LTBP2 (latent transforming growth factor beta binding protein 2) - Rat Genome Database

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Gene: LTBP2 (latent transforming growth factor beta binding protein 2) Pan paniscus
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Symbol: LTBP2
Name: latent transforming growth factor beta binding protein 2
RGD ID: 11738716
Description: INVOLVED IN supramolecular fiber organization (ortholog); ASSOCIATED WITH autosomal dominant isolated ectopia lentis 1 (ortholog); buphthalmos (ortholog); exfoliation syndrome (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: latent-transforming growth factor beta-binding protein 2; LOW QUALITY PROTEIN: latent-transforming growth factor beta-binding protein 2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11473,899,154 - 74,012,203 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1473,901,851 - 74,011,914 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01455,051,325 - 55,164,613 (-)NCBIMhudiblu_PPA_v0panPan3
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Comparative Map Data
LTBP2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11473,899,154 - 74,012,203 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1473,901,851 - 74,011,914 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01455,051,325 - 55,164,613 (-)NCBIMhudiblu_PPA_v0panPan3
LTBP2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1474,498,183 - 74,612,378 (-)EnsemblGRCh38hg38GRCh38
GRCh381474,498,183 - 74,612,593 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh371474,964,886 - 75,078,940 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361474,034,639 - 74,148,787 (-)NCBINCBI36hg18NCBI36
Build 341474,034,639 - 74,148,787NCBI
Celera1455,003,271 - 55,117,403 (-)NCBI
Cytogenetic Map14q24.3NCBI
HuRef1455,133,330 - 55,247,309 (-)NCBIHuRef
CHM1_11474,904,422 - 75,018,171 (-)NCBICHM1_1
Ltbp2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391284,829,986 - 84,923,581 (-)NCBIGRCm39mm39
GRCm39 Ensembl1284,829,986 - 84,923,306 (-)Ensembl
GRCm381284,783,212 - 84,876,558 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1284,783,212 - 84,876,532 (-)EnsemblGRCm38mm10GRCm38
MGSCv371286,124,162 - 86,217,445 (-)NCBIGRCm37mm9NCBIm37
MGSCv361285,672,960 - 85,766,280 (-)NCBImm8
Celera1286,239,349 - 86,332,994 (-)NCBICelera
Cytogenetic Map12D1NCBI
Ltbp2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.26104,429,947 - 104,530,498 (-)NCBImRatBN7.2
mRatBN7.2 Ensembl6104,429,947 - 104,526,208 (-)Ensembl
Rnor_6.06108,500,114 - 108,596,653 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl6108,500,112 - 108,596,569 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.06116,955,322 - 117,049,306 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.46108,826,446 - 108,924,746 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.16108,829,901 - 108,928,202 (-)NCBI
Celera6102,254,815 - 102,349,980 (-)NCBICelera
Cytogenetic Map6q31NCBI
Ltbp2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955523932,347 - 1,003,256 (+)EnsemblChiLan1.0
ChiLan1.0NW_004955523919,220 - 1,005,747 (+)NCBIChiLan1.0ChiLan1.0
LTBP2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1847,657,618 - 47,758,257 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl847,659,363 - 47,760,938 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha847,340,607 - 47,442,115 (-)NCBI
ROS_Cfam_1.0847,883,641 - 47,985,169 (-)NCBI
UMICH_Zoey_3.1847,554,781 - 47,656,222 (-)NCBI
UNSW_CanFamBas_1.0847,576,054 - 47,677,565 (-)NCBI
UU_Cfam_GSD_1.0847,974,056 - 48,075,556 (-)NCBI
Ltbp2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440864028,277,917 - 28,386,253 (+)NCBI
SpeTri2.0NW_0049364883,682,044 - 3,790,988 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
LTBP2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl797,745,396 - 97,852,502 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1797,744,974 - 97,852,848 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.27103,589,203 - 103,694,470 (-)NCBISscrofa10.2Sscrofa10.2susScr3
LTBP2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12451,707,348 - 51,823,449 (-)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl2451,708,479 - 51,823,347 (-)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366605339,940,753 - 40,055,605 (-)NCBIVero_WHO_p1.0
Ltbp2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462473427,058,531 - 27,162,229 (+)NCBIHetGla_female_1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSPPAT00000051951   ⟹   ENSPPAP00000029103
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1473,901,851 - 74,011,914 (-)Ensembl
RefSeq Acc Id: XM_008977905   ⟹   XP_008976153
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.11473,899,154 - 74,012,203 (-)NCBI
Mhudiblu_PPA_v01455,051,325 - 55,164,613 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004666234
RefSeq Status:
Type: NON-CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v01455,054,040 - 55,164,507 (-)NCBI
Protein Sequences
Protein RefSeqs XP_008976153 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_008976153   ⟸   XM_008977905
- Sequence:
RefSeq Acc Id: ENSPPAP00000029103   ⟸   ENSPPAT00000051951


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000037513 Ensembl, ENTREZGENE
NCBI Gene LTBP2 ENTREZGENE