DNAJB13 (DnaJ heat shock protein family (Hsp40) member B13) - Rat Genome Database

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Gene: DNAJB13 (DnaJ heat shock protein family (Hsp40) member B13) Pan paniscus
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Symbol: DNAJB13
Name: DnaJ heat shock protein family (Hsp40) member B13
RGD ID: 11728379
Description: INVOLVED IN axonemal central apparatus assembly (ortholog); ASSOCIATED WITH intellectual disability (ortholog); primary ciliary dyskinesia (ortholog); primary ciliary dyskinesia 34 (ortholog); FOUND IN axoneme (ortholog); cytoplasm (ortholog); motile cilium (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: dnaJ homolog subfamily B member 13; LOW QUALITY PROTEIN: dnaJ homolog subfamily B member 13
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11172,330,907 - 72,350,025 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1172,330,992 - 72,349,858 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01169,022,757 - 69,043,006 (+)NCBIMhudiblu_PPA_v0panPan3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

Genomics

Comparative Map Data
DNAJB13
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11172,330,907 - 72,350,025 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1172,330,992 - 72,349,858 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01169,022,757 - 69,043,006 (+)NCBIMhudiblu_PPA_v0panPan3
DNAJB13
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1173,951,026 - 73,970,366 (+)EnsemblGRCh38hg38GRCh38
GRCh381173,950,621 - 73,970,287 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh371173,662,071 - 73,681,326 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361173,339,012 - 73,358,980 (+)NCBINCBI36hg18NCBI36
Celera1170,968,115 - 70,988,077 (+)NCBI
Cytogenetic Map11q13.4NCBI
HuRef1169,957,148 - 69,977,098 (+)NCBIHuRef
CHM1_11173,544,984 - 73,565,191 (+)NCBICHM1_1
Dnajb13
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm397100,152,218 - 100,182,834 (-)NCBIGRCm39mm39
GRCm39 Ensembl7100,150,923 - 100,164,167 (-)Ensembl
GRCm387100,503,011 - 100,514,815 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl7100,501,716 - 100,514,960 (-)EnsemblGRCm38mm10GRCm38
MGSCv377107,651,529 - 107,663,324 (-)NCBIGRCm37mm9NCBIm37
MGSCv367100,377,102 - 100,388,897 (-)NCBImm8
Celera7100,840,594 - 100,852,770 (-)NCBICelera
Cytogenetic Map7E2NCBI
Dnajb13
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21154,848,586 - 154,863,042 (-)NCBImRatBN7.2
mRatBN7.2 Ensembl1154,848,594 - 154,862,963 (-)Ensembl
Rnor_6.01165,515,718 - 165,530,163 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1165,515,726 - 165,530,095 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01171,716,964 - 171,731,389 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41157,931,493 - 157,945,870 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11158,010,293 - 158,024,663 (-)NCBI
Celera1152,931,878 - 152,946,255 (-)NCBICelera
Cytogenetic Map1q32NCBI
Dnajb13
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541417,597,478 - 17,613,724 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541417,599,549 - 17,613,724 (-)NCBIChiLan1.0ChiLan1.0
DNAJB13
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12124,314,242 - 24,326,605 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2124,314,248 - 24,338,253 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2124,081,296 - 24,093,657 (-)NCBI
ROS_Cfam_1.02124,520,646 - 24,533,012 (-)NCBI
UMICH_Zoey_3.12124,316,174 - 24,328,541 (-)NCBI
UNSW_CanFamBas_1.02124,516,090 - 24,528,456 (-)NCBI
UU_Cfam_GSD_1.02124,431,423 - 24,443,781 (-)NCBI
Dnajb13
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494761,442,502 - 61,456,388 (+)NCBI
SpeTri2.0NW_0049364983,042,151 - 3,055,966 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DNAJB13
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl98,342,476 - 8,355,406 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.198,342,207 - 8,358,617 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.299,131,889 - 9,161,469 (+)NCBISscrofa10.2Sscrofa10.2susScr3
DNAJB13
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1165,211,142 - 65,233,948 (+)NCBI
ChlSab1.1 Ensembl165,217,224 - 65,235,556 (+)Ensembl
Vero_WHO_p1.0NW_02366604360,651,238 - 60,672,126 (-)NCBI
Dnajb13
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248173,078,578 - 3,093,273 (-)NCBI


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_003814672 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide SSBP01000206 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSPPAT00000047664   ⟹   ENSPPAP00000024838
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1172,330,992 - 72,349,858 (+)Ensembl
RefSeq Acc Id: XM_003814672   ⟹   XP_003814720
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.11172,330,907 - 72,350,025 (+)NCBI
Mhudiblu_PPA_v01169,022,757 - 69,043,006 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_003814720 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_003814720   ⟸   XM_003814672
- Sequence:
RefSeq Acc Id: ENSPPAP00000024838   ⟸   ENSPPAT00000047664


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000035553 Ensembl, ENTREZGENE
NCBI Gene DNAJB13 ENTREZGENE