NUP54 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 3 | 53,924,149 - 53,958,784 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 4 | 54,113,869 - 54,150,174 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 4 | 48,057,553 - 48,091,471 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 4 | 53,896,058 - 53,929,596 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 4 | 53,896,058 - 53,929,596 (+) | Ensembl | panpan1.1 | | panPan2 | |
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NUP54 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 4 | 76,114,664 - 76,148,397 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 4 | 76,107,562 - 76,148,485 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 4 | 77,035,817 - 77,069,550 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 4 | 77,254,841 - 77,288,679 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 4 | 77,392,996 - 77,426,834 | NCBI | | | | | Celera | 4 | 74,336,017 - 74,369,792 (-) | NCBI | | Celera | | | Cytogenetic Map | 4 | q21.1 | NCBI | | | | | HuRef | 4 | 72,788,244 - 72,821,694 (-) | NCBI | | HuRef | | | CHM1_1 | 4 | 77,012,297 - 77,046,159 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 4 | 79,455,330 - 79,489,069 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Nup54 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 5 | 92,563,399 - 92,583,117 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 5 | 92,563,399 - 92,583,078 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 5 | 92,415,540 - 92,435,259 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 5 | 92,415,540 - 92,435,219 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 5 | 92,844,566 - 92,864,225 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 5 | 93,490,746 - 93,510,323 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 5 | 90,564,003 - 90,583,663 (-) | NCBI | | Celera | | | Cytogenetic Map | 5 | E2 | NCBI | | | | | cM Map | 5 | 46.75 | NCBI | | | | |
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Nup54 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 14 | 15,901,936 - 15,920,335 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 14 | 15,617,630 - 15,636,029 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 14 | 15,617,679 - 15,636,028 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 14 | 15,625,954 - 15,644,122 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 14 | 16,944,808 - 16,962,972 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 14 | 15,640,226 - 15,658,388 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 14 | 17,123,434 - 17,141,832 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 14 | 17,123,360 - 17,141,767 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 14 | 17,039,514 - 17,057,924 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 14 | 17,178,761 - 17,197,062 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 14 | 17,178,760 - 17,197,061 (+) | NCBI | | | | | Celera | 14 | 15,012,204 - 15,030,485 (+) | NCBI | | Celera | | | Cytogenetic Map | 14 | p22 | NCBI | | | | |
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Nup54 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 | NW_004955433 | 853,921 - 879,861 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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NUP54 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 32 | 751,568 - 782,342 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 32 | 751,982 - 782,314 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 32 | 41,100,154 - 41,131,148 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 32 | 777,963 - 808,974 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 32 | 777,883 - 808,921 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 32 | 776,011 - 807,023 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 32 | 730,301 - 761,292 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 32 | 39,408,219 - 39,439,234 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Nup54 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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NUP54 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 8 | 71,792,155 - 71,833,157 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 8 | 71,792,153 - 71,833,180 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 8 | 75,992,615 - 76,028,904 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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NUP54 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 7 | 24,616,645 - 24,649,595 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 7 | 24,613,767 - 24,650,359 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666037 | 2,964,814 - 2,997,872 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Nup54 (Heterocephalus glaber - naked mole-rat) |
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