EPM2AIP1 (EPM2A interacting protein 1) - Rat Genome Database

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Gene: EPM2AIP1 (EPM2A interacting protein 1) Pan paniscus
Analyze
Symbol: EPM2AIP1
Name: EPM2A interacting protein 1
RGD ID: 11732822
Description: ENCODES a protein that exhibits identical protein binding (inferred); INVOLVED IN glycogen biosynthetic process (ortholog); positive regulation of glycogen (starch) synthase activity (ortholog); positive regulation of glycogen biosynthetic process (ortholog); ASSOCIATED WITH Lynch syndrome (ortholog); Visceral Heterotaxy 4, Autosomal (ortholog); FOUND IN cytoplasm (inferred); cytoplasmic side of endoplasmic reticulum membrane (inferred); nucleus (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: EPM2A-interacting protein 1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1337,181,452 - 37,189,481 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl337,187,354 - 37,189,177 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0336,894,383 - 36,899,772 (-)NCBIMhudiblu_PPA_v0panPan3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

Genomics

Comparative Map Data
EPM2AIP1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1337,181,452 - 37,189,481 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl337,187,354 - 37,189,177 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0336,894,383 - 36,899,772 (-)NCBIMhudiblu_PPA_v0panPan3
EPM2AIP1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38336,985,043 - 36,993,131 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl336,985,043 - 36,993,131 (-)EnsemblGRCh38hg38GRCh38
GRCh37337,026,534 - 37,034,622 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36337,004,233 - 37,009,799 (-)NCBINCBI36hg18NCBI36
Build 34337,004,232 - 37,009,799NCBI
Celera336,970,125 - 36,977,560 (-)NCBI
Cytogenetic Map3p22.2NCBI
HuRef336,968,039 - 36,975,475 (-)NCBIHuRef
CHM1_1336,978,987 - 36,986,425 (-)NCBICHM1_1
T2T-CHM13v2.0336,986,417 - 36,994,504 (-)NCBI
Epm2aip1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm399111,100,913 - 111,108,161 (+)NCBIGRCm39mm39
GRCm39 Ensembl9111,100,997 - 111,108,161 (+)Ensembl
GRCm389111,271,845 - 111,279,093 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9111,271,929 - 111,279,093 (+)EnsemblGRCm38mm10GRCm38
MGSCv379111,174,349 - 111,181,597 (+)NCBIGRCm37mm9NCBIm37
MGSCv369111,116,745 - 111,123,905 (+)NCBImm8
Celera9110,995,011 - 111,002,246 (+)NCBICelera
Cytogenetic Map9F3NCBI
Epm2aip1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.28111,233,871 - 111,241,219 (+)NCBImRatBN7.2
mRatBN7.2 Ensembl8111,233,826 - 111,241,871 (+)Ensembl
Rnor_6.08119,524,039 - 119,531,387 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl8119,524,039 - 119,531,387 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.08118,865,643 - 118,872,586 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.48115,653,794 - 115,656,867 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.18115,673,241 - 115,721,997 (+)NCBI
Celera8110,515,491 - 110,522,839 (+)NCBICelera
Cytogenetic Map8q32NCBI
Epm2aip1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554213,888,007 - 3,889,833 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554213,882,486 - 3,889,851 (-)NCBIChiLan1.0ChiLan1.0
EPM2AIP1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1236,880,996 - 6,888,863 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl236,886,885 - 6,888,711 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha236,920,696 - 6,929,083 (-)NCBI
ROS_Cfam_1.0237,166,293 - 7,174,683 (-)NCBI
ROS_Cfam_1.0 Ensembl237,172,187 - 7,174,013 (-)Ensembl
UMICH_Zoey_3.1236,986,257 - 6,994,111 (-)NCBI
UNSW_CanFamBas_1.0237,128,462 - 7,136,312 (-)NCBI
UU_Cfam_GSD_1.0237,118,608 - 7,126,995 (-)NCBI
Epm2aip1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118193,410,275 - 193,417,791 (-)NCBI
SpeTri2.0NW_00493647326,548,847 - 26,556,334 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
EPM2AIP1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1321,878,146 - 21,879,972 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11321,877,863 - 21,886,210 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21323,777,539 - 23,782,636 (-)NCBISscrofa10.2Sscrofa10.2susScr3
EPM2AIP1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1152,418,518 - 2,422,637 (+)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl152,418,630 - 2,420,453 (+)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366606311,155,386 - 11,162,525 (+)NCBIVero_WHO_p1.0
Epm2aip1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462478815,108,361 - 15,110,187 (-)EnsemblHetGla_female_1.0hetGla2
HetGla 1.0NW_00462478815,102,663 - 15,110,354 (-)NCBIHetGla_female_1.0hetGla2


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_034956104 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide SSBP01000021 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSPPAT00000023318   ⟹   ENSPPAP00000005106
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl337,187,354 - 37,189,177 (-)Ensembl
RefSeq Acc Id: XM_034956104   ⟹   XP_034811995
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v0336,894,383 - 36,899,772 (-)NCBI
Protein Sequences
Protein RefSeqs XP_034811995 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_034811995   ⟸   XM_034956104
RefSeq Acc Id: ENSPPAP00000005106   ⟸   ENSPPAT00000023318
Protein Domains
zf-C2H2_12


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000021277 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSPPAP00000005106.1 UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000023318.1 UniProtKB/TrEMBL
InterPro EPM2A-int_1 UniProtKB/TrEMBL
  SPIN-DOC_Znf-C2H2 UniProtKB/TrEMBL
NCBI Gene EPM2AIP1 ENTREZGENE
PANTHER PTHR45913 UniProtKB/TrEMBL
Pfam zf-C2H2_12 UniProtKB/TrEMBL
UniProt A0A2R8ZQK5_PANPA UniProtKB/TrEMBL