PNP (purine nucleoside phosphorylase) - Rat Genome Database

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Gene: PNP (purine nucleoside phosphorylase) Pan paniscus
Analyze
Symbol: PNP
Name: purine nucleoside phosphorylase
RGD ID: 11746896
Description: ENCODES a protein that exhibits identical protein binding (ortholog); nucleoside binding (ortholog); phosphate ion binding (ortholog); INVOLVED IN allantoin metabolic process (ortholog); dAMP catabolic process (ortholog); deoxyadenosine catabolic process (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH Arsenic Poisoning (ortholog); Chemical and Drug Induced Liver Injury (ortholog); COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); extracellular region (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11419,396,114 - 19,403,907 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1419,396,114 - 19,403,907 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0141,343,921 - 1,351,670 (+)NCBIMhudiblu_PPA_v0panPan3
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Comparative Map Data
PNP
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11419,396,114 - 19,403,907 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1419,396,114 - 19,403,907 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0141,343,921 - 1,351,670 (+)NCBIMhudiblu_PPA_v0panPan3
PNP
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1420,468,954 - 20,477,089 (+)EnsemblGRCh38hg38GRCh38
GRCh381420,469,406 - 20,477,089 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh371420,937,565 - 20,945,248 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361420,007,382 - 20,015,088 (+)NCBINCBI36hg18NCBI36
Build 341420,007,404 - 20,015,039NCBI
Celera14798,688 - 807,315 (+)NCBI
Cytogenetic Map14q11.2NCBI
HuRef141,059,149 - 1,067,777 (+)NCBIHuRef
CHM1_11420,938,918 - 20,947,545 (+)NCBICHM1_1
Pnp2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391451,193,598 - 51,202,206 (+)NCBIGRCm39mm39
GRCm39 Ensembl1451,193,449 - 51,202,206 (+)Ensembl
GRCm381450,956,141 - 50,964,751 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1450,955,992 - 50,964,749 (+)EnsemblGRCm38mm10GRCm38
MGSCv371451,575,816 - 51,584,424 (+)NCBIGRCm37mm9NCBIm37
MGSCv361449,877,941 - 49,888,626 (+)NCBImm8
Cytogenetic Map14C1NCBI
Pnp
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21524,170,456 - 24,178,274 (+)NCBImRatBN7.2
mRatBN7.2 Ensembl1524,170,602 - 24,203,986 (+)Ensembl
Rnor_6.01527,875,883 - 27,883,566 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1527,875,911 - 27,883,350 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01531,708,604 - 31,716,285 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41526,929,784 - 26,937,434 (+)NCBIRGSC3.4rn4RGSC3.4
Celera1524,490,737 - 24,498,388 (+)NCBICelera
Cytogenetic Map15p14NCBI
Pnp
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555501,290,244 - 1,298,068 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555501,290,816 - 1,299,553 (+)NCBIChiLan1.0ChiLan1.0
PNP
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11517,808,454 - 17,815,987 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1517,808,461 - 17,815,676 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1518,291,391 - 18,298,968 (+)NCBI
ROS_Cfam_1.01518,065,565 - 18,073,165 (+)NCBI
UMICH_Zoey_3.11517,748,318 - 17,755,891 (+)NCBI
UNSW_CanFamBas_1.01517,802,993 - 17,810,552 (+)NCBI
UU_Cfam_GSD_1.01517,932,170 - 17,939,749 (+)NCBI
LOC101970144
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440864077,705,514 - 77,711,679 (+)NCBI
SpeTri2.0NW_004936877686,539 - 692,832 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PNP
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl778,424,740 - 78,446,997 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1778,426,838 - 78,447,029 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2783,454,669 - 83,474,828 (-)NCBISscrofa10.2Sscrofa10.2susScr3
Pig Cytomap7q21-qterNCBI
LOC103231345
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12920,992,892 - 21,001,400 (+)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl2920,993,280 - 21,001,606 (+)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366605925,428,857 - 25,437,006 (-)NCBIVero_WHO_p1.0
Pnp
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248254,688,662 - 4,699,912 (-)NCBIHetGla_female_1.0hetGla2


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_008964116 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide SSBP01000355 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSPPAT00000021361   ⟹   ENSPPAP00000004665
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1419,396,114 - 19,403,907 (+)Ensembl
RefSeq Acc Id: XM_008964116   ⟹   XP_008962364
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.11419,396,114 - 19,403,907 (+)NCBI
Mhudiblu_PPA_v0141,343,921 - 1,351,670 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_008962364 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_008962364   ⟸   XM_008964116
- Sequence:
RefSeq Acc Id: ENSPPAP00000004665   ⟸   ENSPPAT00000021361


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000019487 Ensembl, ENTREZGENE
Ensembl Protein ENSPPAP00000004665 ENTREZGENE
NCBI Gene PNP ENTREZGENE