PRNP (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 21 | 5,641,025 - 5,656,375 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 20 | 5,637,965 - 5,653,199 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 20 | 4,713,616 - 4,728,847 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 20 | 4,523,141 - 4,525,522 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 20 | 4,523,155 - 4,523,916 (+) | Ensembl | panpan1.1 | | panPan2 | |
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PRNP (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 20 | 4,686,456 - 4,701,588 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 20 | 4,686,350 - 4,701,590 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 20 | 4,667,102 - 4,682,234 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 20 | 4,614,797 - 4,630,234 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 20 | 4,615,068 - 4,630,233 | NCBI | | | | | Celera | 20 | 4,736,512 - 4,751,948 (+) | NCBI | | Celera | | | Cytogenetic Map | 20 | p13 | NCBI | | | | | HuRef | 20 | 4,620,194 - 4,635,632 (+) | NCBI | | HuRef | | | CHM1_1 | 20 | 4,667,528 - 4,682,967 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 20 | 4,725,692 - 4,740,800 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Prnp (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 2 | 131,751,848 - 131,780,356 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 2 | 131,751,848 - 131,780,349 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 2 | 131,909,928 - 131,938,436 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 2 | 131,909,928 - 131,938,429 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 2 | 131,735,664 - 131,764,167 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 2 | 131,601,398 - 131,629,868 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 2 | 133,143,177 - 133,164,079 (+) | NCBI | | Celera | | | Cytogenetic Map | 2 | F2 | NCBI | | | | | cM Map | 2 | 64.07 | NCBI | | | | |
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Prnp (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 3 | 139,639,076 - 139,654,420 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 3 | 119,186,073 - 119,201,513 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 3 | 119,177,485 - 119,203,937 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 3 | 123,090,082 - 123,105,437 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 3 | 131,676,802 - 131,692,409 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 3 | 129,346,188 - 129,361,543 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 3 | 124,515,917 - 124,531,320 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 3 | 124,515,978 - 124,531,316 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 3 | 131,009,974 - 131,025,370 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 3 | 119,676,137 - 119,691,507 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 3 | 119,581,709 - 119,597,080 (+) | NCBI | | | | | Celera | 3 | 117,986,209 - 118,001,394 (+) | NCBI | | Celera | | | Cytogenetic Map | 3 | q36 | NCBI | | | | |
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Prnp (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955415 | 15,442,313 - 15,454,644 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955415 | 15,442,313 - 15,454,644 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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PRNP (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 24 | 16,845,224 - 16,862,319 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 24 | 16,846,207 - 16,859,815 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 24 | 16,670,727 - 16,671,500 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 24 | 17,263,379 - 17,280,460 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 24 | 17,263,381 - 17,280,378 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 24 | 16,859,351 - 16,860,124 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 24 | 16,965,836 - 16,966,609 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 24 | 17,299,279 - 17,300,052 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Prnp (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024408640 | 165,673,463 - 165,687,259 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936485 | 14,104,831 - 14,118,629 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936485 | 14,104,829 - 14,118,614 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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PRNP (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 17 | 13,694,190 - 13,705,124 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 17 | 13,694,195 - 13,705,126 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 17 | 14,656,638 - 14,667,625 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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PRNP (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 2 | 33,368,020 - 33,384,556 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 2 | 33,369,629 - 33,370,366 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666071 | 11,150,240 - 11,165,879 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Prnp (Heterocephalus glaber - naked mole-rat) |
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