SEC63 (SEC63 homolog, protein translocation regulator) - Rat Genome Database

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Gene: SEC63 (SEC63 homolog, protein translocation regulator) Pan paniscus
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Symbol: SEC63
Name: SEC63 homolog, protein translocation regulator
RGD ID: 11712073
Description: INVOLVED IN liver development (ortholog); multicellular organism aging (ortholog); nitrogen compound metabolic process (ortholog); ASSOCIATED WITH familial juvenile hyperuricemic nephropathy (ortholog); polycystic kidney disease (ortholog); Polycystic Liver Disease 1 (ortholog); FOUND IN endoplasmic reticulum (ortholog); membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOW QUALITY PROTEIN: translocation protein SEC63 homolog; translocation protein SEC63 homolog
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.16109,536,790 - 109,620,748 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl6109,538,184 - 109,595,518 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v06105,673,265 - 105,757,422 (-)NCBIMhudiblu_PPA_v0panPan3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

Genomics

Comparative Map Data
SEC63
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.16109,536,790 - 109,620,748 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl6109,538,184 - 109,595,518 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v06105,673,265 - 105,757,422 (-)NCBIMhudiblu_PPA_v0panPan3
SEC63
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl6107,867,756 - 107,958,208 (-)EnsemblGRCh38hg38GRCh38
GRCh386107,867,756 - 107,958,208 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh376108,188,960 - 108,279,412 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 366108,298,215 - 108,386,086 (-)NCBINCBI36hg18NCBI36
Build 346108,298,214 - 108,386,086NCBI
Celera6108,935,760 - 109,025,964 (-)NCBI
Cytogenetic Map6q21NCBI
HuRef6105,758,265 - 105,848,248 (-)NCBIHuRef
CHM1_16108,451,504 - 108,542,131 (-)NCBICHM1_1
Sec63
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391042,637,492 - 42,708,510 (+)NCBIGRCm39mm39
GRCm39 Ensembl1042,637,492 - 42,708,510 (+)Ensembl
GRCm381042,761,496 - 42,832,514 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1042,761,496 - 42,832,514 (+)EnsemblGRCm38mm10GRCm38
MGSCv371042,481,302 - 42,552,320 (+)NCBIGRCm37mm9NCBIm37
MGSCv361042,450,141 - 42,517,702 (+)NCBImm8
Celera1043,628,635 - 43,699,289 (+)NCBICelera
Cytogenetic Map10B2NCBI
cM Map1022.89NCBI
Sec63
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.22046,245,101 - 46,314,055 (+)NCBImRatBN7.2
mRatBN7.2 Ensembl2046,245,101 - 46,314,055 (+)Ensembl
Rnor_6.02047,494,270 - 47,563,222 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2047,494,270 - 47,563,222 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02049,156,193 - 49,225,366 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42046,669,125 - 46,738,077 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12046,693,553 - 46,762,289 (+)NCBI
Celera2053,663,315 - 53,732,035 (-)NCBICelera
Cytogenetic Map20q13NCBI
Sec63
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541133,063,989 - 33,126,105 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541133,063,056 - 33,126,325 (-)NCBIChiLan1.0ChiLan1.0
SEC63
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11264,983,442 - 65,028,573 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1264,770,434 - 64,844,883 (-)NCBI
ROS_Cfam_1.01265,829,612 - 65,904,228 (-)NCBI
UMICH_Zoey_3.11265,185,870 - 65,260,323 (-)NCBI
UNSW_CanFamBas_1.01265,031,615 - 65,106,070 (-)NCBI
UU_Cfam_GSD_1.01265,305,260 - 65,379,711 (-)NCBI
Sec63
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494699,904,722 - 99,947,041 (-)NCBI
SpeTri2.0NW_0049365644,182,330 - 4,221,927 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SEC63
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl174,000,684 - 74,078,582 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1174,003,428 - 74,078,605 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2183,274,127 - 83,349,307 (-)NCBISscrofa10.2Sscrofa10.2susScr3
SEC63
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11365,902,796 - 65,993,092 (+)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl1365,902,956 - 65,996,514 (+)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366604038,236,474 - 38,324,301 (+)NCBIVero_WHO_p1.0
Sec63
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462478014,322,651 - 14,405,674 (+)NCBIHetGla_female_1.0hetGla2


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_034962655 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide SSBP01000165 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSPPAT00000012846   ⟹   ENSPPAP00000002703
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl6109,538,184 - 109,595,518 (-)Ensembl
RefSeq Acc Id: XM_034962655   ⟹   XP_034818546
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v06105,673,265 - 105,757,422 (-)NCBI
Protein Sequences
Protein RefSeqs XP_034818546 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_034818546   ⟸   XM_034962655
RefSeq Acc Id: ENSPPAP00000002703   ⟸   ENSPPAT00000012846


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000011744 Ensembl
NCBI Gene SEC63 ENTREZGENE