FAM114A2 (family with sequence similarity 114 member A2) - Rat Genome Database

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Gene: FAM114A2 (family with sequence similarity 114 member A2) Pan paniscus
Analyze
Symbol: FAM114A2
Name: family with sequence similarity 114 member A2
RGD ID: 11710929
Description: ASSOCIATED WITH familial adenomatous polyposis 1 (ortholog); genetic disease (ortholog); Hereditary Neoplastic Syndromes (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v24149,194,787 - 149,245,579 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan15147,334,253 - 147,385,124 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v05149,388,018 - 149,440,434 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.15155,387,688 - 155,438,392 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl5155,387,688 - 155,438,386 (-)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Function

References

Genomics

Comparative Map Data
FAM114A2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v24149,194,787 - 149,245,579 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan15147,334,253 - 147,385,124 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v05149,388,018 - 149,440,434 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.15155,387,688 - 155,438,392 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl5155,387,688 - 155,438,386 (-)Ensemblpanpan1.1panPan2
FAM114A2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh385153,990,148 - 154,038,910 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl5153,990,148 - 154,038,936 (-)EnsemblGRCh38hg38GRCh38
GRCh375153,369,708 - 153,418,470 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 365153,351,456 - 153,398,690 (-)NCBINCBI36Build 36hg18NCBI36
Build 345153,351,458 - 153,398,619NCBI
Celera5149,446,797 - 149,494,029 (-)NCBICelera
Cytogenetic Map5q33.2NCBI
HuRef5148,512,203 - 148,559,437 (-)NCBIHuRef
CHM1_15152,803,876 - 152,851,104 (-)NCBICHM1_1
T2T-CHM13v2.05154,523,283 - 154,572,056 (-)NCBIT2T-CHM13v2.0
Fam114a2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391157,373,816 - 57,409,482 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1157,373,819 - 57,409,443 (-)EnsemblGRCm39 Ensembl
GRCm381157,482,990 - 57,518,656 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1157,482,993 - 57,518,617 (-)EnsemblGRCm38mm10GRCm38
MGSCv371157,296,492 - 57,332,146 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361157,299,195 - 57,334,810 (-)NCBIMGSCv36mm8
Celera1162,234,821 - 62,270,285 (-)NCBICelera
Cytogenetic Map11B1.3NCBI
cM Map1135.27NCBI
Fam114a2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81042,162,295 - 42,197,307 (-)NCBIGRCr8
mRatBN7.21041,661,787 - 41,696,790 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1041,661,787 - 41,696,741 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1046,327,532 - 46,362,395 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01045,817,755 - 45,852,619 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01041,321,383 - 41,356,247 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01042,893,579 - 42,933,041 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1042,894,567 - 42,928,461 (-)NCBIRnor6.0rn6Rnor6.0
Rnor_5.01042,701,557 - 42,738,167 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41043,072,744 - 43,106,230 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11043,086,366 - 43,119,864 (-)NCBI
Celera1040,959,592 - 40,994,576 (-)NCBICelera
Cytogenetic Map10q22NCBI
Fam114a2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554088,397,281 - 8,429,502 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554088,396,185 - 8,434,656 (-)NCBIChiLan1.0ChiLan1.0
FAM114A2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1455,629,241 - 55,662,683 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl455,633,865 - 55,661,487 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha455,520,541 - 55,553,977 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0456,064,021 - 56,097,821 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl456,064,041 - 56,098,751 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1455,893,667 - 55,927,116 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0455,992,803 - 56,026,221 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0456,495,437 - 56,528,886 (+)NCBIUU_Cfam_GSD_1.0
Fam114a2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213110,274,221 - 110,306,725 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365158,727,429 - 8,754,081 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365158,723,580 - 8,756,318 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FAM114A2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1669,121,537 - 69,159,387 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11669,121,515 - 69,159,398 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21675,040,123 - 75,078,047 (+)NCBISscrofa10.2Sscrofa10.2susScr3
FAM114A2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12356,443,108 - 56,495,675 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2356,442,888 - 56,495,642 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603421,168,022 - 21,221,066 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Fam114a2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473335,124,597 - 35,153,089 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473335,119,898 - 35,154,903 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


RefSeq Acc Id: ENSPPAT00000029377   ⟹   ENSPPAP00000007228
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl5155,387,688 - 155,438,386 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000029384   ⟹   ENSPPAP00000007231
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl5155,388,897 - 155,434,096 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000029386   ⟹   ENSPPAP00000007232
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl5155,388,897 - 155,434,096 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000029392   ⟹   ENSPPAP00000007236
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl5155,398,742 - 155,427,386 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000029395   ⟹   ENSPPAP00000007238
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl5155,425,272 - 155,434,096 (-)Ensembl
RefSeq Acc Id: XM_003828970   ⟹   XP_003829018
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v24149,194,787 - 149,245,579 (-)NCBI
NHGRI_mPanPan15147,334,253 - 147,385,124 (-)NCBI
Mhudiblu_PPA_v05149,388,018 - 149,440,434 (-)NCBI
PanPan1.15155,387,688 - 155,438,392 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008954416   ⟹   XP_008952664
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v24149,194,787 - 149,245,536 (-)NCBI
NHGRI_mPanPan15147,334,253 - 147,385,081 (-)NCBI
Mhudiblu_PPA_v05149,388,018 - 149,440,380 (-)NCBI
PanPan1.15155,387,688 - 155,438,390 (-)NCBI
Sequence:
RefSeq Acc Id: XM_034960846   ⟹   XP_034816737
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v24149,194,787 - 149,245,521 (-)NCBI
NHGRI_mPanPan15147,334,253 - 147,385,066 (-)NCBI
Mhudiblu_PPA_v05149,388,018 - 149,440,358 (-)NCBI
RefSeq Acc Id: XM_055112816   ⟹   XP_054968791
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v24149,194,787 - 149,245,568 (-)NCBI
NHGRI_mPanPan15147,334,253 - 147,385,113 (-)NCBI
RefSeq Acc Id: XM_063604276   ⟹   XP_063460346
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v24149,194,787 - 149,244,859 (-)NCBI
RefSeq Acc Id: XP_003829018   ⟸   XM_003828970
- Peptide Label: isoform X1
- UniProtKB: A0A2R8ZRS0 (UniProtKB/TrEMBL),   A0A2R8ZQJ9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008952664   ⟸   XM_008954416
- Peptide Label: isoform X1
- UniProtKB: A0A2R8ZRS0 (UniProtKB/TrEMBL),   A0A2R8ZQJ9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_034816737   ⟸   XM_034960846
- Peptide Label: isoform X2
RefSeq Acc Id: ENSPPAP00000007236   ⟸   ENSPPAT00000029392
RefSeq Acc Id: ENSPPAP00000007238   ⟸   ENSPPAT00000029395
RefSeq Acc Id: ENSPPAP00000007231   ⟸   ENSPPAT00000029384
RefSeq Acc Id: ENSPPAP00000007232   ⟸   ENSPPAT00000029386
RefSeq Acc Id: ENSPPAP00000007228   ⟸   ENSPPAT00000029377
RefSeq Acc Id: XP_054968791   ⟸   XM_055112816
- Peptide Label: isoform X1
- UniProtKB: A0A2R8ZRS0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063460346   ⟸   XM_063604276
- Peptide Label: isoform X1
- UniProtKB: A0A2R8ZRS0 (UniProtKB/TrEMBL)


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000026356 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000029377.1 UniProtKB/TrEMBL
  ENSPPAT00000029384.1 UniProtKB/TrEMBL
  ENSPPAT00000029386.1 UniProtKB/TrEMBL
  ENSPPAT00000029392.1 UniProtKB/TrEMBL
  ENSPPAT00000029395.1 UniProtKB/TrEMBL
InterPro DUF719 UniProtKB/TrEMBL
KEGG Report pps:100982381 UniProtKB/TrEMBL
NCBI Gene FAM114A2 ENTREZGENE
PANTHER PROTEIN FAM114A2 UniProtKB/TrEMBL
  PTHR12842 UniProtKB/TrEMBL
Pfam DUF719 UniProtKB/TrEMBL
UniProt A0A2R8ZQJ9 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R8ZQK2_PANPA UniProtKB/TrEMBL
  A0A2R8ZQK3_PANPA UniProtKB/TrEMBL
  A0A2R8ZRS0 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R8ZRS9_PANPA UniProtKB/TrEMBL