SLC2A4 (solute carrier family 2 member 4) - Rat Genome Database

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Gene: SLC2A4 (solute carrier family 2 member 4) Pan paniscus
Analyze
Symbol: SLC2A4
Name: solute carrier family 2 member 4
RGD ID: 11715388
Description: ENCODES a protein that exhibits D-glucose transmembrane transporter activity (ortholog); glucose transmembrane transporter activity (ortholog); INVOLVED IN amylopectin biosynthetic process (ortholog); brown fat cell differentiation (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN facilitative sugar transporter mediated glucose transport pathway; insulin responsive facilitative sugar transporter mediated glucose transport pathway; insulin signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Cardiomegaly (ortholog); common variable immunodeficiency (ortholog); FOUND IN cell surface (ortholog); clathrin-coated pit (ortholog); clathrin-coated vesicle (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: solute carrier family 2, facilitated glucose transporter member 4
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1177,299,966 - 7,306,344 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl177,299,966 - 7,306,344 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0177,312,605 - 7,319,430 (+)NCBIMhudiblu_PPA_v0panPan3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Function

References

Genomics

Comparative Map Data
SLC2A4
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1177,299,966 - 7,306,344 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl177,299,966 - 7,306,344 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0177,312,605 - 7,319,430 (+)NCBIMhudiblu_PPA_v0panPan3
SLC2A4
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl177,281,718 - 7,288,257 (+)EnsemblGRCh38hg38GRCh38
GRCh38177,281,718 - 7,288,257 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh37177,185,037 - 7,191,576 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36177,125,778 - 7,132,091 (+)NCBINCBI36hg18NCBI36
Build 34177,125,834 - 7,131,125NCBI
Celera177,209,701 - 7,216,014 (+)NCBI
Cytogenetic Map17p13.1NCBI
HuRef177,076,412 - 7,082,727 (+)NCBIHuRef
CHM1_1177,193,837 - 7,200,150 (+)NCBICHM1_1
Slc2a4
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391169,833,112 - 69,839,040 (-)NCBIGRCm39mm39
GRCm39 Ensembl1169,833,365 - 69,839,014 (-)Ensembl
GRCm381169,942,286 - 69,948,216 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1169,942,539 - 69,948,188 (-)EnsemblGRCm38mm10GRCm38
MGSCv371169,755,788 - 69,761,692 (-)NCBIGRCm37mm9NCBIm37
MGSCv361169,758,738 - 69,764,329 (-)NCBImm8
Celera1177,490,257 - 77,496,161 (-)NCBICelera
Cytogenetic Map11B3NCBI
cM Map1142.93NCBI
Slc2a4
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21054,666,015 - 54,671,581 (-)NCBImRatBN7.2
mRatBN7.2 Ensembl1054,666,015 - 54,671,565 (-)Ensembl
Rnor_6.01056,552,921 - 56,558,562 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1056,552,983 - 56,558,487 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01056,298,102 - 56,303,687 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41056,786,705 - 56,792,209 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11056,800,327 - 56,805,832 (-)NCBI
Celera1053,819,953 - 53,825,446 (-)NCBICelera
Cytogenetic Map10q24NCBI
Slc2a4
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554679,630,304 - 9,636,005 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554679,630,304 - 9,636,005 (-)NCBIChiLan1.0ChiLan1.0
SLC2A4
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1532,238,095 - 32,244,022 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl532,238,095 - 32,244,021 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha532,376,140 - 32,382,065 (+)NCBI
ROS_Cfam_1.0532,343,488 - 32,349,420 (+)NCBI
UMICH_Zoey_3.1532,308,943 - 32,314,868 (+)NCBI
UNSW_CanFamBas_1.0532,267,746 - 32,273,663 (+)NCBI
UU_Cfam_GSD_1.0532,444,733 - 32,450,658 (+)NCBI
Slc2a4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560247,093,063 - 47,099,869 (+)NCBI
SpeTri2.0NW_004936595567,267 - 574,051 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SLC2A4
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1252,628,450 - 52,634,967 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11252,628,746 - 52,634,965 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21254,810,360 - 54,816,580 (-)NCBISscrofa10.2Sscrofa10.2susScr3
SLC2A4
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1166,654,626 - 6,660,640 (+)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl166,654,608 - 6,661,495 (+)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366605914,750,453 - 14,756,535 (-)NCBIVero_WHO_p1.0
Slc2a4
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247869,903,176 - 9,908,953 (+)NCBIHetGla_female_1.0hetGla2


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_003810103 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide SSBP01000268 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSPPAT00000004979   ⟹   ENSPPAP00000001068
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl177,299,966 - 7,306,344 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000005020   ⟹   ENSPPAP00000001075
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl177,300,234 - 7,302,830 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000005088   ⟹   ENSPPAP00000001084
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl177,300,726 - 7,304,266 (+)Ensembl
RefSeq Acc Id: XM_003810103   ⟹   XP_003810151
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1177,299,966 - 7,306,344 (+)NCBI
Mhudiblu_PPA_v0177,312,605 - 7,319,430 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_003810151 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_003810151   ⟸   XM_003810103
- Sequence:
RefSeq Acc Id: ENSPPAP00000001075   ⟸   ENSPPAT00000005020
RefSeq Acc Id: ENSPPAP00000001084   ⟸   ENSPPAT00000005088
RefSeq Acc Id: ENSPPAP00000001068   ⟸   ENSPPAT00000004979


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000003711 Ensembl, ENTREZGENE
NCBI Gene SLC2A4 ENTREZGENE