HRH1 (histamine receptor H1) - Rat Genome Database

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Gene: HRH1 (histamine receptor H1) Pan paniscus
Analyze
Symbol: HRH1
Name: histamine receptor H1
RGD ID: 11730629
Description: ENCODES a protein that exhibits histamine binding (ortholog); INVOLVED IN chemical synaptic transmission (ortholog); memory (ortholog); negative regulation of steroid biosynthetic process (ortholog); ASSOCIATED WITH allergic rhinitis (ortholog); atherosclerosis (ortholog); Extravasation of Diagnostic and Therapeutic Materials (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: histamine H1 receptor
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1311,439,705 - 11,545,509 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl311,541,294 - 11,542,757 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0311,074,451 - 11,199,871 (+)NCBIMhudiblu_PPA_v0panPan3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytosol  (ISO)
plasma membrane  (ISO)

Molecular Function

References

Genomics

Comparative Map Data
HRH1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1311,439,705 - 11,545,509 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl311,541,294 - 11,542,757 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0311,074,451 - 11,199,871 (+)NCBIMhudiblu_PPA_v0panPan3
HRH1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl311,137,093 - 11,263,557 (+)EnsemblGRCh38hg38GRCh38
GRCh38311,137,238 - 11,263,557 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh37311,178,924 - 11,305,243 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36311,153,779 - 11,279,939 (+)NCBINCBI36hg18NCBI36
Build 34311,269,399 - 11,279,415NCBI
Celera311,114,216 - 11,240,363 (+)NCBI
Cytogenetic Map3p25.3NCBI
HuRef311,113,586 - 11,239,205 (+)NCBIHuRef
CHM1_1311,128,810 - 11,254,995 (+)NCBICHM1_1
Hrh1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm396114,374,897 - 114,460,259 (+)NCBIGRCm39mm39
GRCm39 Ensembl6114,374,897 - 114,460,257 (+)Ensembl
GRCm386114,397,936 - 114,483,298 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl6114,397,936 - 114,483,296 (+)EnsemblGRCm38mm10GRCm38
MGSCv376114,347,930 - 114,433,290 (+)NCBIGRCm37mm9NCBIm37
MGSCv366114,363,531 - 114,448,891 (+)NCBImm8
Celera6116,219,517 - 116,304,883 (+)NCBICelera
Cytogenetic Map6E3NCBI
cM Map653.05NCBI
Hrh1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.24147,564,781 - 147,649,353 (+)NCBImRatBN7.2
mRatBN7.2 Ensembl4147,645,995 - 147,647,455 (+)Ensembl
Rnor_6.04146,374,596 - 146,458,148 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4146,455,332 - 146,457,074 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04209,668,412 - 209,751,766 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44150,431,239 - 150,432,699 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.14150,676,079 - 150,677,540 (+)NCBI
Celera4136,197,254 - 136,198,714 (+)NCBICelera
RH 3.4 Map4950.0RGD
Cytogenetic Map4q42NCBI
Hrh1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542914,067,405 - 14,068,853 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495542914,022,332 - 14,069,931 (+)NCBIChiLan1.0ChiLan1.0
HRH1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1207,160,903 - 7,236,147 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl207,162,393 - 7,235,869 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha207,195,842 - 7,270,946 (-)NCBI
ROS_Cfam_1.0207,190,337 - 7,265,418 (-)NCBI
UMICH_Zoey_3.1206,906,408 - 6,981,475 (-)NCBI
UNSW_CanFamBas_1.0207,262,781 - 7,337,859 (-)NCBI
UU_Cfam_GSD_1.0207,234,680 - 7,309,540 (-)NCBI
Hrh1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494216,634,611 - 16,727,741 (+)NCBI
SpeTri2.0NW_0049366022,182,053 - 2,185,297 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
HRH1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1367,209,127 - 67,411,171 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11367,209,261 - 67,411,174 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21374,579,748 - 74,631,302 (+)NCBISscrofa10.2Sscrofa10.2susScr3
HRH1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12247,187,156 - 47,298,761 (+)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl2247,295,011 - 47,296,471 (+)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_023666041119,219,292 - 119,336,578 (-)NCBIVero_WHO_p1.0
Hrh1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624943483,230 - 505,678 (-)NCBIHetGla_female_1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSPPAT00000025733   ⟹   ENSPPAP00000005712
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl311,541,294 - 11,542,757 (+)Ensembl
RefSeq Acc Id: XM_008951723   ⟹   XP_008949971
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1311,518,794 - 11,545,509 (+)NCBI
Mhudiblu_PPA_v0311,092,868 - 11,199,871 (+)NCBI
Sequence:
RefSeq Acc Id: XM_014344153   ⟹   XP_014199639
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1311,439,705 - 11,545,509 (+)NCBI
Mhudiblu_PPA_v0311,092,868 - 11,199,871 (+)NCBI
Sequence:
RefSeq Acc Id: XM_034955794   ⟹   XP_034811685
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v0311,091,750 - 11,199,871 (+)NCBI
RefSeq Acc Id: XM_034955795   ⟹   XP_034811686
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v0311,074,451 - 11,199,871 (+)NCBI
RefSeq Acc Id: XM_034955796   ⟹   XP_034811687
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v0311,189,736 - 11,199,871 (+)NCBI
RefSeq Acc Id: XM_034955798   ⟹   XP_034811689
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v0311,188,349 - 11,199,871 (+)NCBI
RefSeq Acc Id: XM_034955799   ⟹   XP_034811690
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v0311,163,337 - 11,199,871 (+)NCBI
Reference Sequences
RefSeq Acc Id: XP_014199639   ⟸   XM_014344153
- Sequence:
RefSeq Acc Id: XP_008949971   ⟸   XM_008951723
- Sequence:
RefSeq Acc Id: XP_034811686   ⟸   XM_034955795
RefSeq Acc Id: XP_034811685   ⟸   XM_034955794
RefSeq Acc Id: XP_034811690   ⟸   XM_034955799
RefSeq Acc Id: XP_034811689   ⟸   XM_034955798
RefSeq Acc Id: XP_034811687   ⟸   XM_034955796
RefSeq Acc Id: ENSPPAP00000005712   ⟸   ENSPPAT00000025733


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000023416 Ensembl, ENTREZGENE
Ensembl Protein ENSPPAP00000005712 ENTREZGENE
NCBI Gene HRH1 ENTREZGENE