B3GNT2 (UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2) - Rat Genome Database

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Gene: B3GNT2 (UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2) Pan paniscus
Analyze
Symbol: B3GNT2
Name: UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2
RGD ID: 11744109
Description: ENCODES a protein that exhibits N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase activity (ortholog); INVOLVED IN axon guidance (ortholog); cellular response to leukemia inhibitory factor (ortholog); poly-N-acetyllactosamine biosynthetic process (ortholog); ASSOCIATED WITH Graves' disease (ortholog); rheumatoid arthritis (ortholog); schizophrenia (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.12A63,409,166 - 63,437,801 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A63,435,289 - 63,436,482 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v02A62,276,662 - 62,305,286 (+)NCBIMhudiblu_PPA_v0panPan3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Molecular Function

References

Genomics

Comparative Map Data
B3GNT2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.12A63,409,166 - 63,437,801 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A63,435,289 - 63,436,482 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v02A62,276,662 - 62,305,286 (+)NCBIMhudiblu_PPA_v0panPan3
B3GNT2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl262,196,115 - 62,224,731 (+)EnsemblGRCh38hg38GRCh38
GRCh38262,196,115 - 62,224,731 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh37262,423,250 - 62,451,866 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36262,276,766 - 62,305,370 (+)NCBINCBI36hg18NCBI36
Build 34262,334,924 - 62,363,515NCBI
Celera262,267,974 - 62,296,577 (+)NCBI
Cytogenetic Map2p15NCBI
HuRef262,161,876 - 62,190,478 (+)NCBIHuRef
CHM1_1262,353,514 - 62,382,109 (+)NCBICHM1_1
B3gnt2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391122,784,739 - 22,810,336 (-)NCBIGRCm39mm39
GRCm39 Ensembl1122,709,738 - 22,810,961 (-)Ensembl
GRCm381122,834,739 - 22,860,336 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1122,759,738 - 22,860,961 (-)EnsemblGRCm38mm10GRCm38
MGSCv371122,734,739 - 22,760,336 (-)NCBIGRCm37mm9NCBIm37
MGSCv361122,734,747 - 22,765,435 (-)NCBImm8
Celera1124,970,900 - 24,996,043 (-)NCBICelera
Cytogenetic Map11A3.2NCBI
cM Map1114.22NCBI
B3gnt2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21496,808,473 - 96,833,674 (-)NCBImRatBN7.2
mRatBN7.2 Ensembl1496,806,664 - 96,835,273 (-)Ensembl
Rnor_6.014107,592,336 - 107,617,189 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl14107,592,336 - 107,617,161 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.014107,652,782 - 107,677,930 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.414103,499,471 - 103,524,296 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.114103,519,717 - 103,542,783 (-)NCBI
Celera1495,796,439 - 95,821,264 (-)NCBICelera
Cytogenetic Map14q22NCBI
B3gnt2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542421,859,901 - 21,888,722 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495542421,859,901 - 21,888,722 (-)NCBIChiLan1.0ChiLan1.0
B3GNT2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11062,170,262 - 62,239,010 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1062,145,117 - 62,146,310 (+)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1062,145,117 - 62,146,310 (+)NCBICanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1062,006,771 - 62,127,039 (+)NCBI
ROS_Cfam_1.01063,126,016 - 63,246,466 (+)NCBI
UMICH_Zoey_3.11062,809,530 - 62,929,648 (+)NCBI
UNSW_CanFamBas_1.01063,112,620 - 63,232,848 (+)NCBI
UU_Cfam_GSD_1.01063,409,638 - 63,529,912 (+)NCBI
B3gnt2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440629221,059,873 - 21,089,048 (-)NCBI
SpeTri2.0NW_0049364917,482,226 - 7,511,419 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
B3GNT2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl379,667,454 - 79,857,384 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1379,671,393 - 79,704,049 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2383,442,753 - 83,475,397 (-)NCBISscrofa10.2Sscrofa10.2susScr3
B3GNT2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11444,748,997 - 44,776,815 (-)NCBI
ChlSab1.1 Ensembl1444,750,308 - 44,751,501 (-)Ensembl
Vero_WHO_p1.0NW_02366604567,060,099 - 67,087,631 (+)NCBI
B3gnt2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462476211,202,143 - 11,403,617 (-)NCBI


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_003830876 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide SSBP01000171 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSPPAT00000027027   ⟹   ENSPPAP00000006164
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl2A63,435,289 - 63,436,482 (+)Ensembl
RefSeq Acc Id: XM_003830876   ⟹   XP_003830924
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.12A63,409,166 - 63,437,801 (+)NCBI
Mhudiblu_PPA_v02A62,276,662 - 62,305,286 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_003830924 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_003830924   ⟸   XM_003830876
- Sequence:
RefSeq Acc Id: ENSPPAP00000006164   ⟸   ENSPPAT00000027027


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000024510 Ensembl, ENTREZGENE
Ensembl Protein ENSPPAP00000006164 ENTREZGENE
NCBI Gene B3GNT2 ENTREZGENE