KIF3B (kinesin family member 3B) - Rat Genome Database

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Gene: KIF3B (kinesin family member 3B) Pan paniscus
Analyze
Symbol: KIF3B
Name: kinesin family member 3B
RGD ID: 11718482
Description: ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN positive regulation of cytokinesis (ortholog); ASSOCIATED WITH genetic disease (ortholog); immunodeficiency-centromeric instability-facial anomalies syndrome 1 (ortholog); oligospermia (ortholog); FOUND IN axon (ortholog); midbody (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: kinesin-like protein KIF3B; LOC100973973; LOC117978233; LOC117978382; LOC117978439
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22137,969,880 - 38,026,975 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12037,962,979 - 38,020,074 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02028,566,710 - 28,605,550 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12029,727,021 - 29,750,223 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2029,727,021 - 29,750,218 (+)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
KIF3B
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22137,969,880 - 38,026,975 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12037,962,979 - 38,020,074 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02028,566,710 - 28,605,550 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12029,727,021 - 29,750,223 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2029,727,021 - 29,750,218 (+)Ensemblpanpan1.1panPan2
KIF3B
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382032,277,651 - 32,335,011 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2032,277,651 - 32,335,011 (+)EnsemblGRCh38hg38GRCh38
GRCh372030,865,454 - 30,922,814 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362030,329,128 - 30,386,475 (+)NCBINCBI36Build 36hg18NCBI36
Build 342030,329,127 - 30,386,470NCBI
Celera2027,621,777 - 27,678,845 (+)NCBICelera
Cytogenetic Map20q11.21NCBI
HuRef2027,653,055 - 27,711,242 (+)NCBIHuRef
CHM1_12030,769,227 - 30,827,250 (+)NCBICHM1_1
T2T-CHM13v2.02034,001,508 - 34,059,883 (+)NCBIT2T-CHM13v2.0
Kif3b
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392153,132,028 - 153,175,310 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2153,133,333 - 153,175,310 (+)EnsemblGRCm39 Ensembl
GRCm382153,291,395 - 153,333,390 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2153,291,413 - 153,333,390 (+)EnsemblGRCm38mm10GRCm38
MGSCv372153,117,152 - 153,159,126 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv362152,982,870 - 153,023,655 (+)NCBIMGSCv36mm8
Celera2159,118,383 - 159,173,625 (+)NCBICelera
Cytogenetic Map2H1NCBI
cM Map275.41NCBI
Kif3b
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83162,218,621 - 162,258,191 (+)NCBIGRCr8
mRatBN7.23141,758,466 - 141,798,012 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3141,758,466 - 141,797,963 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx3145,660,861 - 145,700,355 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03154,244,665 - 154,284,156 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03151,985,380 - 152,024,806 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.03148,772,937 - 148,813,342 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3148,773,259 - 148,813,293 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03155,284,567 - 155,324,361 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43143,642,175 - 143,681,902 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.13143,547,821 - 143,587,573 (+)NCBI
Celera3140,504,639 - 140,544,329 (+)NCBICelera
Cytogenetic Map3q41NCBI
Kif3b
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542228,738,572 - 28,780,112 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495542228,738,567 - 28,779,584 (-)NCBIChiLan1.0ChiLan1.0
KIF3B
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12421,661,730 - 21,706,839 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2421,661,059 - 21,802,815 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2421,309,537 - 21,354,399 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02422,350,430 - 22,395,357 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2422,350,378 - 22,395,357 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12421,628,854 - 21,659,087 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02421,734,375 - 21,779,424 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02422,165,013 - 22,210,036 (+)NCBIUU_Cfam_GSD_1.0
Kif3b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640170,749,389 - 170,764,166 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493648519,180,571 - 19,198,429 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493648519,180,751 - 19,198,321 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
KIF3B
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1735,914,246 - 35,961,522 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11735,914,214 - 35,962,332 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
KIF3B
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1236,655,957 - 36,711,292 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl236,687,168 - 36,711,925 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605090,198,770 - 90,255,540 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Kif3b
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624741270,834 - 314,949 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


RefSeq Acc Id: ENSPPAT00000049130   ⟹   ENSPPAP00000026297
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl2029,727,021 - 29,750,218 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000049137   ⟹   ENSPPAP00000026304
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl2029,727,088 - 29,746,546 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000049142   ⟹   ENSPPAP00000026309
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl2029,727,088 - 29,731,809 (+)Ensembl
RefSeq Acc Id: XM_055104469   ⟹   XP_054960444
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22137,969,880 - 38,026,975 (+)NCBI
NHGRI_mPanPan12037,962,979 - 38,020,074 (+)NCBI
Protein Sequences
Protein RefSeqs XP_054960444 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000026297.1
  ENSPPAP00000026304.1
  ENSPPAP00000026309.1
RefSeq Acc Id: ENSPPAP00000026297   ⟸   ENSPPAT00000049130
RefSeq Acc Id: ENSPPAP00000026304   ⟸   ENSPPAT00000049137
RefSeq Acc Id: ENSPPAP00000026309   ⟸   ENSPPAT00000049142
RefSeq Acc Id: XP_054960444   ⟸   XM_055104469
- UniProtKB: A0A2R9BB24 (UniProtKB/TrEMBL)
Protein Domains
Kinesin motor


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000036252 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000049130.1 UniProtKB/TrEMBL
  ENSPPAT00000049137.1 UniProtKB/TrEMBL
  ENSPPAT00000049142.1 UniProtKB/TrEMBL
Gene3D-CATH 3.40.850.10 UniProtKB/TrEMBL
InterPro Kinesin-like_fam UniProtKB/TrEMBL
  Kinesin_motor_CS UniProtKB/TrEMBL
  Kinesin_motor_dom UniProtKB/TrEMBL
  Kinesin_motor_dom_sf UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/TrEMBL
NCBI Gene KIF3B ENTREZGENE
PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED UniProtKB/TrEMBL
  KINESIN-LIKE PROTEIN UniProtKB/TrEMBL
Pfam Kinesin UniProtKB/TrEMBL
PRINTS KINESINHEAVY UniProtKB/TrEMBL
PROSITE KINESIN_MOTOR_1 UniProtKB/TrEMBL
  KINESIN_MOTOR_2 UniProtKB/TrEMBL
SMART KISc UniProtKB/TrEMBL
Superfamily-SCOP SSF52540 UniProtKB/TrEMBL
UniProt A0A2R9B9N3_PANPA UniProtKB/TrEMBL
  A0A2R9B9P4_PANPA UniProtKB/TrEMBL
  A0A2R9BB24 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2023-04-25 KIF3B  kinesin family member 3B  LOC100973973  kinesin-like protein KIF3B  Symbol and/or name change 5135510 APPROVED
2023-04-20 LOC100973973  kinesin-like protein KIF3B  KIF3B  kinesin family member 3B  Data merged from RGD:32731134 737654 PROVISIONAL
2023-04-20 LOC100973973  kinesin-like protein KIF3B  LOC117978439  kinesin-like protein KIF3B  Data merged from RGD:32733193 737654 PROVISIONAL
2023-04-20 LOC100973973  kinesin-like protein KIF3B  LOC117978382  kinesin-like protein KIF3B  Data merged from RGD:32727282 737654 PROVISIONAL
2023-04-20 LOC100973973  kinesin-like protein KIF3B  LOC117978233  kinesin-like protein KIF3B  Data merged from RGD:32728780 737654 PROVISIONAL
2020-07-01 LOC100973973  kinesin-like protein KIF3B  KIF3B  kinesin family member 3B  Symbol and/or name change 5135510 APPROVED