ANKMY2 (ankyrin repeat and MYND domain containing 2) - Rat Genome Database
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Gene: ANKMY2 (ankyrin repeat and MYND domain containing 2) Pan paniscus
Analyze
Symbol: ANKMY2
Name: ankyrin repeat and MYND domain containing 2
RGD ID: 11705247
Description: ENCODES a protein that exhibits enzyme binding (ortholog); ASSOCIATED WITH congenital muscular dystrophy-dystroglycanopathy A7 (ortholog); High Myopia (ortholog); pleomorphic xanthoastrocytoma (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: ankyrin repeat and MYND domain-containing protein 2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1716,581,302 - 16,628,359 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl716,581,308 - 16,628,359 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0717,255,793 - 17,301,997 (-)NCBIMhudiblu_PPA_v0panPan3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Function

References

Genomics

Comparative Map Data
ANKMY2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1716,581,302 - 16,628,359 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl716,581,308 - 16,628,359 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0717,255,793 - 17,301,997 (-)NCBIMhudiblu_PPA_v0panPan3
ANKMY2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl716,599,779 - 16,645,817 (-)EnsemblGRCh38hg38GRCh38
GRCh38716,599,779 - 16,645,816 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37716,639,404 - 16,685,379 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36716,605,937 - 16,651,923 (-)NCBINCBI36hg18NCBI36
Build 34716,412,651 - 16,458,638NCBI
Celera716,619,158 - 16,665,198 (-)NCBI
Cytogenetic Map7p21.1NCBI
HuRef716,526,082 - 16,571,911 (-)NCBIHuRef
CHM1_1716,639,148 - 16,685,165 (-)NCBICHM1_1
CRA_TCAGchr7v2716,692,527 - 16,738,565 (-)NCBI
Ankmy2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391236,207,123 - 36,247,290 (+)NCBIGRCm39mm39
GRCm39 Ensembl1236,207,113 - 36,247,290 (+)Ensembl
GRCm381236,157,124 - 36,197,291 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1236,157,114 - 36,197,291 (+)EnsemblGRCm38mm10GRCm38
MGSCv371236,883,711 - 36,923,878 (+)NCBIGRCm37mm9NCBIm37
MGSCv361236,667,456 - 36,707,557 (+)NCBImm8
Celera1237,611,389 - 37,654,049 (+)NCBICelera
Cytogenetic Map12A3NCBI
Ankmy2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2652,888,963 - 52,930,341 (+)NCBI
Rnor_6.0 Ensembl655,648,021 - 55,689,218 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0655,646,905 - 55,689,223 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0665,261,174 - 65,303,415 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4654,881,681 - 54,923,743 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1654,883,873 - 54,926,014 (+)NCBI
Celera652,031,590 - 52,072,350 (+)NCBICelera
Cytogenetic Map6q16NCBI
Ankmy2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541019,778,736 - 19,813,150 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541019,778,736 - 19,812,731 (-)NCBIChiLan1.0ChiLan1.0
ANKMY2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl1431,118,013 - 31,153,874 (-)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.11431,117,375 - 31,153,916 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Ankmy2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049365463,124,124 - 3,159,701 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ANKMY2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl985,848,002 - 85,887,427 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1985,850,646 - 85,887,450 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
ANKMY2
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12141,470,011 - 41,517,172 (+)NCBI
ChlSab1.1 Ensembl2141,470,033 - 41,517,608 (+)Ensembl
Ankmy2
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462473913,580,903 - 13,615,812 (+)NCBI


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_003825011 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide SSBP01000183 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSPPAT00000064269   ⟹   ENSPPAP00000041343
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl716,581,308 - 16,628,359 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000064274   ⟹   ENSPPAP00000041348
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl716,581,508 - 16,628,115 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000064278   ⟹   ENSPPAP00000041352
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl716,585,172 - 16,628,115 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000064281   ⟹   ENSPPAP00000041355
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl716,627,212 - 16,628,115 (-)Ensembl
RefSeq Acc Id: XM_003825011   ⟹   XP_003825059
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1716,581,302 - 16,628,359 (-)NCBI
Mhudiblu_PPA_v0717,255,793 - 17,301,997 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_003825059 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_003825059   ⟸   XM_003825011
- Sequence:
RefSeq Acc Id: ENSPPAP00000041348   ⟸   ENSPPAT00000064274
RefSeq Acc Id: ENSPPAP00000041352   ⟸   ENSPPAT00000064278
RefSeq Acc Id: ENSPPAP00000041343   ⟸   ENSPPAT00000064269
RefSeq Acc Id: ENSPPAP00000041355   ⟸   ENSPPAT00000064281
Protein Domains
ANK_REP_REGION   MYND-type


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000043278 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSPPAP00000041343 ENTREZGENE, UniProtKB/TrEMBL
  ENSPPAP00000041348 UniProtKB/TrEMBL
  ENSPPAP00000041352 UniProtKB/TrEMBL
  ENSPPAP00000041355 UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000064269 UniProtKB/TrEMBL
  ENSPPAT00000064274 UniProtKB/TrEMBL
  ENSPPAT00000064278 UniProtKB/TrEMBL
  ENSPPAT00000064281 UniProtKB/TrEMBL
Gene3D-CATH 1.25.40.20 UniProtKB/TrEMBL
InterPro Ankyrin_rpt UniProtKB/TrEMBL
  Ankyrin_rpt-contain_dom UniProtKB/TrEMBL
  Ankyrin_rpt-contain_sf UniProtKB/TrEMBL
  Znf_MYND UniProtKB/TrEMBL
KEGG Report pps:100990670 UniProtKB/TrEMBL
NCBI Gene ANKMY2 ENTREZGENE
Pfam Ank_2 UniProtKB/TrEMBL
  zf-MYND UniProtKB/TrEMBL
PROSITE ANK_REP_REGION UniProtKB/TrEMBL
  ANK_REPEAT UniProtKB/TrEMBL
  ZF_MYND_1 UniProtKB/TrEMBL
  ZF_MYND_2 UniProtKB/TrEMBL
SMART ANK UniProtKB/TrEMBL
Superfamily-SCOP SSF48403 UniProtKB/TrEMBL
UniProt A0A2R9CHB6_PANPA UniProtKB/TrEMBL
  A0A2R9CK16_PANPA UniProtKB/TrEMBL
  A0A2R9CK23_PANPA UniProtKB/TrEMBL
  A0A2R9CR31_PANPA UniProtKB/TrEMBL