ZNF14 (zinc finger protein 14) - Rat Genome Database

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Gene: ZNF14 (zinc finger protein 14) Pan paniscus
Analyze
Symbol: ZNF14
Name: zinc finger protein 14
RGD ID: 11742367
Description: ENCODES a protein that exhibits DNA-binding transcription factor activity, RNA polymerase II-specific (inferred); metal ion binding (inferred); RNA polymerase II cis-regulatory region sequence-specific DNA binding (inferred); INVOLVED IN regulation of DNA-templated transcription (inferred); regulation of transcription by RNA polymerase II (inferred); ASSOCIATED WITH genetic disease (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Rat
Squirrel
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22024,554,361 - 24,596,430 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11923,560,635 - 23,602,640 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01919,147,832 - 19,170,814 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11920,142,023 - 20,164,120 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1920,142,108 - 20,145,586 (-)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
ZNF14
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22024,554,361 - 24,596,430 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11923,560,635 - 23,602,640 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01919,147,832 - 19,170,814 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11920,142,023 - 20,164,120 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1920,142,108 - 20,145,586 (-)Ensemblpanpan1.1panPan2
ZNF14
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381919,710,472 - 19,733,112 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1919,710,472 - 19,733,112 (-)EnsemblGRCh38hg38GRCh38
GRCh371919,821,281 - 19,843,921 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361919,682,281 - 19,704,921 (-)NCBINCBI36Build 36hg18NCBI36
Build 341919,682,281 - 19,704,921NCBI
Celera1919,725,244 - 19,749,091 (-)NCBICelera
Cytogenetic Map19p13.11NCBI
HuRef1919,383,308 - 19,405,962 (-)NCBIHuRef
CHM1_11919,822,032 - 19,844,682 (-)NCBICHM1_1
T2T-CHM13v2.01919,847,997 - 19,870,637 (-)NCBIT2T-CHM13v2.0
Zfp347
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr878,110,793 - 8,130,161 (+)NCBIGRCr8
mRatBN7.277,460,543 - 7,479,378 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl77,459,701 - 7,484,430 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx710,392,480 - 10,404,636 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0712,268,159 - 12,280,315 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0710,079,883 - 10,092,040 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.079,974,310 - 9,990,960 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0710,136,354 - 10,153,004 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.478,930,166 - 8,940,590 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.178,930,165 - 8,940,590 (+)NCBI
Celera75,678,604 - 5,690,762 (+)NCBICelera
Cytogenetic Map7q11NCBI
LOC101964411
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118202,273,339 - 202,278,868 (-)NCBIHiC_Itri_2
SpeTri2.0NW_0049365961,822,534 - 1,826,715 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ZNF14
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1618,160,412 - 18,181,105 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl618,161,290 - 18,164,749 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660741,109,256 - 1,132,465 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSPPAT00000050435   ⟹   ENSPPAP00000027593
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1920,142,108 - 20,145,586 (-)Ensembl
RefSeq Acc Id: XM_024926772   ⟹   XP_024782540
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22024,554,361 - 24,596,430 (-)NCBI
NHGRI_mPanPan11923,560,635 - 23,602,640 (-)NCBI
Mhudiblu_PPA_v01919,147,832 - 19,170,814 (-)NCBI
PanPan1.11920,142,023 - 20,164,120 (-)NCBI
Sequence:
RefSeq Acc Id: XM_034945097   ⟹   XP_034800988
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22024,554,361 - 24,583,770 (-)NCBI
NHGRI_mPanPan11923,560,635 - 23,584,172 (-)NCBI
Mhudiblu_PPA_v01919,148,197 - 19,151,908 (-)NCBI
Protein Sequences
Protein RefSeqs XP_024782540 (Get FASTA)   NCBI Sequence Viewer  
  XP_034800988 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000027593.1
Reference Protein Sequences
RefSeq Acc Id: XP_024782540   ⟸   XM_024926772
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_034800988   ⟸   XM_034945097
- Peptide Label: isoform X1
RefSeq Acc Id: ENSPPAP00000027593   ⟸   ENSPPAT00000050435
Protein Domains
C2H2-type   KRAB


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000036864 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000050435.1 UniProtKB/TrEMBL
Gene3D-CATH 6.10.140.140 UniProtKB/TrEMBL
  Classic Zinc Finger UniProtKB/TrEMBL
InterPro KRAB UniProtKB/TrEMBL
  KRAB_dom_sf UniProtKB/TrEMBL
  Znf_C2H2_sf UniProtKB/TrEMBL
  Znf_C2H2_type UniProtKB/TrEMBL
NCBI Gene ZNF14 ENTREZGENE
PANTHER ZINC FINGER PROTEIN UniProtKB/TrEMBL
  ZINC FINGER PROTEIN 281-RELATED UniProtKB/TrEMBL
Pfam KRAB UniProtKB/TrEMBL
  zf-C2H2 UniProtKB/TrEMBL
  zf-C2H2_6 UniProtKB/TrEMBL
PROSITE KRAB UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_1 UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_2 UniProtKB/TrEMBL
SMART KRAB UniProtKB/TrEMBL
  ZnF_C2H2 UniProtKB/TrEMBL
Superfamily-SCOP SSF109640 UniProtKB/TrEMBL
  SSF57667 UniProtKB/TrEMBL
UniProt A0A2R9BD76_PANPA UniProtKB/TrEMBL