RANGRF (RAN guanine nucleotide release factor) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: RANGRF (RAN guanine nucleotide release factor) Pan paniscus
Analyze
Symbol: RANGRF
Name: RAN guanine nucleotide release factor
RGD ID: 11727752
Description: ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); small GTPase binding (ortholog); sodium channel regulator activity (ortholog); INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); positive regulation of protein localization to cell surface (ortholog); positive regulation of protein localization to plasma membrane (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); Cardiac Arrhythmias (ortholog); Diamond-Blackfan anemia (ortholog); FOUND IN caveola (ortholog); cytoplasm (ortholog); cytosol (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11748,101,744 - 48,103,394 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1748,101,744 - 48,103,394 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01743,369,556 - 43,371,025 (-)NCBIMhudiblu_PPA_v0panPan3
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Comparative Map Data
RANGRF
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11748,101,744 - 48,103,394 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1748,101,744 - 48,103,394 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01743,369,556 - 43,371,025 (-)NCBIMhudiblu_PPA_v0panPan3
RANGRF
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl178,288,654 - 8,290,092 (+)EnsemblGRCh38hg38GRCh38
GRCh38178,288,670 - 8,290,087 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh37178,191,988 - 8,193,405 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36178,132,714 - 8,134,130 (+)NCBINCBI36hg18NCBI36
Celera178,220,823 - 8,222,263 (+)NCBI
Cytogenetic Map17p13.1NCBI
HuRef178,087,401 - 8,088,841 (+)NCBIHuRef
CHM1_1178,200,890 - 8,202,330 (+)NCBICHM1_1
Rangrf
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391168,863,310 - 68,866,011 (-)NCBIGRCm39mm39
GRCm39 Ensembl1168,863,310 - 68,866,011 (-)Ensembl
GRCm381168,972,484 - 68,975,185 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1168,972,484 - 68,975,185 (-)EnsemblGRCm38mm10GRCm38
MGSCv371168,785,989 - 68,787,322 (-)NCBIGRCm37mm9NCBIm37
MGSCv361168,788,682 - 68,790,015 (-)NCBImm8
Celera1175,915,300 - 75,916,633 (-)NCBICelera
Cytogenetic Map11B3NCBI
Rangrf
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21053,677,467 - 53,678,880 (-)NCBImRatBN7.2
mRatBN7.2 Ensembl1053,677,467 - 53,678,840 (-)Ensembl
Rnor_6.01055,559,049 - 55,560,420 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1055,559,041 - 55,560,422 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01055,301,089 - 55,302,460 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41055,731,343 - 55,732,714 (-)NCBIRGSC3.4rn4RGSC3.4
Celera1052,843,782 - 52,845,153 (-)NCBICelera
Cytogenetic Map10q24NCBI
Rangrf
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554678,622,843 - 8,624,401 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554678,622,843 - 8,624,401 (-)NCBIChiLan1.0ChiLan1.0
RANGRF
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1533,084,355 - 33,085,810 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl533,084,397 - 33,085,812 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha533,220,241 - 33,221,698 (+)NCBI
ROS_Cfam_1.0533,187,232 - 33,188,689 (+)NCBI
UMICH_Zoey_3.1533,153,967 - 33,155,423 (+)NCBI
UNSW_CanFamBas_1.0533,109,932 - 33,111,388 (+)NCBI
UU_Cfam_GSD_1.0533,289,666 - 33,291,122 (+)NCBI
Rangrf
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560248,039,669 - 48,041,112 (+)NCBI
SpeTri2.0NW_0049365951,513,855 - 1,515,300 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RANGRF
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1253,485,280 - 53,525,756 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11253,484,584 - 53,486,716 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21255,960,779 - 55,962,215 (+)NCBISscrofa10.2Sscrofa10.2susScr3
RANGRF
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1167,654,235 - 7,655,851 (+)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl167,654,439 - 7,655,703 (+)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366605913,744,846 - 13,746,467 (-)NCBIVero_WHO_p1.0
Rangrf
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462478610,866,724 - 10,868,136 (+)NCBIHetGla_female_1.0hetGla2


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_003818066 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide SSBP01000175 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSPPAT00000023689   ⟹   ENSPPAP00000005196
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1748,101,744 - 48,103,394 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000023718   ⟹   ENSPPAP00000005204
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1748,102,013 - 48,103,042 (-)Ensembl
RefSeq Acc Id: XM_003818066   ⟹   XP_003818114
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.11748,101,744 - 48,103,394 (-)NCBI
Mhudiblu_PPA_v01743,369,556 - 43,371,025 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_003818114 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_003818114   ⟸   XM_003818066
- Sequence:
RefSeq Acc Id: ENSPPAP00000005196   ⟸   ENSPPAT00000023689
RefSeq Acc Id: ENSPPAP00000005204   ⟸   ENSPPAT00000023718


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000021562 Ensembl, ENTREZGENE
NCBI Gene RANGRF ENTREZGENE