C19H17orf99 (chromosome 19 C17orf99 homolog) - Rat Genome Database

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Gene: C19H17orf99 (chromosome 19 C17orf99 homolog) Pan paniscus
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Symbol: C19H17orf99 (Ensembl: C17orf99)
Name: chromosome 19 C17orf99 homolog (Ensembl:chromosome 17 open reading frame 99)
RGD ID: 11715916
Description: INVOLVED IN mature B cell differentiation involved in immune response (ortholog); positive regulation of immunoglobulin production in mucosal tissue (ortholog); ASSOCIATED WITH genetic disease (ortholog); FOUND IN extracellular space (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: C17H17orf99; chromosome 17 C17orf99 homolog; chromosome 17 open reading frame, human C17orf99; uncharacterized protein C17orf99 homolog
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21994,211,470 - 94,219,179 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11799,039,113 - 99,044,015 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01772,223,073 - 72,244,049 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11777,776,151 - 77,796,139 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1777,776,151 - 77,796,139 (+)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

References

Genomics

Comparative Map Data
C19H17orf99
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21994,211,470 - 94,219,179 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11799,039,113 - 99,044,015 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01772,223,073 - 72,244,049 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11777,776,151 - 77,796,139 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1777,776,151 - 77,796,139 (+)Ensemblpanpan1.1panPan2
C17orf99
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381778,145,571 - 78,166,297 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1778,146,385 - 78,166,297 (+)EnsemblGRCh38hg38GRCh38
GRCh371776,142,466 - 76,162,378 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361776,156,151 - 76,162,364 (+)NCBINCBI36Build 36hg18NCBI36
Celera1772,738,832 - 72,758,765 (+)NCBICelera
Cytogenetic Map17q25.3NCBI
HuRef1771,566,709 - 71,586,521 (+)NCBIHuRef
CHM1_11776,206,987 - 76,226,902 (+)NCBICHM1_1
T2T-CHM13v2.01779,039,349 - 79,060,396 (+)NCBIT2T-CHM13v2.0
6030468B19Rik
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3911117,688,460 - 117,698,134 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl11117,688,486 - 117,698,127 (+)EnsemblGRCm39 Ensembl
GRCm3811117,797,634 - 117,807,308 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl11117,797,660 - 117,807,301 (+)EnsemblGRCm38mm10GRCm38
MGSCv3711117,658,974 - 117,668,622 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3611117,613,750 - 117,623,391 (+)NCBIMGSCv36mm8
Celera11129,541,705 - 129,552,432 (+)NCBICelera
Cytogenetic Map11E2NCBI
cM Map1182.96NCBI
C10h17orf99
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr810103,514,067 - 103,526,132 (+)NCBIGRCr8
mRatBN7.210103,015,371 - 103,027,407 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl10103,016,505 - 103,027,407 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.010106,800,040 - 106,810,153 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl10106,800,142 - 106,809,239 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.010106,441,143 - 106,449,835 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera10101,576,765 - 101,587,314 (+)NCBICelera
Cytogenetic Map10q32.2NCBI
CUNH17orf99
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049555064,397,221 - 4,408,645 (-)NCBIChiLan1.0ChiLan1.0
C9H17orf99
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.192,977,401 - 2,987,450 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl92,976,893 - 2,987,564 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha93,660,848 - 3,670,792 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.093,655,241 - 3,665,198 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl93,655,760 - 3,665,205 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.193,678,251 - 3,688,175 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.093,802,459 - 3,812,417 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.093,883,872 - 3,893,869 (-)NCBIUU_Cfam_GSD_1.0
CUNH17orf99
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11670,172,850 - 70,178,358 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366607741,281,810 - 41,287,209 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
CUNH17orf99
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248017,668,551 - 7,678,531 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSPPAT00000050237   ⟹   ENSPPAP00000027397
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1777,776,151 - 77,796,139 (+)Ensembl
RefSeq Acc Id: XM_063598795   ⟹   XP_063454865
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21994,211,470 - 94,219,179 (+)NCBI
Protein Sequences
Protein RefSeqs XP_063454865 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000027397.1
Reference Protein Sequences
RefSeq Acc Id: ENSPPAP00000027397   ⟸   ENSPPAT00000050237
RefSeq Acc Id: XP_063454865   ⟸   XM_063598795
Protein Domains
IL-40-like Ig


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000036772 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000050237.1 UniProtKB/TrEMBL
InterPro Ig_C17orf99 UniProtKB/TrEMBL
NCBI Gene C17H17orf99 ENTREZGENE
Pfam Ig_C17orf99 UniProtKB/TrEMBL
UniProt A0A2R9BDY4_PANPA UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2024-03-13 C19H17orf99  chromosome 19 C17orf99 homolog  C17H17orf99  chromosome 17 C17orf99 homolog  Symbol and/or name change 5135510 APPROVED
2018-05-08 C17H17orf99  chromosome 17 C17orf99 homolog    chromosome 17 open reading frame, human C17orf99  Symbol and/or name change 5135510 APPROVED