NEK2 (NIMA related kinase 2) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: NEK2 (NIMA related kinase 2) Pan paniscus
Analyze
Symbol: NEK2
Name: NIMA related kinase 2
RGD ID: 11727028
Description: ENCODES a protein that exhibits protein kinase activity (ortholog); protein phosphatase binding (ortholog); INVOLVED IN blastocyst development (ortholog); centrosome separation (ortholog); chromosome segregation (ortholog); ASSOCIATED WITH COVID-19 (ortholog); gastrointestinal stromal tumor (ortholog); hepatocellular carcinoma (ortholog); FOUND IN centrosome (ortholog); condensed nuclear chromosome (ortholog); kinetochore (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: NIMA (never in mitosis gene a)-related kinase 2; serine/threonine-protein kinase Nek2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11192,088,393 - 192,105,737 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1192,092,885 - 192,105,737 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01187,225,947 - 187,243,605 (-)NCBIMhudiblu_PPA_v0panPan3
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Comparative Map Data
NEK2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11192,088,393 - 192,105,737 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1192,092,885 - 192,105,737 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01187,225,947 - 187,243,605 (-)NCBIMhudiblu_PPA_v0panPan3
NEK2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1211,658,657 - 211,675,630 (-)EnsemblGRCh38hg38GRCh38
GRCh381211,658,256 - 211,675,621 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh371211,831,598 - 211,848,963 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361209,902,745 - 209,915,590 (-)NCBINCBI36hg18NCBI36
Build 341208,224,516 - 208,237,362NCBI
Celera1185,063,198 - 185,076,042 (-)NCBI
Cytogenetic Map1q32.3NCBI
HuRef1182,509,044 - 182,526,419 (-)NCBIHuRef
CHM1_11213,104,002 - 213,121,393 (-)NCBICHM1_1
Nek2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391191,552,487 - 191,565,161 (+)NCBIGRCm39mm39
GRCm39 Ensembl1191,553,556 - 191,565,162 (+)Ensembl
GRCm381191,821,449 - 191,833,049 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1191,821,444 - 191,833,050 (+)EnsemblGRCm38mm10GRCm38
MGSCv371193,645,352 - 193,656,928 (+)NCBIGRCm37mm9NCBIm37
MGSCv361193,522,177 - 193,533,657 (+)NCBImm8
Celera1198,772,491 - 198,784,119 (+)NCBICelera
Cytogenetic Map1H6NCBI
cM Map196.94NCBI
Nek2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.213103,405,818 - 103,419,063 (+)NCBImRatBN7.2
mRatBN7.2 Ensembl13103,405,819 - 103,419,051 (+)Ensembl
Rnor_6.013110,511,546 - 110,524,750 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl13110,511,668 - 110,522,769 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.013115,071,708 - 115,084,946 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.413107,895,671 - 107,908,904 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.113108,084,908 - 108,096,196 (+)NCBI
Celera13102,845,789 - 102,858,739 (+)NCBICelera
Cytogenetic Map13q27NCBI
Nek2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554065,553,819 - 5,566,361 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554065,553,661 - 5,563,648 (+)NCBIChiLan1.0ChiLan1.0
NEK2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1710,039,617 - 10,052,511 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl710,040,187 - 10,052,512 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha79,617,334 - 9,630,223 (-)NCBI
ROS_Cfam_1.079,745,394 - 9,758,577 (-)NCBI
UMICH_Zoey_3.179,668,208 - 9,681,172 (-)NCBI
UNSW_CanFamBas_1.079,770,376 - 9,783,529 (-)NCBI
UU_Cfam_GSD_1.079,894,933 - 9,908,005 (-)NCBI
Nek2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934464,442,747 - 64,455,130 (+)NCBI
SpeTri2.0NW_0049365571,683,027 - 1,695,410 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NEK2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl9131,547,084 - 131,560,527 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.19131,547,044 - 131,560,527 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.29144,585,644 - 144,599,144 (+)NCBISscrofa10.2Sscrofa10.2susScr3
NEK2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12517,816,929 - 17,847,348 (+)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl2517,829,546 - 17,842,463 (+)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366605518,353,967 - 18,371,748 (+)NCBIVero_WHO_p1.0
Nek2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462477117,334,782 - 17,351,609 (-)NCBIHetGla_female_1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSPPAT00000044727   ⟹   ENSPPAP00000021923
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1192,092,885 - 192,105,737 (-)Ensembl
RefSeq Acc Id: XM_003814193   ⟹   XP_003814241
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.11192,092,885 - 192,105,737 (-)NCBI
Mhudiblu_PPA_v01187,230,762 - 187,243,605 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008966803   ⟹   XP_008965051
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.11192,092,885 - 192,105,717 (-)NCBI
Mhudiblu_PPA_v01187,230,762 - 187,243,605 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008966804   ⟹   XP_008965052
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.11192,088,393 - 192,105,717 (-)NCBI
Mhudiblu_PPA_v01187,225,947 - 187,243,605 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_003814241 (Get FASTA)   NCBI Sequence Viewer  
  XP_008965051 (Get FASTA)   NCBI Sequence Viewer  
  XP_008965052 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_008965052   ⟸   XM_008966804
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_003814241   ⟸   XM_003814193
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_008965051   ⟸   XM_008966803
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: ENSPPAP00000021923   ⟸   ENSPPAT00000044727


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000034163 Ensembl, ENTREZGENE
Ensembl Protein ENSPPAP00000021923 ENTREZGENE
NCBI Gene NEK2 ENTREZGENE