PLIN5 (perilipin 5) - Rat Genome Database

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Gene: PLIN5 (perilipin 5) Pan paniscus
Analyze
Symbol: PLIN5
Name: perilipin 5
RGD ID: 11714292
Description: ENCODES a protein that exhibits identical protein binding (ortholog); lipase binding (ortholog); INVOLVED IN lipid droplet organization (ortholog); lipid storage (ortholog); mitochondrion localization (ortholog); ASSOCIATED WITH amenorrhea (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); intracellular membrane-bounded organelle (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: perilipin-5
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2208,917,017 - 8,929,816 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1198,146,807 - 8,159,602 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0193,542,675 - 3,555,611 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1194,496,475 - 4,502,936 (-)NCBIpanpan1.1PanPan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
PLIN5
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2208,917,017 - 8,929,816 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1198,146,807 - 8,159,602 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0193,542,675 - 3,555,611 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1194,496,475 - 4,502,936 (-)NCBIpanpan1.1PanPan1.1panPan2
PLIN5
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38194,522,531 - 4,535,224 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl194,522,531 - 4,535,224 (-)EnsemblGRCh38hg38GRCh38
GRCh37194,522,543 - 4,535,236 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36194,473,543 - 4,486,208 (-)NCBINCBI36Build 36hg18NCBI36
Celera194,461,329 - 4,473,994 (-)NCBICelera
Cytogenetic Map19p13.3NCBI
HuRef194,284,194 - 4,296,925 (-)NCBIHuRef
CHM1_1194,522,721 - 4,535,399 (-)NCBICHM1_1
T2T-CHM13v2.0194,506,212 - 4,518,891 (-)NCBIT2T-CHM13v2.0
Plin5
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391756,418,601 - 56,424,606 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1756,418,601 - 56,424,596 (-)EnsemblGRCm39 Ensembl
GRCm381756,111,597 - 56,117,606 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1756,111,601 - 56,117,596 (-)EnsemblGRCm38mm10GRCm38
MGSCv371756,251,024 - 56,256,971 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361755,704,894 - 55,710,821 (-)NCBIMGSCv36mm8
Celera1759,530,262 - 59,536,209 (-)NCBICelera
Cytogenetic Map17DNCBI
cM Map1729.16NCBI
Plin5
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr891,026,910 - 1,033,352 (-)NCBIGRCr8
mRatBN7.29939,745 - 946,188 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl9939,747 - 946,120 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx91,386,151 - 1,392,516 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.096,733,424 - 6,739,795 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.095,691,188 - 5,697,553 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0910,956,013 - 10,961,782 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl910,956,056 - 10,961,782 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.099,943,003 - 9,948,729 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera97,561,527 - 7,567,886 (+)NCBICelera
Cytogenetic Map9q11NCBI
Plin5
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554954,407,246 - 4,416,848 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554954,406,590 - 4,414,783 (+)NCBIChiLan1.0ChiLan1.0
PLIN5
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12055,181,171 - 55,189,369 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2055,181,198 - 55,189,366 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2054,909,690 - 54,917,493 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02055,839,605 - 55,847,423 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2055,839,463 - 55,847,422 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12054,901,592 - 54,909,392 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02055,382,123 - 55,389,929 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02055,580,396 - 55,588,202 (+)NCBIUU_Cfam_GSD_1.0
Plin5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118215,197,457 - 215,205,026 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365882,629,762 - 2,636,983 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365882,629,762 - 2,637,303 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PLIN5
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl274,300,619 - 74,314,315 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1274,304,613 - 74,314,314 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2274,797,979 - 74,806,072 (+)NCBISscrofa10.2Sscrofa10.2susScr3
PLIN5
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.164,251,316 - 4,262,656 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl64,251,751 - 4,261,126 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660813,928,417 - 3,940,329 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Plin5
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248285,207,937 - 5,218,901 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248285,208,060 - 5,218,553 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


RefSeq Acc Id: XM_034946522   ⟹   XP_034802413
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2208,917,017 - 8,929,816 (-)NCBI
NHGRI_mPanPan1198,146,807 - 8,159,602 (-)NCBI
Mhudiblu_PPA_v0193,542,675 - 3,555,609 (-)NCBI
RefSeq Acc Id: XM_055104301   ⟹   XP_054960276
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2208,917,017 - 8,924,167 (-)NCBI
NHGRI_mPanPan1198,146,807 - 8,153,931 (-)NCBI
Protein Sequences
Protein RefSeqs XP_034802413 (Get FASTA)   NCBI Sequence Viewer  
  XP_054960276 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_034802413   ⟸   XM_034946522
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054960276   ⟸   XM_055104301
- Peptide Label: isoform X2


Additional Information

Database Acc Id Source(s)
NCBI Gene PLIN5 ENTREZGENE