ACTN1 (actinin alpha 1) - Rat Genome Database

Name: ACTN1
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: ACTN1 (actinin alpha 1) Pan paniscus

Analyze

Symbol:

ACTN1

Name:

actinin alpha 1

RGD ID:

11744247

Description:

ENCODES a protein that exhibits cytoskeletal regulatory protein binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN platelet activation (ortholog); platelet aggregation (ortholog); PARTICIPATES IN E-cadherin signaling pathway; syndecan signaling pathway; ASSOCIATED WITH Diabetic Nephropathies (ortholog); Experimental Liver Cirrhosis (ortholog); genetic disease (ortholog); FOUND IN cytoskeleton (ortholog); dendritic spine (ortholog); glutamatergic synapse (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

alpha-actinin-1

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	ACTN1 (actinin alpha 1)	NCBI	Ortholog
Mus musculus (house mouse):	Actn1 (actinin, alpha 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Actn1 (actinin, alpha 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Actn1 (actinin alpha 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	ACTN1 (actinin alpha 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Actn1 (actinin alpha 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	ACTN1 (actinin alpha 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	ACTN1 (actinin alpha 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Actn1 (actinin alpha 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly

Position:

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	15	69,990,975 - 70,096,691 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	14	69,207,296 - 69,313,200 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	14	49,460,390 - 49,565,986 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	14	68,335,694 - 68,440,836 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	14	68,335,694 - 68,440,836 (-)	Ensembl	panpan1.1		panPan2

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Diabetic Nephropathies (ISO)

Experimental Liver Cirrhosis (ISO)

genetic disease (ISO)

hemorrhagic disease (ISO)

platelet-type bleeding disorder 15 (ISO)

thrombocytopenia (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

actin cytoskeleton organization (IEA)

actin filament bundle assembly (IEA)

actin filament network formation (IEA)

actin filament organization (IEA)

focal adhesion assembly (IEA)

muscle cell development (IEA)

platelet activation (ISO)

platelet aggregation (ISO)

platelet formation (IEA)

platelet morphogenesis (IEA)

positive regulation of DNA-templated transcription (IEA)

postsynapse organization (IEA)

Cellular Component

actin cytoskeleton (IEA)

actin filament (IEA)

anchoring junction (IEA)

brush border (IEA)

cell junction (IEA)

cell projection (IEA)

cell-cell junction (IEA)

cortical actin cytoskeleton (IEA)

cytoplasm (IEA)

cytoskeleton (ISO)

dendritic spine (ISO)

fascia adherens (IEA)

focal adhesion (IEA)

glutamatergic synapse (IEA,ISO)

membrane (IEA)

plasma membrane (IEA)

ruffle (IEA)

sarcomere (IEA)

stress fiber (IEA)

Z disc (IEA)

Molecular Function

actin binding (IEA)

actin filament binding (IEA)

calcium ion binding (IEA)

cytoskeletal protein binding (IEA)

cytoskeletal regulatory protein binding (ISO)

double-stranded RNA binding (IEA)

integrin binding (IEA)

metal ion binding (IEA)

nuclear receptor coactivator activity (IEA)

protein binding (ISO)

protein domain specific binding (ISO)

protein homodimerization activity (IEA)

structural constituent of postsynapse (IEA)

transmembrane transporter binding (IEA)

vinculin binding (IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

E-cadherin signaling pathway (ISO)

syndecan signaling pathway (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

ACTN1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	15	69,990,975 - 70,096,691 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	14	69,207,296 - 69,313,200 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	14	49,460,390 - 49,565,986 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	14	68,335,694 - 68,440,836 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	14	68,335,694 - 68,440,836 (-)	Ensembl	panpan1.1		panPan2

ACTN1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	14	68,874,128 - 68,979,302 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	14	68,874,128 - 68,979,440 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	14	69,340,845 - 69,446,019 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	14	68,410,793 - 68,515,709 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	14	68,410,792 - 68,515,709	NCBI
Celera	14	49,401,716 - 49,506,993 (-)	NCBI		Celera
Cytogenetic Map	14	q24.1	NCBI
HuRef	14	49,510,917 - 49,616,121 (-)	NCBI		HuRef
CHM1_1	14	69,279,215 - 69,384,488 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	14	63,083,135 - 63,188,360 (-)	NCBI		T2T-CHM13v2.0

Actn1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	12	80,214,316 - 80,307,165 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	12	80,214,321 - 80,307,145 (-)	Ensembl		GRCm39 Ensembl
GRCm38	12	80,167,542 - 80,260,420 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	12	80,167,547 - 80,260,371 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	12	81,268,529 - 81,361,358 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	12	81,086,387 - 81,179,156 (-)	NCBI		MGSCv36	mm8
Celera	12	81,632,311 - 81,725,181 (-)	NCBI		Celera
Cytogenetic Map	12	C3	NCBI
cM Map	12	36.49	NCBI

Actn1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	6	104,731,485 - 104,826,312 (-)	NCBI		GRCr8
mRatBN7.2	6	98,998,553 - 99,093,334 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	6	98,998,556 - 99,093,251 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	6	99,420,854 - 99,515,776 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	6	99,719,945 - 99,814,871 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	6	99,099,910 - 99,194,634 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	6	103,376,557 - 103,470,497 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	6	103,375,799 - 103,470,555 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	6	116,056,248 - 116,149,471 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	6	103,188,593 - 103,282,873 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	6	103,192,048 - 103,286,329	NCBI
Celera	6	97,355,796 - 97,450,012 (-)	NCBI		Celera
Cytogenetic Map	6	q24	NCBI

Actn1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955466	1,388,507 - 1,480,282 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955466	1,388,507 - 1,480,990 (+)	NCBI	ChiLan1.0	ChiLan1.0

ACTN1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	8	42,714,806 - 42,808,318 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	8	42,712,142 - 42,808,323 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	8	42,404,474 - 42,497,710 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	8	42,945,028 - 43,038,491 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	8	42,945,037 - 43,038,504 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	8	42,559,338 - 42,652,710 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	8	42,634,268 - 42,727,356 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	8	42,993,500 - 43,086,762 (-)	NCBI		UU_Cfam_GSD_1.0

Actn1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	61,974,520 - 62,067,210 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936495	12,124,443 - 12,217,242 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936495	12,124,489 - 12,217,223 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ACTN1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	7	92,550,007 - 92,644,842 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	7	92,550,132 - 92,644,842 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	7	98,863,871 - 98,874,025 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ACTN1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	24	46,089,989 - 46,196,897 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	24	46,085,751 - 46,196,886 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666053	34,323,625 - 34,430,616 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Actn1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624734	32,097,671 - 32,192,729 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624734	32,097,364 - 32,190,162 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_003824085	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_003824086	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_003824087	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008977801	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034937714	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_055097732	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_055097733	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063596262	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JARIFH020000015	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSPPAT00000051212 ⟹ ENSPPAP00000028365

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	14	68,335,694 - 68,440,836 (-)	Ensembl

RefSeq Acc Id:

ENSPPAT00000051217 ⟹ ENSPPAP00000028370

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	14	68,335,694 - 68,440,565 (-)	Ensembl

RefSeq Acc Id:

ENSPPAT00000051222 ⟹ ENSPPAP00000028375

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	14	68,335,697 - 68,440,565 (-)	Ensembl

RefSeq Acc Id:

XM_003824085 ⟹ XP_003824133

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	15	69,990,975 - 70,096,691 (-)	NCBI
NHGRI_mPanPan1	14	69,207,296 - 69,313,200 (-)	NCBI
Mhudiblu_PPA_v0	14	49,460,390 - 49,565,982 (-)	NCBI
PanPan1.1	14	68,335,697 - 68,440,565 (-)	NCBI

Sequence:

show sequence

TCTGCCCCTTCCCCCCGCCCCCGCCCGCCTCGGCTCCCGCAGCGCTAGTGTGTCCGCCTAGCTC
AGTGTGCGTGGAGATTAGGTCCAAGCGCCCGCCCAGAGGCAGGCAGTCCGCGAGCCCAGCCGCC
GCTGTCGCCGCCAGTAGCAGCCTTCGCCAGCAGCGCCGCGGCGGAACCGGGCGCAGGGGAGCGA
GCCCGGCCCCGCCAGCCCAGCCCAGCCCAGCCCTACTCCCTCCCCACGCCAGGGCAGCAGCCGT
TGCTCAGAGAGAAGGTGGAGGAAGAAATCCAGACCCTAGCACGCGCGCACCATCATGGACCATT
ATGATTCTCAGCAAACCAACGATTACATGCAGCCAGAAGAGGACTGGGACCGGGACCTGCTCCT
GGACCCGGCCTGGGAGAAGCAGCAGAGAAAGACATTCACGGCATGGTGTAACTCCCACCTCCGG
AAGGCGGGGACACAGATCGAGAACATCGAAGAGGACTTCCGGGATGGCCTGAAGCTCATGCTGC
TGCTGGAGGTCATCTCAGGTGAACGCTTGGCCAAGCCAGAGCGAGGCAAGATGAGAGTGCACAA
GATCTCCAACGTCAACAAGGCCCTGGATTTCATAGCCAGCAAAGGCGTCAAACTGGTGTCCATC
GGAGCCGAAGAAATCGTGGATGGGAATGTGAAGATGACCCTGGGCATGATCTGGACCATCATCC
TGCGCTTTGCCATCCAGGACATCTCCGTGGAAGAGACTTCAGCCAAGGAAGGGCTGCTCCTGTG
GTGTCAGAGAAAGACAGCCCCTTACAAAAATGTCAACATCCAGAACTTCCACATAAGCTGGAAG
GATGGCCTCGGCTTCTGTGCCTTGATCCACCGACACCGGCCCGAGCTGATTGACTACGGGAAGC
TGCGGAAGGATGATCCACTCACAAATCTGAATACGGCTTTTGACGTGGCAGAGAAGTACCTGGA
CATCCCCAAGATGCTGGATGCCGAAGACATCGTTGGAACTGCCCGACCGGATGAGAAAGCCATC
ATGACTTACGTGTCTAGCTTCTACCACGCCTTCTCTGGAGCCCAGAAGGCGGAGACAGCAGCCA
ATCGCATCTGCAAGGTGTTGGCCGTCAACCAGGAGAACGAGCAGCTTATGGAAGACTACGAGAA
GCTGGCCAGTGATCTGTTGGAGTGGATCCGCCGCACAATCCCGTGGCTGGAGAACCGGGTGCCC
GAGAACACCATGCATGCCATGCAACAGAAGCTGGAGGACTTCCGGGACTACCGGCGCCTGCACA
AGCCGCCCAAGGTGCAGGAGAAGTGCCAGCTGGAGATCAACTTCAACACGCTGCAGACCAAGCT
GCGGCTCAGCAACCGGCCTGCCTTCATGCCCTCTGAGGGCAGGATGGTCTCGGACATCAACAAT
GCCTGGGGCTGCCTAGAGCAGGTGGAGAAGGGCTATGAGGAGTGGTTGCTGAATGAGATCCGGA
GGCTGGAGCGACTGGACCACCTGGCAGAGAAGTTCCGGCAGAAGGCCTCCATCCACGAGGCCTG
GACTGATGGCAAAGAGGCCATGCTGCGACAGAAGGACTATGAGACCGCCACCCTCTCTGAGATC
AAGGCCCTGCTCAAGAAGCATGAGGCCTTCGAGAGTGACCTGGCTGCCCACCAGGACCGTGTGG
AGCAGATTGCCGCCATCGCACAGGAGCTCAATGAGCTGGACTATTATGACTCACCCAGTGTCAA
CGCCCGTTGCCAAAAGATCTGTGACCAGTGGGACAATCTGGGGGCCCTAACTCAGAAGCGAAGG
GAAGCTCTGGAGCGGACCGAGAAACTGCTGGAGACCATTGACCAGCTGTACTTGGAGTATGCCA
AGCGGGCTGCACCCTTCAACAACTGGATGGAGGGGGCCATGGAGGACCTGCAGGACACCTTCAT
TGTGCACACCATTGAGGAGATCCAGGGACTGACCACAGCCCATGAGCAGTTCAAGGCCACCCTC
CCTGATGCTGACAAGGAGCGCCTGGCCATCCTGGGCATCCACAATGAGGTGTCCAAGATTGTCC
AGACCTACCACGTCAATATGGCGGGCACCAACCCCTACACAACCATCACGCCTCAGGAGATCAA
TGGCAAATGGGACCACGTGCGGCAGCTGGTGCCTCGGAGGGACCAAGCTCTGACGGAGGAGCAT
GCCCGACAGCAGCACAATGAGAGGCTACGCAAGCAGTTTGGAGCCCAGGCCAATGTCATCGGGC
CCTGGATCCAGACCAAGATGGAGGAGATCGGGAGGATCTCCATTGAGATGCATGGGACCCTGGA
GGACCAGCTCAGCCACCTGCGGCAGTATGAGAAGAGCATCGTCAACTACAAGCCAAAGATTGAC
CAGCTGGAGGGCGACCACCAGCTCATCCAGGAGGCGCTCATCTTCGACAACAAGCACACCAACT
ACACCATGGAGCACATCCGTGTGGGCTGGGAGCAGCTGCTCACCACCATCGCCAGGACCATCAA
TGAGGTAGAGAACCAGATCCTGACCCGGGATGCCAAGGGCATCAGCCAGGAGCAGATGAATGAG
TTCCGGGCCTCCTTCAACCACTTTGACCGGGATCACTCCGGCACACTGGGTCCCGAGGAGTTCA
AAGCCTGCCTCATCAGCTTGGGTTATGATATTGGCAACGACCCCCAGGGAGAAGCAGAATTTGC
CCGCATCATGAGCATTGTGGACCCCAACCGCCTGGGGGTAGTGACATTCCAGGCCTTCATTGAC
TTCATGTCCCGCGAGACAGCCGACACAGATACAGCAGACCAAGTCATGGCTTCCTTCAAGATCC
TGGCCGGGGACAAGAACTATATTACCATGGACGAACTGCGCCGCGAGCTGCCGCCCGACCAGGC
TGAGTACTGCATCGCGCGGATGGCCCCCTACACCGGCCCCGACTCCGTGCCAGGTGCTCTGGAC
TACATGTCCTTCTCCACGGCGCTGTACGGCGAGAGTGACCTCTAATCCACCCCGCCCGGCCGCC
CTCGTCTTGTGCGCCGTGCCCTGCCTTGCACCTCTGCCGTCGCCCATCTCCTGCCTGGGTTCGG
TTTCAGCTCCCAGCCTCCACCCGGGTGAGCTGGGGCCCACGTGGCATCGATCCTCCCTGCCCGC
GAAGTGACAGTTTACAAAATTATTTTCTGCAAAAAAGAAAAAAAGTTACGTTAAAAACCAAAAA
ACTACATATTTTATTATAGAAAAAGTATTTTTTTCTCCACCAGACAAATGGAAAAAAAGAGGAA
AGATTAACTATTTGCACCGAAATGTCTTGTTTTGTTGCGACATAGGAAAATAACCAAGCACAAA
GTTATATTCCATCCTTTTTACTGATTTTTTTTCTTCTATCTGTTCCATCTGCTGTATTCATTTC
TCCAATCTCATGTCCACTTTGGTGTGGGAGTCGGGGTAGGGGGTACTCTTGTCAAAAGGCACAT
TGGTGCATGTGTGTTTGCTAGCTCACTTGTCCATGAAAATATTTTATGATATTAAAGAAAATCT
TTTGAAATGGCTGTTTTTTAAGGAAGAGAATTTATGTGGCTTCTCATTTTTAAATCCCCTCAGA
GGTGTGACTAGTCTCTTTATCAGCACACACTTAAAAAATTTTTAATATTGTCTATTAAAAATAG
GACAAACTTGGAGAGTATGGACAGCTTTGATATTGCTTGGCACAGATGGTATTAAAACAACCAC
ACTCCTA

hide sequence

RefSeq Acc Id:

XM_003824086 ⟹ XP_003824134

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	15	69,990,975 - 70,096,582 (-)	NCBI
NHGRI_mPanPan1	14	69,207,296 - 69,312,921 (-)	NCBI
Mhudiblu_PPA_v0	14	49,460,569 - 49,565,959 (-)	NCBI
PanPan1.1	14	68,335,694 - 68,440,565 (-)	NCBI

Sequence:

show sequence

TCTGCCCCTTCCCCCCGCCCCCGCCCGCCTCGGCTCCCGCAGCGCTAGTGTGTCCGCCTAGCTC
AGTGTGCGTGGAGATTAGGTCCAAGCGCCCGCCCAGAGGCAGGCAGTCCGCGAGCCCAGCCGCC
GCTGTCGCCGCCAGTAGCAGCCTTCGCCAGCAGCGCCGCGGCGGAACCGGGCGCAGGGGAGCGA
GCCCGGCCCCGCCAGCCCAGCCCAGCCCAGCCCTACTCCCTCCCCACGCCAGGGCAGCAGCCGT
TGCTCAGAGAGAAGGTGGAGGAAGAAATCCAGACCCTAGCACGCGCGCACCATCATGGACCATT
ATGATTCTCAGCAAACCAACGATTACATGCAGCCAGAAGAGGACTGGGACCGGGACCTGCTCCT
GGACCCGGCCTGGGAGAAGCAGCAGAGAAAGACATTCACGGCATGGTGTAACTCCCACCTCCGG
AAGGCGGGGACACAGATCGAGAACATCGAAGAGGACTTCCGGGATGGCCTGAAGCTCATGCTGC
TGCTGGAGGTCATCTCAGGTGAACGCTTGGCCAAGCCAGAGCGAGGCAAGATGAGAGTGCACAA
GATCTCCAACGTCAACAAGGCCCTGGATTTCATAGCCAGCAAAGGCGTCAAACTGGTGTCCATC
GGAGCCGAAGAAATCGTGGATGGGAATGTGAAGATGACCCTGGGCATGATCTGGACCATCATCC
TGCGCTTTGCCATCCAGGACATCTCCGTGGAAGAGACTTCAGCCAAGGAAGGGCTGCTCCTGTG
GTGTCAGAGAAAGACAGCCCCTTACAAAAATGTCAACATCCAGAACTTCCACATAAGCTGGAAG
GATGGCCTCGGCTTCTGTGCCTTGATCCACCGACACCGGCCCGAGCTGATTGACTACGGGAAGC
TGCGGAAGGATGATCCACTCACAAATCTGAATACGGCTTTTGACGTGGCAGAGAAGTACCTGGA
CATCCCCAAGATGCTGGATGCCGAAGACATCGTTGGAACTGCCCGACCGGATGAGAAAGCCATC
ATGACTTACGTGTCTAGCTTCTACCACGCCTTCTCTGGAGCCCAGAAGGCGGAGACAGCAGCCA
ATCGCATCTGCAAGGTGTTGGCCGTCAACCAGGAGAACGAGCAGCTTATGGAAGACTACGAGAA
GCTGGCCAGTGATCTGTTGGAGTGGATCCGCCGCACAATCCCGTGGCTGGAGAACCGGGTGCCC
GAGAACACCATGCATGCCATGCAACAGAAGCTGGAGGACTTCCGGGACTACCGGCGCCTGCACA
AGCCGCCCAAGGTGCAGGAGAAGTGCCAGCTGGAGATCAACTTCAACACGCTGCAGACCAAGCT
GCGGCTCAGCAACCGGCCTGCCTTCATGCCCTCTGAGGGCAGGATGGTCTCGGACATCAACAAT
GCCTGGGGCTGCCTAGAGCAGGTGGAGAAGGGCTATGAGGAGTGGTTGCTGAATGAGATCCGGA
GGCTGGAGCGACTGGACCACCTGGCAGAGAAGTTCCGGCAGAAGGCCTCCATCCACGAGGCCTG
GACTGATGGCAAAGAGGCCATGCTGCGACAGAAGGACTATGAGACCGCCACCCTCTCTGAGATC
AAGGCCCTGCTCAAGAAGCATGAGGCCTTCGAGAGTGACCTGGCTGCCCACCAGGACCGTGTGG
AGCAGATTGCCGCCATCGCACAGGAGCTCAATGAGCTGGACTATTATGACTCACCCAGTGTCAA
CGCCCGTTGCCAAAAGATCTGTGACCAGTGGGACAATCTGGGGGCCCTAACTCAGAAGCGAAGG
GAAGCTCTGGAGCGGACCGAGAAACTGCTGGAGACCATTGACCAGCTGTACTTGGAGTATGCCA
AGCGGGCTGCACCCTTCAACAACTGGATGGAGGGGGCCATGGAGGACCTGCAGGACACCTTCAT
TGTGCACACCATTGAGGAGATCCAGGGACTGACCACAGCCCATGAGCAGTTCAAGGCCACCCTC
CCTGATGCTGACAAGGAGCGCCTGGCCATCCTGGGCATCCACAATGAGGTGTCCAAGATTGTCC
AGACCTACCACGTCAATATGGCGGGCACCAACCCCTACACAACCATCACGCCTCAGGAGATCAA
TGGCAAATGGGACCACGTGCGGCAGCTGGTGCCTCGGAGGGACCAAGCTCTGACGGAGGAGCAT
GCCCGACAGCAGCACAATGAGAGGCTACGCAAGCAGTTTGGAGCCCAGGCCAATGTCATCGGGC
CCTGGATCCAGACCAAGATGGAGGAGATCGGGAGGATCTCCATTGAGATGCATGGGACCCTGGA
GGACCAGCTCAGCCACCTGCGGCAGTATGAGAAGAGCATCGTCAACTACAAGCCAAAGATTGAC
CAGCTGGAGGGCGACCACCAGCTCATCCAGGAGGCGCTCATCTTCGACAACAAGCACACCAACT
ACACCATGGAGCACATCCGTGTGGGCTGGGAGCAGCTGCTCACCACCATCGCCAGGACCATCAA
TGAGGTAGAGAACCAGATCCTGACCCGGGATGCCAAGGGCATCAGCCAGGAGCAGATGAATGAG
TTCCGGGCCTCCTTCAACCACTTTGACCGGAAGAAGACAGGCATGATGGACACGGATGATTTCC
GCGCCTGCCTGATCTCCATGGGTTACAACATGGGAGAAGCAGAATTTGCCCGCATCATGAGCAT
TGTGGACCCCAACCGCCTGGGGGTAGTGACATTCCAGGCCTTCATTGACTTCATGTCCCGCGAG
ACAGCCGACACAGATACAGCAGACCAAGTCATGGCTTCCTTCAAGATCCTGGCCGGGGACAAGA
ACTATATTACCATGGACGAACTGCGCCGCGAGCTGCCGCCCGACCAGGCTGAGTACTGCATCGC
GCGGATGGCCCCCTACACCGGCCCCGACTCCGTGCCAGGTGCTCTGGACTACATGTCCTTCTCC
ACGGCGCTGTACGGCGAGAGTGACCTCTAATCCACCCCGCCCGGCCGCCCTCGTCTTGTGCGCC
GTGCCCTGCCTTGCACCTCTGCCGTCGCCCATCTCCTGCCTGGGTTCGGTTTCAGCTCCCAGCC
TCCACCCGGGTGAGCTGGGGCCCACGTGGCATCGATCCTCCCTGCCCGCGAAGTGACAGTTTAC
AAAATTATTTTCTGCAAAAAAGAAAAAAAGTTACGTTAAAAACCAAAAAACTACATATTTTATT
ATAGAAAAAGTATTTTTTTCTCCACCAGACAAATGGAAAAAAAGAGGAAAGATTAACTATTTGC
ACCGAAATGTCTTGTTTTGTTGCGACATAGGAAAATAACCAAGCACAAAGTTATATTCCATCCT
TTTTACTGATTTTTTTTCTTCTATCTGTTCCATCTGCTGTATTCATTTCTCCAATCTCATGTCC
ACTTTGGTGTGGGAGTCGGGGTAGGGGGTACTCTTGTCAAAAGGCACATTGGTGCATGTGTGTT
TGCTAGCTCACTTGTCCATGAAAATATTTTATGATATTAAAGAAAATCTTTTGAAATGGCTGTT
TTTTAAGGAAGAGAATTTATGTGGCTTCTCATTTTTAAATCCCCTCAGAGGTGTGACTAGTCTC
TTTATCAGCACACACTTAAAAAATTTTTAATATTGTCTATTAAAAATAGGACAAACTTGGAGAG
TATGGACAGCTTTGATATTGCTTGGCACAGATGGTATTAAAACAACCACACTCCTATGA

hide sequence

RefSeq Acc Id:

XM_003824087 ⟹ XP_003824135

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	15	69,990,975 - 70,096,372 (-)	NCBI
NHGRI_mPanPan1	14	69,207,296 - 69,312,920 (-)	NCBI
Mhudiblu_PPA_v0	14	49,460,390 - 49,565,959 (-)	NCBI
PanPan1.1	14	68,335,694 - 68,440,836 (-)	NCBI

Sequence:

show sequence

CTCCTGGGGCTCCCAAGCGCGCTGCCACTCAGTCCCCGAGCTCGGGGAGGCGTCTCCCAGCTTC
GGTCCCGTTCAGCTTAAGCTGGCGTCACATGAGCCGCGGGGGAACGGGCACCGCGGGAGTGGGC
GGGGGTGTGCGCGCCGGGAGGGGGCCGCCCAGTCCACCTATATGCGCCGCAGCCCGGCTGACGG
ATGCCAGGAATTCCCAATGAGAGGCGATGGGGGGAAGTTTGGGCAACTCGGCCTGGCCAATGGA
GAGCCTCGGGAGGGCTCTGCCCCTTCCCCCCGCCCCCGCCCGCCTCGGCTCCCGCAGCGCTAGT
GTGTCCGCCTAGCTCAGTGTGCGTGGAGATTAGGTCCAAGCGCCCGCCCAGAGGCAGGCAGTCC
GCGAGCCCAGCCGCCGCTGTCGCCGCCAGTAGCAGCCTTCGCCAGCAGCGCCGCGGCGGAACCG
GGCGCAGGGGAGCGAGCCCGGCCCCGCCAGCCCAGCCCAGCCCAGCCCTACTCCCTCCCCACGC
CAGGGCAGCAGCCGTTGCTCAGAGAGAAGGTGGAGGAAGAAATCCAGACCCTAGCACGCGCGCA
CCATCATGGACCATTATGATTCTCAGCAAACCAACGATTACATGCAGCCAGAAGAGGACTGGGA
CCGGGACCTGCTCCTGGACCCGGCCTGGGAGAAGCAGCAGAGAAAGACATTCACGGCATGGTGT
AACTCCCACCTCCGGAAGGCGGGGACACAGATCGAGAACATCGAAGAGGACTTCCGGGATGGCC
TGAAGCTCATGCTGCTGCTGGAGGTCATCTCAGGTGAACGCTTGGCCAAGCCAGAGCGAGGCAA
GATGAGAGTGCACAAGATCTCCAACGTCAACAAGGCCCTGGATTTCATAGCCAGCAAAGGCGTC
AAACTGGTGTCCATCGGAGCCGAAGAAATCGTGGATGGGAATGTGAAGATGACCCTGGGCATGA
TCTGGACCATCATCCTGCGCTTTGCCATCCAGGACATCTCCGTGGAAGAGACTTCAGCCAAGGA
AGGGCTGCTCCTGTGGTGTCAGAGAAAGACAGCCCCTTACAAAAATGTCAACATCCAGAACTTC
CACATAAGCTGGAAGGATGGCCTCGGCTTCTGTGCCTTGATCCACCGACACCGGCCCGAGCTGA
TTGACTACGGGAAGCTGCGGAAGGATGATCCACTCACAAATCTGAATACGGCTTTTGACGTGGC
AGAGAAGTACCTGGACATCCCCAAGATGCTGGATGCCGAAGACATCGTTGGAACTGCCCGACCG
GATGAGAAAGCCATCATGACTTACGTGTCTAGCTTCTACCACGCCTTCTCTGGAGCCCAGAAGG
CGGAGACAGCAGCCAATCGCATCTGCAAGGTGTTGGCCGTCAACCAGGAGAACGAGCAGCTTAT
GGAAGACTACGAGAAGCTGGCCAGTGATCTGTTGGAGTGGATCCGCCGCACAATCCCGTGGCTG
GAGAACCGGGTGCCCGAGAACACCATGCATGCCATGCAACAGAAGCTGGAGGACTTCCGGGACT
ACCGGCGCCTGCACAAGCCGCCCAAGGTGCAGGAGAAGTGCCAGCTGGAGATCAACTTCAACAC
GCTGCAGACCAAGCTGCGGCTCAGCAACCGGCCTGCCTTCATGCCCTCTGAGGGCAGGATGGTC
TCGGACATCAACAATGCCTGGGGCTGCCTAGAGCAGGTGGAGAAGGGCTATGAGGAGTGGTTGC
TGAATGAGATCCGGAGGCTGGAGCGACTGGACCACCTGGCAGAGAAGTTCCGGCAGAAGGCCTC
CATCCACGAGGCCTGGACTGATGGCAAAGAGGCCATGCTGCGACAGAAGGACTATGAGACCGCC
ACCCTCTCTGAGATCAAGGCCCTGCTCAAGAAGCATGAGGCCTTCGAGAGTGACCTGGCTGCCC
ACCAGGACCGTGTGGAGCAGATTGCCGCCATCGCACAGGAGCTCAATGAGCTGGACTATTATGA
CTCACCCAGTGTCAACGCCCGTTGCCAAAAGATCTGTGACCAGTGGGACAATCTGGGGGCCCTA
ACTCAGAAGCGAAGGGAAGCTCTGGAGCGGACCGAGAAACTGCTGGAGACCATTGACCAGCTGT
ACTTGGAGTATGCCAAGCGGGCTGCACCCTTCAACAACTGGATGGAGGGGGCCATGGAGGACCT
GCAGGACACCTTCATTGTGCACACCATTGAGGAGATCCAGGGACTGACCACAGCCCATGAGCAG
TTCAAGGCCACCCTCCCTGATGCTGACAAGGAGCGCCTGGCCATCCTGGGCATCCACAATGAGG
TGTCCAAGATTGTCCAGACCTACCACGTCAATATGGCGGGCACCAACCCCTACACAACCATCAC
GCCTCAGGAGATCAATGGCAAATGGGACCACGTGCGGCAGCTGGTGCCTCGGAGGGACCAAGCT
CTGACGGAGGAGCATGCCCGACAGCAGCACAATGAGAGGCTACGCAAGCAGTTTGGAGCCCAGG
CCAATGTCATCGGGCCCTGGATCCAGACCAAGATGGAGGAGATCGGGAGGATCTCCATTGAGAT
GCATGGGACCCTGGAGGACCAGCTCAGCCACCTGCGGCAGTATGAGAAGAGCATCGTCAACTAC
AAGCCAAAGATTGACCAGCTGGAGGGCGACCACCAGCTCATCCAGGAGGCGCTCATCTTCGACA
ACAAGCACACCAACTACACCATGGAGCACATCCGTGTGGGCTGGGAGCAGCTGCTCACCACCAT
CGCCAGGACCATCAATGAGGTAGAGAACCAGATCCTGACCCGGGATGCCAAGGGCATCAGCCAG
GAGCAGATGAATGAGTTCCGGGCCTCCTTCAACCACTTTGACCGGGATCACTCCGGCACACTGG
GTCCCGAGGAGTTCAAAGCCTGCCTCATCAGCTTGGGTTATGATATTGGCAACGACCCCCAGAA
GAAGACAGGCATGATGGACACGGATGATTTCCGCGCCTGCCTGATCTCCATGGGTTACAACATG
GGAGAAGCAGAATTTGCCCGCATCATGAGCATTGTGGACCCCAACCGCCTGGGGGTAGTGACAT
TCCAGGCCTTCATTGACTTCATGTCCCGCGAGACAGCCGACACAGATACAGCAGACCAAGTCAT
GGCTTCCTTCAAGATCCTGGCCGGGGACAAGAACTATATTACCATGGACGAACTGCGCCGCGAG
CTGCCGCCCGACCAGGCTGAGTACTGCATCGCGCGGATGGCCCCCTACACCGGCCCCGACTCCG
TGCCAGGTGCTCTGGACTACATGTCCTTCTCCACGGCGCTGTACGGCGAGAGTGACCTCTAATC
CACCCCGCCCGGCCGCCCTCGTCTTGTGCGCCGTGCCCTGCCTTGCACCTCTGCCGTCGCCCAT
CTCCTGCCTGGGTTCGGTTTCAGCTCCCAGCCTCCACCCGGGTGAGCTGGGGCCCACGTGGCAT
CGATCCTCCCTGCCCGCGAAGTGACAGTTTACAAAATTATTTTCTGCAAAAAAGAAAAAAAGTT
ACGTTAAAAACCAAAAAACTACATATTTTATTATAGAAAAAGTATTTTTTTCTCCACCAGACAA
ATGGAAAAAAAGAGGAAAGATTAACTATTTGCACCGAAATGTCTTGTTTTGTTGCGACATAGGA
AAATAACCAAGCACAAAGTTATATTCCATCCTTTTTACTGATTTTTTTTCTTCTATCTGTTCCA
TCTGCTGTATTCATTTCTCCAATCTCATGTCCACTTTGGTGTGGGAGTCGGGGTAGGGGGTACT
CTTGTCAAAAGGCACATTGGTGCATGTGTGTTTGCTAGCTCACTTGTCCATGAAAATATTTTAT
GATATTAAAGAAAATCTTTTGAAATGGCTGTTTTTTAAGGAAGAGAATTTATGTGGCTTCTCAT
TTTTAAATCCCCTCAGAGGTGTGACTAGTCTCTTTATCAGCACACACTTAAAAAATTTTTAATA
TTGTCTATTAAAAATAGGACAAACTTGGAGAGTATGGACAGCTTTGATATTGCTTGGCACAGAT
GGTATTAAAACAACCACACTCCTATGA

hide sequence

RefSeq Acc Id:

XM_034937714 ⟹ XP_034793605

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	15	69,990,975 - 70,096,582 (-)	NCBI
NHGRI_mPanPan1	14	69,207,296 - 69,312,923 (-)	NCBI
Mhudiblu_PPA_v0	14	49,461,127 - 49,565,986 (-)	NCBI

RefSeq Acc Id:

XM_055097732 ⟹ XP_054953707

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	15	69,995,107 - 70,096,582 (-)	NCBI
NHGRI_mPanPan1	14	69,211,621 - 69,312,947 (-)	NCBI

RefSeq Acc Id:

XM_055097733 ⟹ XP_054953708

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	15	69,990,975 - 70,096,486 (-)	NCBI
NHGRI_mPanPan1	14	69,207,296 - 69,312,922 (-)	NCBI

RefSeq Acc Id:

XM_063596262 ⟹ XP_063452332

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	15	69,990,975 - 70,096,582 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_003824133	(Get FASTA)	NCBI Sequence Viewer
	XP_003824134	(Get FASTA)	NCBI Sequence Viewer
	XP_003824135	(Get FASTA)	NCBI Sequence Viewer
	XP_034793605	(Get FASTA)	NCBI Sequence Viewer
	XP_054953707	(Get FASTA)	NCBI Sequence Viewer
	XP_054953708	(Get FASTA)	NCBI Sequence Viewer
	XP_063452332	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSPPAP00000028365
	ENSPPAP00000028365.1
	ENSPPAP00000028370
	ENSPPAP00000028370.1
	ENSPPAP00000028375
	ENSPPAP00000028375.1

RefSeq Acc Id:	XP_003824135 ⟸ XM_003824087
- Peptide Label:	isoform X2
- UniProtKB:	A0A2R9BFF0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDHYDSQQTNDYMQPEEDWDRDLLLDPAWEKQQRKTFTAWCNSHLRKAGTQIENIEEDFRDGLK LMLLLEVISGERLAKPERGKMRVHKISNVNKALDFIASKGVKLVSIGAEEIVDGNVKMTLGMIW TIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNIQNFHISWKDGLGFCALIHRHRPELID YGKLRKDDPLTNLNTAFDVAEKYLDIPKMLDAEDIVGTARPDEKAIMTYVSSFYHAFSGAQKAE TAANRICKVLAVNQENEQLMEDYEKLASDLLEWIRRTIPWLENRVPENTMHAMQQKLEDFRDYR RLHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGRMVSDINNAWGCLEQVEKGYEEWLLN EIRRLERLDHLAEKFRQKASIHEAWTDGKEAMLRQKDYETATLSEIKALLKKHEAFESDLAAHQ DRVEQIAAIAQELNELDYYDSPSVNARCQKICDQWDNLGALTQKRREALERTEKLLETIDQLYL EYAKRAAPFNNWMEGAMEDLQDTFIVHTIEEIQGLTTAHEQFKATLPDADKERLAILGIHNEVS KIVQTYHVNMAGTNPYTTITPQEINGKWDHVRQLVPRRDQALTEEHARQQHNERLRKQFGAQAN VIGPWIQTKMEEIGRISIEMHGTLEDQLSHLRQYEKSIVNYKPKIDQLEGDHQLIQEALIFDNK HTNYTMEHIRVGWEQLLTTIARTINEVENQILTRDAKGISQEQMNEFRASFNHFDRDHSGTLGP EEFKACLISLGYDIGNDPQKKTGMMDTDDFRACLISMGYNMGEAEFARIMSIVDPNRLGVVTFQ AFIDFMSRETADTDTADQVMASFKILAGDKNYITMDELRRELPPDQAEYCIARMAPYTGPDSVP GALDYMSFSTALYGESDL hide sequence

RefSeq Acc Id:	XP_003824134 ⟸ XM_003824086
- Peptide Label:	isoform X4
- UniProtKB:	A0A2R9BFF6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDHYDSQQTNDYMQPEEDWDRDLLLDPAWEKQQRKTFTAWCNSHLRKAGTQIENIEEDFRDGLK LMLLLEVISGERLAKPERGKMRVHKISNVNKALDFIASKGVKLVSIGAEEIVDGNVKMTLGMIW TIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNIQNFHISWKDGLGFCALIHRHRPELID YGKLRKDDPLTNLNTAFDVAEKYLDIPKMLDAEDIVGTARPDEKAIMTYVSSFYHAFSGAQKAE TAANRICKVLAVNQENEQLMEDYEKLASDLLEWIRRTIPWLENRVPENTMHAMQQKLEDFRDYR RLHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGRMVSDINNAWGCLEQVEKGYEEWLLN EIRRLERLDHLAEKFRQKASIHEAWTDGKEAMLRQKDYETATLSEIKALLKKHEAFESDLAAHQ DRVEQIAAIAQELNELDYYDSPSVNARCQKICDQWDNLGALTQKRREALERTEKLLETIDQLYL EYAKRAAPFNNWMEGAMEDLQDTFIVHTIEEIQGLTTAHEQFKATLPDADKERLAILGIHNEVS KIVQTYHVNMAGTNPYTTITPQEINGKWDHVRQLVPRRDQALTEEHARQQHNERLRKQFGAQAN VIGPWIQTKMEEIGRISIEMHGTLEDQLSHLRQYEKSIVNYKPKIDQLEGDHQLIQEALIFDNK HTNYTMEHIRVGWEQLLTTIARTINEVENQILTRDAKGISQEQMNEFRASFNHFDRKKTGMMDT DDFRACLISMGYNMGEAEFARIMSIVDPNRLGVVTFQAFIDFMSRETADTDTADQVMASFKILA GDKNYITMDELRRELPPDQAEYCIARMAPYTGPDSVPGALDYMSFSTALYGESDL hide sequence

RefSeq Acc Id:	XP_003824133 ⟸ XM_003824085
- Peptide Label:	isoform X3
- UniProtKB:	A0A2R9BFG1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDHYDSQQTNDYMQPEEDWDRDLLLDPAWEKQQRKTFTAWCNSHLRKAGTQIENIEEDFRDGLK LMLLLEVISGERLAKPERGKMRVHKISNVNKALDFIASKGVKLVSIGAEEIVDGNVKMTLGMIW TIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNIQNFHISWKDGLGFCALIHRHRPELID YGKLRKDDPLTNLNTAFDVAEKYLDIPKMLDAEDIVGTARPDEKAIMTYVSSFYHAFSGAQKAE TAANRICKVLAVNQENEQLMEDYEKLASDLLEWIRRTIPWLENRVPENTMHAMQQKLEDFRDYR RLHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGRMVSDINNAWGCLEQVEKGYEEWLLN EIRRLERLDHLAEKFRQKASIHEAWTDGKEAMLRQKDYETATLSEIKALLKKHEAFESDLAAHQ DRVEQIAAIAQELNELDYYDSPSVNARCQKICDQWDNLGALTQKRREALERTEKLLETIDQLYL EYAKRAAPFNNWMEGAMEDLQDTFIVHTIEEIQGLTTAHEQFKATLPDADKERLAILGIHNEVS KIVQTYHVNMAGTNPYTTITPQEINGKWDHVRQLVPRRDQALTEEHARQQHNERLRKQFGAQAN VIGPWIQTKMEEIGRISIEMHGTLEDQLSHLRQYEKSIVNYKPKIDQLEGDHQLIQEALIFDNK HTNYTMEHIRVGWEQLLTTIARTINEVENQILTRDAKGISQEQMNEFRASFNHFDRDHSGTLGP EEFKACLISLGYDIGNDPQGEAEFARIMSIVDPNRLGVVTFQAFIDFMSRETADTDTADQVMAS FKILAGDKNYITMDELRRELPPDQAEYCIARMAPYTGPDSVPGALDYMSFSTALYGESDL hide sequence

RefSeq Acc Id:	XP_034793605 ⟸ XM_034937714
- Peptide Label:	isoform X5

RefSeq Acc Id:

ENSPPAP00000028370 ⟸ ENSPPAT00000051217

RefSeq Acc Id:

ENSPPAP00000028365 ⟸ ENSPPAT00000051212

RefSeq Acc Id:

ENSPPAP00000028375 ⟸ ENSPPAT00000051222

RefSeq Acc Id:	XP_054953708 ⟸ XM_055097733
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_054953707 ⟸ XM_055097732
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_063452332 ⟸ XM_063596262
- Peptide Label:	isoform X7

Protein Domains

Calponin-homology (CH) EF-hand

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSPPAG00000037190	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSPPAT00000051212.1	UniProtKB/TrEMBL
	ENSPPAT00000051217.1	UniProtKB/TrEMBL
	ENSPPAT00000051222.1	UniProtKB/TrEMBL
Gene3D-CATH	1.10.418.10	UniProtKB/TrEMBL
	1.20.58.60	UniProtKB/TrEMBL
	EF-hand	UniProtKB/TrEMBL
InterPro	Actinin_actin-bd_CS	UniProtKB/TrEMBL
	CH-domain	UniProtKB/TrEMBL
	CH_dom_sf	UniProtKB/TrEMBL
	EF-hand-dom_pair	UniProtKB/TrEMBL
	EF-hand_Ca_insen	UniProtKB/TrEMBL
	EF_Hand_1_Ca_BS	UniProtKB/TrEMBL
	EF_hand_dom	UniProtKB/TrEMBL
	Spectrin/alpha-actinin	UniProtKB/TrEMBL
	Spectrin_repeat	UniProtKB/TrEMBL
KEGG Report	pps:100979183	UniProtKB/TrEMBL
NCBI Gene	ACTN1	ENTREZGENE
PANTHER	ALPHA-ACTININ-1	UniProtKB/TrEMBL
	SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN	UniProtKB/TrEMBL
Pfam	EF-hand_6	UniProtKB/TrEMBL
	EF-hand_8	UniProtKB/TrEMBL
	EFhand_Ca_insen	UniProtKB/TrEMBL
	PF00307	UniProtKB/TrEMBL
	Spectrin	UniProtKB/TrEMBL
PROSITE	ACTININ_1	UniProtKB/TrEMBL
	ACTININ_2	UniProtKB/TrEMBL
	EF_HAND_1	UniProtKB/TrEMBL
	EF_HAND_2	UniProtKB/TrEMBL
	PS50021	UniProtKB/TrEMBL
SMART	EFh	UniProtKB/TrEMBL
	efhand_Ca_insen	UniProtKB/TrEMBL
	SM00033	UniProtKB/TrEMBL
	SPEC	UniProtKB/TrEMBL
Superfamily-SCOP	Spectrin repeat	UniProtKB/TrEMBL
	SSF47473	UniProtKB/TrEMBL
	SSF47576	UniProtKB/TrEMBL
UniProt	A0A2R9BFF0	ENTREZGENE, UniProtKB/TrEMBL
	A0A2R9BFF6	ENTREZGENE, UniProtKB/TrEMBL
	A0A2R9BFG1	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

Imported Annotations - PID (archival)

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

Imported Annotations - PID (archival)