SASH3 (SAM and SH3 domain containing 3) - Rat Genome Database

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Gene: SASH3 (SAM and SH3 domain containing 3) Pan paniscus
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Symbol: SASH3
Name: SAM and SH3 domain containing 3
RGD ID: 11729498
Description: INVOLVED IN B cell homeostasis (ortholog); B cell proliferation (ortholog); CD4-positive, alpha-beta T cell differentiation (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Experimental Liver Cirrhosis (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (inferred); nucleus (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: SAM and SH3 domain-containing protein 3
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2X129,203,040 - 129,218,311 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1X129,206,616 - 129,221,925 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0X118,909,980 - 118,924,779 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1X129,207,049 - 129,222,342 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 EnsemblX129,207,049 - 129,222,342 (+)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
SASH3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2X129,203,040 - 129,218,311 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1X129,206,616 - 129,221,925 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0X118,909,980 - 118,924,779 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1X129,207,049 - 129,222,342 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 EnsemblX129,207,049 - 129,222,342 (+)Ensemblpanpan1.1panPan2
SASH3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38X129,779,949 - 129,795,201 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 EnsemblX129,779,949 - 129,795,201 (+)EnsemblGRCh38hg38GRCh38
GRCh37X128,913,925 - 128,929,177 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36X128,741,641 - 128,756,858 (+)NCBINCBI36Build 36hg18NCBI36
Build 34X128,639,494 - 128,654,709NCBI
CeleraX129,300,396 - 129,315,681 (+)NCBICelera
Cytogenetic MapXq26.1NCBI
HuRefX118,315,088 - 118,330,679 (+)NCBIHuRef
CHM1_1X128,825,238 - 128,840,527 (+)NCBICHM1_1
T2T-CHM13v2.0X128,098,744 - 128,113,978 (+)NCBIT2T-CHM13v2.0
Sash3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X47,235,313 - 47,250,442 (+)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX47,235,313 - 47,250,442 (+)EnsemblGRCm39 Ensembl
GRCm38X48,146,436 - 48,161,565 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX48,146,436 - 48,161,565 (+)EnsemblGRCm38mm10GRCm38
MGSCv37X45,499,704 - 45,514,740 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36X44,391,154 - 44,406,190 (+)NCBIMGSCv36mm8
CeleraX35,648,999 - 35,664,024 (+)NCBICelera
Cytogenetic MapXA4NCBI
cM MapX25.54NCBI
Sash3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X132,204,717 - 132,219,421 (+)NCBIGRCr8
mRatBN7.2X127,326,815 - 127,341,521 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 EnsemblX127,326,859 - 127,341,519 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_UtxX129,452,837 - 129,467,495 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0X133,023,434 - 133,038,098 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0X130,549,991 - 130,564,647 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0X134,979,637 - 134,994,351 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX134,979,646 - 134,994,349 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0X135,052,951 - 135,067,689 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X134,511,776 - 134,526,489 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
CeleraX126,277,336 - 126,292,010 (+)NCBICelera
Cytogenetic MapXq36NCBI
Sash3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554735,222,408 - 5,237,260 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554735,224,635 - 5,237,066 (-)NCBIChiLan1.0ChiLan1.0
SASH3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1X100,989,605 - 101,003,162 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 EnsemblX100,989,685 - 101,001,885 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_TashaX87,163,546 - 87,177,092 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0X102,841,088 - 102,854,632 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 EnsemblX102,841,145 - 102,854,642 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1X100,259,370 - 100,272,917 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0X102,105,560 - 102,119,104 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0X101,883,353 - 101,896,898 (+)NCBIUU_Cfam_GSD_1.0
Sash3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2X99,222,104 - 99,235,375 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364791,750,746 - 1,765,361 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364791,752,180 - 1,765,330 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SASH3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 EnsemblX106,373,954 - 106,389,444 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1X106,373,871 - 106,389,454 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2X122,142,841 - 122,158,398 (+)NCBISscrofa10.2Sscrofa10.2susScr3
SASH3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1X105,057,782 - 105,072,994 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 EnsemblX105,057,570 - 105,073,354 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366606542,472,786 - 42,488,013 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Sash3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247979,001,795 - 9,018,027 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247979,001,846 - 9,017,441 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


RefSeq Acc Id: ENSPPAT00000049435   ⟹   ENSPPAP00000026601
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 EnsemblX129,207,049 - 129,222,342 (+)Ensembl
RefSeq Acc Id: XM_003818929   ⟹   XP_003818977
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2X129,203,040 - 129,218,311 (+)NCBI
NHGRI_mPanPan1X129,206,626 - 129,221,925 (+)NCBI
Mhudiblu_PPA_v0X118,909,989 - 118,924,772 (+)NCBI
PanPan1.1X129,207,049 - 129,222,342 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008972344   ⟹   XP_008970592
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2X129,203,100 - 129,218,294 (+)NCBI
NHGRI_mPanPan1X129,206,616 - 129,221,908 (+)NCBI
Mhudiblu_PPA_v0X118,909,980 - 118,924,779 (+)NCBI
PanPan1.1X129,207,049 - 129,222,342 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_003818977 (Get FASTA)   NCBI Sequence Viewer  
  XP_008970592 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000026601
  ENSPPAP00000026601.1
RefSeq Acc Id: XP_008970592   ⟸   XM_008972344
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_003818977   ⟸   XM_003818929
- Peptide Label: isoform X2
- UniProtKB: A0A2R9BE84 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSPPAP00000026601   ⟸   ENSPPAT00000049435
Protein Domains
SAM   SH3


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000036392 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000049435.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.150.50 UniProtKB/TrEMBL
  SH3 Domains UniProtKB/TrEMBL
InterPro rSAM/SH3_domain-containing UniProtKB/TrEMBL
  SAM UniProtKB/TrEMBL
  SAM/pointed_sf UniProtKB/TrEMBL
  SASH3_SH3 UniProtKB/TrEMBL
  SH3-like_dom_sf UniProtKB/TrEMBL
  SH3_domain UniProtKB/TrEMBL
KEGG Report pps:100988912 UniProtKB/TrEMBL
NCBI Gene SASH3 ENTREZGENE
PANTHER PTHR12301:SF5 UniProtKB/TrEMBL
  SAM-DOMAIN, SH3 AND NUCLEAR LOCALIZATION SIGNALS PROTEIN RELATED UniProtKB/TrEMBL
Pfam SAM_1 UniProtKB/TrEMBL
  SH3_2 UniProtKB/TrEMBL
  SLY UniProtKB/TrEMBL
PROSITE SAM_DOMAIN UniProtKB/TrEMBL
  SH3 UniProtKB/TrEMBL
SMART SAM UniProtKB/TrEMBL
  SH3 UniProtKB/TrEMBL
Superfamily-SCOP SSF47769 UniProtKB/TrEMBL
  SSF50044 UniProtKB/TrEMBL
UniProt A0A2R9BE84 ENTREZGENE, UniProtKB/TrEMBL