THTPA (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 15 | 24,986,749 - 24,990,593 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 14 | 24,203,241 - 24,207,085 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 14 | 4,374,439 - 4,378,028 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 14 | 22,467,506 - 22,471,356 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 14 | 22,467,506 - 22,471,356 (+) | Ensembl | panpan1.1 | | panPan2 | |
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THTPA (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 14 | 23,511,760 - 23,560,271 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 14 | 23,555,988 - 23,560,271 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 14 | 23,980,969 - 24,029,480 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 14 | 23,095,071 - 23,098,592 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 14 | 23,095,070 - 23,098,592 | NCBI | | | | | Celera | 14 | 3,887,868 - 3,891,457 (+) | NCBI | | Celera | | | Cytogenetic Map | 14 | q11.2 | NCBI | | | | | HuRef | 14 | 4,097,332 - 4,145,309 (+) | NCBI | | HuRef | | | CHM1_1 | 14 | 23,979,628 - 24,027,450 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 14 | 17,712,320 - 17,760,830 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Thtpa (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 14 | 55,332,241 - 55,336,452 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 14 | 55,332,241 - 55,336,443 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 14 | 55,094,784 - 55,098,995 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 14 | 55,094,784 - 55,098,986 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 14 | 55,713,621 - 55,717,832 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 14 | 54,048,906 - 54,053,053 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 14 | 52,900,681 - 52,904,892 (+) | NCBI | | Celera | | | Cytogenetic Map | 14 | C3 | NCBI | | | | | cM Map | 14 | 28.07 | NCBI | | | | |
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Thtpa (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 15 | 32,536,297 - 32,541,537 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 15 | 28,567,619 - 28,571,580 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 15 | 28,567,323 - 28,571,580 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 15 | 30,413,650 - 30,417,289 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 15 | 31,560,842 - 31,564,481 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 15 | 29,803,502 - 29,807,141 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 15 | 33,755,157 - 33,759,117 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 15 | 33,755,478 - 33,759,115 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 15 | 37,640,608 - 37,646,202 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 15 | 33,201,426 - 33,205,065 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 15 | 33,217,763 - 33,219,293 (+) | NCBI | | | | | Celera | 15 | 28,145,924 - 28,149,563 (+) | NCBI | | Celera | | | Cytogenetic Map | 15 | p13 | NCBI | | | | |
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Thtpa (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955409 | 36,804,258 - 36,808,091 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955409 | 36,803,721 - 36,808,094 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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THTPA (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 8 | 3,781,931 - 3,785,093 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 8 | 3,782,163 - 3,785,394 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 8 | 3,703,805 - 3,708,801 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 8 | 3,892,212 - 3,897,208 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 8 | 3,892,317 - 3,898,687 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 8 | 3,584,212 - 3,588,417 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 8 | 3,644,873 - 3,649,869 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 8 | 3,906,958 - 3,911,954 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Thtpa (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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THTPA (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 7 | 75,545,973 - 75,552,904 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 7 | 75,548,430 - 75,553,721 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 7 | 80,862,681 - 80,867,802 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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THTPA (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 29 | 23,883,363 - 23,930,710 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 29 | 23,926,813 - 23,929,981 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666059 | 22,487,907 - 22,534,963 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Thtpa (Heterocephalus glaber - naked mole-rat) |
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