RAB13 (RAB13, member RAS oncogene family) - Rat Genome Database
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Gene: RAB13 (RAB13, member RAS oncogene family) Pan paniscus
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Symbol: RAB13
Name: RAB13, member RAS oncogene family
RGD ID: 11740643
Description: ENCODES a protein that exhibits GTP binding (ortholog); protein kinase A catalytic subunit binding (ortholog); INVOLVED IN bicellular tight junction assembly (ortholog); cellular response to insulin stimulus (ortholog); cortical actin cytoskeleton organization (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; Rab family mediated signaling pathway; ASSOCIATED WITH autosomal dominant non-syndromic intellectual disability 18 (ortholog); COVID-19 (ortholog); FOUND IN bicellular tight junction (ortholog); cell-cell junction (ortholog); cytoplasmic vesicle (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: ras-related protein Rab-13
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11132,967,363 - 132,972,068 (-)NCBIpanpan1.1PanPan1.1panPan2
Mhudiblu_PPA_v01129,338,524 - 129,343,234 (-)NCBIMhudiblu_PPA_v0panPan3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

References

Genomics

Comparative Map Data
RAB13
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11132,967,363 - 132,972,068 (-)NCBIpanpan1.1PanPan1.1panPan2
Mhudiblu_PPA_v01129,338,524 - 129,343,234 (-)NCBIMhudiblu_PPA_v0panPan3
RAB13
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1153,981,605 - 153,986,358 (-)EnsemblGRCh38hg38GRCh38
GRCh38.p13 Ensembl1153,981,617 - 153,986,358 (-)EnsemblGRCh38hg38GRCh38
GRCh381153,981,650 - 153,990,644 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh371153,954,126 - 153,958,815 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361152,220,751 - 152,225,430 (-)NCBINCBI36hg18NCBI36
Build 341150,767,202 - 150,771,879NCBI
Celera1127,025,879 - 127,030,558 (-)NCBI
Cytogenetic Map1q21.3NCBI
HuRef1125,316,456 - 125,321,216 (-)NCBIHuRef
CHM1_11155,350,407 - 155,355,167 (-)NCBICHM1_1
Rab13
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39390,121,022 - 90,133,694 (+)NCBIGRCm39mm39
GRCm39 Ensembl390,121,002 - 90,133,692 (+)Ensembl
GRCm38390,213,715 - 90,226,387 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl390,213,695 - 90,226,385 (+)EnsemblGRCm38mm10GRCm38
MGSCv37390,024,739 - 90,029,885 (+)NCBIGRCm37mm9NCBIm37
MGSCv36390,306,744 - 90,311,890 (+)NCBImm8
Celera390,257,755 - 90,263,055 (+)NCBICelera
Cytogenetic Map3F1NCBI
cM Map339.21NCBI
Rab13
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.22175,674,894 - 175,680,043 (+)NCBI
Rnor_6.0 Ensembl2189,581,644 - 189,586,338 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.02189,581,209 - 189,586,358 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.02209,014,390 - 209,019,155 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42182,460,998 - 182,465,393 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12182,411,103 - 182,415,499 (+)NCBI
Celera2169,611,392 - 169,615,789 (+)NCBICelera
Cytogenetic Map2q34NCBI
Rab13
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_004955545590,021 - 594,191 (-)NCBIChiLan1.0ChiLan1.0
RAB13
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl743,153,002 - 43,156,720 (+)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.1743,152,903 - 43,156,720 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Rab13
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049365803,728,952 - 3,733,126 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RAB13
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1495,705,093 - 95,709,942 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.24104,606,045 - 104,611,247 (+)NCBISscrofa10.2Sscrofa10.2susScr3
RAB13
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1209,832,220 - 9,836,890 (+)NCBI
Rab13
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248853,239,581 - 3,243,539 (+)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_003817127   ⟹   XP_003817175
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.11132,967,363 - 132,972,068 (-)NCBI
Mhudiblu_PPA_v01129,338,524 - 129,343,234 (-)NCBI
Sequence:
RefSeq Acc Id: XM_034936248   ⟹   XP_034792139
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v01129,338,524 - 129,343,198 (-)NCBI
Protein Sequences
Protein RefSeqs XP_003817175 (Get FASTA)   NCBI Sequence Viewer  
  XP_034792139 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_003817175   ⟸   XM_003817127
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_034792139   ⟸   XM_034936248
- Peptide Label: isoform X1


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000028435 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSPPAP00000010418 ENTREZGENE, UniProtKB/TrEMBL
  ENSPPAP00000010421 UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000033068 UniProtKB/TrEMBL
  ENSPPAT00000033071 UniProtKB/TrEMBL
InterPro P-loop_NTPase UniProtKB/TrEMBL
  Small_GTP-bd_dom UniProtKB/TrEMBL
  Small_GTPase UniProtKB/TrEMBL
KEGG Report pps:100977458 UniProtKB/TrEMBL
NCBI Gene RAB13 ENTREZGENE
Pfam Ras UniProtKB/TrEMBL
Superfamily-SCOP SSF52540 UniProtKB/TrEMBL
TIGRFAMs small_GTP UniProtKB/TrEMBL
UniProt A0A2R8ZZK8_PANPA UniProtKB/TrEMBL
  A0A2R9A0Q3_PANPA UniProtKB/TrEMBL