCCCTCATT
AAAATCCCAGGGTGCCCTGTAAAGATGCAGATGTTTCTTCCTGAAAACTTCTTTTTTTACAAAG
AAAATTAGATGTACATGTATAATTCAGTGTGCTTTGTCTTTCTCCAGATTAATATCGGTTACAC
TGCTGATGTTTGTAAATTAAACAGATATTTACTTCA

hide sequence

RefSeq Acc Id:

XM_063603740 ⟹ XP_063459810

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	3	20,490,764 - 20,869,771 (+)	NCBI

RefSeq Acc Id:

XM_063603741 ⟹ XP_063459811

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	3	20,490,765 - 20,869,771 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_003826867	(Get FASTA)	NCBI Sequence Viewer
	XP_003826869	(Get FASTA)	NCBI Sequence Viewer
	XP_063459810	(Get FASTA)	NCBI Sequence Viewer
	XP_063459811	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSPPAP00000042522.1
	ENSPPAP00000042524.1
	ENSPPAP00000042525.1
	ENSPPAP00000042526.1
	ENSPPAP00000042527.1

RefSeq Acc Id:	XP_003826867 ⟸ XM_003826819
- Peptide Label:	isoform X1
- UniProtKB:	A0A2R9CKM7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MRGVGWQMLSLSLGLVLAILNKVAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNG NNITRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTAK LYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLSV ASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPSHLRGHNVAEVQKREFV CSGHQSFMAPSCSVLHCPAACTCSNNIVDCRGKGLTEIPTNLPETITEIRLEQNTIKVIPPGAF SPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKI NCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHLKWLADYLHTN PIETSGARCTSPRRLANKRIGQIKSKKFRCSAKEQYFIPGTEDYRSKLSGDCFADLACPEKCRC EGTTVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEG AFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDN QITTVAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPYFLKEIPIQD VAIQDFTCDDGNDDNSCSPLSRCPTECTCLDTVVRCSNKGLKVLPKGIPRDVTELYLDGNQFML VPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSL HGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSDWVKSEYKEPGIARCAGPGEMADKL LLTTPSKKFTCQGPVDVNILAKCNPCLSNPCKNDGTCNSDPVDFYRCTCPYGFKGQDCDVPIHA CISNPCKHGGTCHLKEGEEDGFWCICADGFEGENCEVNVDDCEDNDCENNSTCVDGINNYTCLC PPEYTGELCEEKLDFCAQDLNPCQHDSKCILTPKGFKCDCTPGYVGEHCDIDFDDCQDNKCKNG AHCTDAVNGYTCICPEGYSGLFCEFSPPMVLPRTSPCDNFDCQNGAQCIVRINEPICQCLPGYQ GEKCEKLVSVNFINKESYLQIPSAKVRPQTNITLQIATDEDSGILLYKGDKDHIAVELYRGRVR ASYDTGSHPASAIYSVETINDGNFHIVELLALDQSLSLSVDGGNPKIITNLSKQSTLNFDSPLY VGGMPGKSNVASLRQAPGQNGTSFHGCIRNLYINSELQDFQKVPMQTGILPGCEPCHKKVCAHG TCQPSSQAGFTCECQEGWMGPLCDQRTNDPCLGNKCVHGTCLPINAFSYSCKCLEGHGGVLCDE EEDLFNPCQAIKCKHGKCRLSGLGQPYCECSSGYTGDSCDREISCRGERIRDYYQKQQGYAACQ TTKKVSRLECRGGCAGGQCCGPLRSKRRKYSFECTDGSSFVDEVEKVVKCGCTRCVS hide sequence

RefSeq Acc Id:	XP_003826869 ⟸ XM_003826821
- Peptide Label:	isoform X2
- UniProtKB:	A0A2R9CKK9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MRGVGWQMLSLSLGLVLAILNKVAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNG NNITRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTAK LYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLSV ASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPSHLRGHNVAEVQKREFV CSGHQSFMAPSCSVLHCPAACTCSNNIVDCRGKGLTEIPTNLPETITEIRLEQNTIKVIPPGAF SPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKI NCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHLKWLADYLHTN PIETSGARCTSPRRLANKRIGQIKSKKFRCSGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCS NQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGV NEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPG AFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQDFTC DDGNDDNSCSPLSRCPTECTCLDTVVRCSNKGLKVLPKGIPRDVTELYLDGNQFMLVPKELSNY KHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVV PEGAFNDLSALSHLAIGANPLYCDCNMQWLSDWVKSEYKEPGIARCAGPGEMADKLLLTTPSKK FTCQGPVDVNILAKCNPCLSNPCKNDGTCNSDPVDFYRCTCPYGFKGQDCDVPIHACISNPCKH GGTCHLKEGEEDGFWCICADGFEGENCEVNVDDCEDNDCENNSTCVDGINNYTCLCPPEYTGEL CEEKLDFCAQDLNPCQHDSKCILTPKGFKCDCTPGYVGEHCDIDFDDCQDNKCKNGAHCTDAVN GYTCICPEGYSGLFCEFSPPMVLPRTSPCDNFDCQNGAQCIVRINEPICQCLPGYQGEKCEKLV SVNFINKESYLQIPSAKVRPQTNITLQIATDEDSGILLYKGDKDHIAVELYRGRVRASYDTGSH PASAIYSVETINDGNFHIVELLALDQSLSLSVDGGNPKIITNLSKQSTLNFDSPLYVGGMPGKS NVASLRQAPGQNGTSFHGCIRNLYINSELQDFQKVPMQTGILPGCEPCHKKVCAHGTCQPSSQA GFTCECQEGWMGPLCDQRTNDPCLGNKCVHGTCLPINAFSYSCKCLEGHGGVLCDEEEDLFNPC QAIKCKHGKCRLSGLGQPYCECSSGYTGDSCDREISCRGERIRDYYQKQQGYAACQTTKKVSRL ECRGGCAGGQCCGPLRSKRRKYSFECTDGSSFVDEVEKVVKCGCTRCVS hide sequence

Ensembl Acc Id:

ENSPPAP00000042524 ⟸ ENSPPAT00000065454

Ensembl Acc Id:

ENSPPAP00000042522 ⟸ ENSPPAT00000065452

Ensembl Acc Id:

ENSPPAP00000042527 ⟸ ENSPPAT00000065457

Ensembl Acc Id:

ENSPPAP00000042526 ⟸ ENSPPAT00000065456

Ensembl Acc Id:

ENSPPAP00000042525 ⟸ ENSPPAT00000065455

RefSeq Acc Id:	XP_063459810 ⟸ XM_063603740
- Peptide Label:	isoform X3
- UniProtKB:	A0A2R9CKM7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063459811 ⟸ XM_063603741
- Peptide Label:	isoform X4
- UniProtKB:	A0A2R9CKK9 (UniProtKB/TrEMBL)

Protein Domains

CTCK EGF-like Laminin G

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSPPAG00000043820	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSPPAT00000065452.1	UniProtKB/TrEMBL
	ENSPPAT00000065454.1	UniProtKB/TrEMBL
	ENSPPAT00000065455.1	UniProtKB/TrEMBL
	ENSPPAT00000065456.1	UniProtKB/TrEMBL
	ENSPPAT00000065457.1	UniProtKB/TrEMBL
Gene3D-CATH	2.60.120.200	UniProtKB/TrEMBL
	3.80.10.10	UniProtKB/TrEMBL
	Laminin	UniProtKB/TrEMBL
InterPro	ConA-like_dom_sf	UniProtKB/TrEMBL
	Cys-rich_flank_reg_C	UniProtKB/TrEMBL
	Cys_knot_C	UniProtKB/TrEMBL
	EGF-like_Ca-bd_dom	UniProtKB/TrEMBL
	EGF-like_CS	UniProtKB/TrEMBL
	EGF-like_dom	UniProtKB/TrEMBL
	EGF-type_Asp/Asn_hydroxyl_site	UniProtKB/TrEMBL
	EGF_Ca-bd_CS	UniProtKB/TrEMBL
	Fol_N	UniProtKB/TrEMBL
	Laminin_G	UniProtKB/TrEMBL
	Leu-rich_rpt	UniProtKB/TrEMBL
	Leu-rich_rpt_typical-subtyp	UniProtKB/TrEMBL
	LRR_dom_sf	UniProtKB/TrEMBL
	LRRNT	UniProtKB/TrEMBL
	Notch/Slit_guidance	UniProtKB/TrEMBL
NCBI Gene	SLIT2	ENTREZGENE
PANTHER	SLIT HOMOLOG	UniProtKB/TrEMBL
	SLIT HOMOLOG 2 PROTEIN	UniProtKB/TrEMBL
Pfam	EGF	UniProtKB/TrEMBL
	hEGF	UniProtKB/TrEMBL
	Laminin_G_1	UniProtKB/TrEMBL
	LRR_1	UniProtKB/TrEMBL
	LRR_8	UniProtKB/TrEMBL
	LRRCT	UniProtKB/TrEMBL
	LRRNT	UniProtKB/TrEMBL
PROSITE	ASX_HYDROXYL	UniProtKB/TrEMBL
	CTCK_1	UniProtKB/TrEMBL
	CTCK_2	UniProtKB/TrEMBL
	EGF_1	UniProtKB/TrEMBL
	EGF_2	UniProtKB/TrEMBL
	EGF_3	UniProtKB/TrEMBL
	EGF_CA	UniProtKB/TrEMBL
	LAM_G_DOMAIN	UniProtKB/TrEMBL
	LRR	UniProtKB/TrEMBL
SMART	EGF	UniProtKB/TrEMBL
	EGF_CA	UniProtKB/TrEMBL
	FOLN	UniProtKB/TrEMBL
	LamG	UniProtKB/TrEMBL
	LRR_SD22	UniProtKB/TrEMBL
	LRR_TYP	UniProtKB/TrEMBL
	LRRCT	UniProtKB/TrEMBL
	LRRNT	UniProtKB/TrEMBL
	SM00041	UniProtKB/TrEMBL
Superfamily-SCOP	EGF/Laminin	UniProtKB/TrEMBL
	L domain-like	UniProtKB/TrEMBL
	SSF49899	UniProtKB/TrEMBL
UniProt	A0A2R9CKK9	ENTREZGENE, UniProtKB/TrEMBL
	A0A2R9CKM7	ENTREZGENE, UniProtKB/TrEMBL
	A0A2R9CKN8_PANPA	UniProtKB/TrEMBL
	A0A2R9CSR8_PANPA	UniProtKB/TrEMBL
	A0A2R9CSS0_PANPA	UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - MGI

Imported Annotations - PID (archival)

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - MGI

Imported Annotations - PID (archival)