NDUFB7 (NADH:ubiquinone oxidoreductase subunit B7) - Rat Genome Database

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Gene: NDUFB7 (NADH:ubiquinone oxidoreductase subunit B7) Pan paniscus
Analyze
Symbol: NDUFB7
Name: NADH:ubiquinone oxidoreductase subunit B7
RGD ID: 11717190
Description: ENCODES a protein that exhibits NADH dehydrogenase (ubiquinone) activity (inferred); INVOLVED IN mitochondrial respiratory chain complex I assembly (inferred); transmembrane transport (inferred); ASSOCIATED WITH depressive disorder (ortholog); genetic disease (ortholog); mitochondrial metabolism disease (ortholog); FOUND IN mitochondrial respiratory chain complex I (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22019,495,531 - 19,501,558 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11918,497,747 - 18,503,747 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01914,129,123 - 14,135,129 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11914,972,882 - 14,978,730 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1914,972,882 - 14,978,730 (-)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
NDUFB7
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22019,495,531 - 19,501,558 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11918,497,747 - 18,503,747 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01914,129,123 - 14,135,129 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11914,972,882 - 14,978,730 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1914,972,882 - 14,978,730 (-)Ensemblpanpan1.1panPan2
NDUFB7
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381914,566,078 - 14,572,066 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1914,566,078 - 14,572,066 (-)EnsemblGRCh38hg38GRCh38
GRCh371914,676,890 - 14,682,878 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361914,537,890 - 14,543,886 (-)NCBINCBI36Build 36hg18NCBI36
Build 341914,537,890 - 14,543,886NCBI
Celera1914,568,834 - 14,574,833 (-)NCBICelera
Cytogenetic Map19p13.12NCBI
HuRef1914,246,376 - 14,252,432 (-)NCBIHuRef
CHM1_11914,677,719 - 14,683,723 (-)NCBICHM1_1
T2T-CHM13v2.01914,692,819 - 14,698,809 (-)NCBIT2T-CHM13v2.0
Ndufb7
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39884,293,387 - 84,298,252 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl884,293,300 - 84,298,255 (+)EnsemblGRCm39 Ensembl
GRCm38883,566,758 - 83,571,623 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl883,566,671 - 83,571,626 (+)EnsemblGRCm38mm10GRCm38
MGSCv37886,090,657 - 86,095,522 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36886,456,863 - 86,461,728 (+)NCBIMGSCv36mm8
Celera887,856,763 - 87,857,558 (+)NCBICelera
Cytogenetic Map8C2NCBI
cM Map840.22NCBI
Ndufb7
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81941,472,953 - 41,477,291 (-)NCBIGRCr8
mRatBN7.21924,568,241 - 24,572,579 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1924,568,241 - 24,572,579 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1931,389,561 - 31,393,899 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01932,043,973 - 32,048,311 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01934,266,607 - 34,270,946 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01924,701,067 - 24,705,405 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1924,701,049 - 24,705,405 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01935,680,097 - 35,684,435 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41926,259,362 - 26,263,700 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11926,264,245 - 26,268,461 (-)NCBI
Celera1924,108,863 - 24,113,201 (-)NCBICelera
Cytogenetic Map19q11NCBI
Ndufb7
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541533,134,474 - 33,143,145 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541533,138,888 - 33,142,663 (-)NCBIChiLan1.0ChiLan1.0
NDUFB7
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12048,090,740 - 48,094,823 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2048,090,775 - 48,094,819 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2047,967,433 - 47,971,515 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02048,607,911 - 48,611,993 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2048,607,946 - 48,611,985 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12047,821,904 - 47,825,981 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02048,248,138 - 48,252,205 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02048,491,112 - 48,495,189 (+)NCBIUU_Cfam_GSD_1.0
Ndufb7
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118207,269,964 - 207,273,697 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366593,079,365 - 3,084,788 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366593,081,009 - 3,084,737 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NDUFB7
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl264,718,906 - 64,723,627 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1264,718,892 - 64,723,631 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2265,191,266 - 65,191,951 (-)NCBISscrofa10.2Sscrofa10.2susScr3
NDUFB7
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1613,225,005 - 13,230,650 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl613,225,006 - 13,230,630 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660746,424,439 - 6,430,083 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ndufb7
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046249011,668,618 - 1,672,296 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046249011,668,619 - 1,672,275 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_003807078 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JARIFH020000020 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSPPAT00000065700   ⟹   ENSPPAP00000042769
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1914,972,882 - 14,978,730 (-)Ensembl
RefSeq Acc Id: XM_003807078   ⟹   XP_003807126
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22019,495,531 - 19,501,558 (-)NCBI
NHGRI_mPanPan11918,497,747 - 18,503,747 (-)NCBI
Mhudiblu_PPA_v01914,129,123 - 14,135,129 (-)NCBI
PanPan1.11914,972,882 - 14,978,730 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_003807126 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000042769
  ENSPPAP00000042769.1
Reference Protein Sequences
RefSeq Acc Id: XP_003807126   ⟸   XM_003807078
- UniProtKB: A0A2R9CLC2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSPPAP00000042769   ⟸   ENSPPAT00000065700


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000043940 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000065700.1 UniProtKB/TrEMBL
InterPro NDUB7 UniProtKB/TrEMBL
KEGG Report pps:100972531 UniProtKB/TrEMBL
NCBI Gene NDUFB7 ENTREZGENE
PANTHER NADH DEHYDROGENASE [UBIQUINONE] 1 BETA SUBCOMPLEX SUBUNIT 7 UniProtKB/TrEMBL
  PTHR20900 UniProtKB/TrEMBL
Pfam NDUF_B7 UniProtKB/TrEMBL
PROSITE CHCH UniProtKB/TrEMBL
UniProt A0A2R9CLC2 ENTREZGENE, UniProtKB/TrEMBL