LOC100995145 (putative cystatin-9-like protein CST9LP1) - Rat Genome Database

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Gene: LOC100995145 (putative cystatin-9-like protein CST9LP1) Pan paniscus
Analyze
Symbol: LOC100995145
Name: putative cystatin-9-like protein CST9LP1
RGD ID: 11721091
Description: ENCODES a protein that exhibits cysteine-type endopeptidase inhibitor activity (inferred); INVOLVED IN antimicrobial humoral response (inferred); FOUND IN extracellular region (inferred); extracellular space (inferred)
Type: protein-coding
RefSeq Status: MODEL
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22124,426,810 - 24,430,815 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12024,423,643 - 24,427,618 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02023,496,311 - 23,499,201 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12023,846,979 - 23,849,868 (-)NCBIpanpan1.1PanPan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_003829367 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JARIFH020000021 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XM_003829367   ⟹   XP_003829415
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22124,426,810 - 24,430,815 (-)NCBI
NHGRI_mPanPan12024,423,643 - 24,427,618 (-)NCBI
Mhudiblu_PPA_v02023,496,311 - 23,499,201 (-)NCBI
PanPan1.12023,846,979 - 23,849,868 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_003829415 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000025719.1
Reference Protein Sequences
RefSeq Acc Id: XP_003829415   ⟸   XM_003829367
- UniProtKB: A0A2R9B7Z2 (UniProtKB/TrEMBL)
- Sequence:
Protein Domains
Cystatin


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000035983 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000048549.1 UniProtKB/TrEMBL
Gene3D-CATH 3.10.450.10 UniProtKB/TrEMBL
InterPro CST9-like UniProtKB/TrEMBL
  Cystatin_dom UniProtKB/TrEMBL
  Cystatin_sf UniProtKB/TrEMBL
KEGG Report pps:100995145 UniProtKB/TrEMBL
NCBI Gene LOC100995145 ENTREZGENE
PANTHER PTHR46945 UniProtKB/TrEMBL
  PTHR46945:SF2 UniProtKB/TrEMBL
Pfam Cystatin UniProtKB/TrEMBL
Superfamily-SCOP SSF54403 UniProtKB/TrEMBL
UniProt A0A2R9B7Z2 ENTREZGENE, UniProtKB/TrEMBL