MTARC1 (mitochondrial amidoxime reducing component 1)

	Submit Data \| Help \| Video Tutorials \| News \| Publications \| Download \| REST API \| Citing RGD \| Contact
	Search RGD Grant Resources Citing RGD About Us Contact Us Genes QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data OntoMate (Literature Search) JBrowse (Genome Browser) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) RatMine GViewer (Genome Viewer) Overgo Probe Designer VCMap Aging & Age-Related Disease Cancer Cardiovascular Disease COVID-19 Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease Find Models new Genetic Models Autism Models PhenoMiner (Quantitative Phenotypes) Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive Pathways Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Poster Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
	Advanced Search (OLGA)

Gene: MTARC1 (mitochondrial amidoxime reducing component 1) Pan paniscus

Analyze

Symbol:

MTARC1

Name:

mitochondrial amidoxime reducing component 1

RGD ID:

11697410

Description:

ENCODES a protein that exhibits molybdenum ion binding (ortholog); molybdopterin cofactor binding (ortholog); nitrate reductase activity (ortholog); INVOLVED IN cellular detoxification of nitrogen compound (ortholog); nitrate metabolic process (ortholog); nitric oxide biosynthetic process (ortholog); ASSOCIATED WITH amphetamine abuse (ortholog); gastrointestinal stromal tumor (ortholog); Loeys-Dietz syndrome 4 (ortholog); FOUND IN mitochondrion (ortholog); nitric-oxide synthase complex (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

MARC1; mitochondrial amidoxime-reducing component 1

RGD Orthologs

Human

Mouse

Rat

Dog

Squirrel

Pig

Green Monkey

Naked Mole-Rat

Alliance Genes

More Info

more info ...

Latest Assembly:

Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly

Position:

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
PanPan1.1	1	201,407,483 - 201,435,186 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
Mhudiblu_PPA_v0	1	196,373,028 - 196,405,115 (+)	NCBI	Mhudiblu_PPA_v0		panPan3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

amphetamine abuse (ISO)

gastrointestinal stromal tumor (ISO)

Loeys-Dietz syndrome 4 (ISO)

parathyroid carcinoma (ISO)

Usher syndrome (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cellular detoxification of nitrogen compound (ISO)

nitrate metabolic process (ISO)

nitric oxide biosynthetic process (ISO)

Cellular Component

mitochondrion (ISO)

nitric-oxide synthase complex (ISO)

Molecular Function

molybdenum ion binding (ISO)

molybdopterin cofactor binding (ISO)

nitrate reductase activity (ISO)

nitrite reductase (NO-forming) activity (ISO)

nitrite reductase activity (ISO)

oxidoreductase activity, acting on other nitrogenous compounds as donors (ISO)

protein binding (ISO)

References

Genomics

Comparative Map Data

MTARC1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
PanPan1.1	1	201,407,483 - 201,435,186 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
Mhudiblu_PPA_v0	1	196,373,028 - 196,405,115 (+)	NCBI	Mhudiblu_PPA_v0		panPan3

MTARC1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	220,786,913 - 220,819,659 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p13 Ensembl	1	220,786,352 - 220,819,659 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	220,960,255 - 220,993,001 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	219,026,894 - 219,054,353 (+)	NCBI	NCBI36		hg18	NCBI36
Celera	1	194,179,397 - 194,207,116 (+)	NCBI
Cytogenetic Map	1	q41	NCBI
HuRef	1	191,634,656 - 191,662,358 (+)	NCBI		HuRef
CHM1_1	1	222,232,498 - 222,260,205 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	1	220,026,620 - 220,059,373 (+)	NCBI

Mtarc1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	184,518,964 - 184,543,622 (-)	NCBI	GRCm39		mm39
GRCm39 Ensembl	1	184,518,964 - 184,543,510 (-)	Ensembl
GRCm38	1	184,786,767 - 184,811,743 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	184,786,767 - 184,811,313 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	1	186,610,646 - 186,635,192 (-)	NCBI	GRCm37		mm9	NCBIm37
MGSCv36	1	186,487,555 - 186,512,101 (-)	NCBI			mm8
Celera	1	191,748,956 - 191,773,778 (-)	NCBI		Celera
Cytogenetic Map	1	H5	NCBI

Mtarc1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	13	96,324,377 - 96,362,677 (-)	NCBI	mRatBN7.2
mRatBN7.2 Ensembl	13	96,339,757 - 96,397,796 (-)	Ensembl
Rnor_6.0	13	102,693,679 - 102,724,120 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	13	102,698,546 - 102,721,218 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	13	107,375,873 - 107,398,500 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	13	100,747,272 - 100,806,258 (-)	NCBI	RGSC3.4		rn4	RGSC3.4
Celera	13	95,859,205 - 95,880,141 (-)	NCBI		Celera
Cytogenetic Map	13	q26	NCBI

MTARC1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	38	15,460,548 - 15,490,941 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	38	15,463,548 - 15,532,241 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	38	15,501,865 - 15,532,434 (+)	NCBI
ROS_Cfam_1.0	38	15,496,387 - 15,527,068 (+)	NCBI
UMICH_Zoey_3.1	38	15,503,851 - 15,534,357 (+)	NCBI
UNSW_CanFamBas_1.0	38	15,858,250 - 15,883,444 (+)	NCBI
UU_Cfam_GSD_1.0	38	16,151,276 - 16,181,816 (+)	NCBI

Mtarc1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	56,229,847 - 56,255,778 (-)	NCBI
SpeTri2.0	NW_004936650	1,477,138 - 1,504,501 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

MTARC1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1	10	10,190,759 - 10,264,467 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	10	12,257,867 - 12,288,355 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

MTARC1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	25	8,654,316 - 8,744,579 (-)	NCBI	ChlSab1.1		chlSab2
Vero_WHO_p1.0	NW_023666055	9,000,217 - 9,029,492 (-)	NCBI	Vero_WHO_p1.0

Mtarc1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624835	4,164,755 - 4,177,931 (+)	NCBI	HetGla_female_1.0		hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_003807175	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034947205	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034947213	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	SSBP01000343	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Reference Sequences

RefSeq Acc Id:

XM_003807175 ⟹ XP_003807223

RefSeq Status:

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1	1	201,407,483 - 201,435,186 (+)	NCBI
Mhudiblu_PPA_v0	1	196,373,041 - 196,405,115 (+)	NCBI

Sequence:

show sequence

ACAGCGCCCTGCAGCGCAGGCGACGGAAGGTTGCAGAGGCAGTGGGGCGCCGACCACGTGGAAG
CTGAGCCACCACCTCCCACTCCCCGCGCCGCCCCCAGAAGGACGCACTGCTCTGATTGGCCCGG
AAGGGTTCAGGAGCTGCCCACCCTTTGGGCTCGGGGCCAAAGGCCGCACCTTCCCCTAGCGGCC
CCGGGCGACCAGCGCGCTCCGGCCTTGCCGCCGCCACCTCGCGGAGAAGCCAGCCAAGGGCGCC
GCCGGCTCCTCCTCGCTGGCGCGCTTTGTCCTCCTCGCGCAATCCCGGCCCGGGTGGCTCGGGG
TCGCCGCGCTGGGCCTGACCGCGGTGGCGCTGGGGGCTGTTGCCTGGCGCCGCGCATGGCCCAC
GCGGCGCCGGCGGCTGCTGCAGCAGGTGGGCACCGTGGCGCAGCTCTGGATCTACCCTGTGAAA
TCCTGCAAGGGGGTGCCGGTGAGCGAGGCGGAGTGCACGGCCATGGGGCTGCGCAGCGGCAACC
TGCGGGACAGGTTTTGGCTTGTGATCAACCAGGAGGGAAACATGGTTACTGCTCGCCAGGAACC
TCGCCTGGTCCTGATTTCCCTGACCTGCGATGGTGACACCCTGACTCTCAGTGCAGCCTACACA
AAGGACCTACTACTGCCTATCAAAACACCCACCACAAATGCAGTGCACAGGTGCAGAGTGCACG
GCCTGGAGATAGAGGGCAGGGACTGTGGCGAGGCCGCCGCCCAGTGGATAACCAGCTTCCTGAA
GTCACAGCCCTACCGCCTGGTGCACTTCGAGCCTCACATGCGACCGAGACGTCCTCATCAAATA
GCAGACTTGTTCCGACCCAAGGACCAGATTGCTTACTCAGACACCAGCCCATTCTTGATCCTTT
CTGAGGCGTCGCTGGCGGATCTCAACTCCAGGCTCGAGAAGAAAGTTAAAGCAACCAACTTCAG
GCCCAATATTGTAATTTCAGGATGCGATGTCTATGCAGAGGATTCTTGGGATGAGCTTCTTATT
GGTGACGTGGAACTGAAAAGGGTGATGGCTTGTTCCAGATGCATTTTAACCACAGTGGACCCAG
ACACCGGTGTCATGAGCAGGAAGGAACCGCTGGAAACACTGAAGAGTTATCGCCAGTGTGACCC
TTCAGAACGAAAGTTATATGGAAAATCACCACTCTTTGGGCAGTATTTTGTGCTGGAAAACCCA
GGGACCATCAAAGTGGGAGACCCTGTGTACCTGCTGGGCCAGTAATGGGAACCGTATGTCCTGG
AATATTAGACGCCTTTTTAAAATGTTCTCAAAAATGACAACACTTGAAGCATGGTGTTTCAGAA
CTGAGACCTCAACATTTTCTTTAAATTTGTGATTTTCACATTTTTTGTCTTTTGGACTTCTGGT
GTCTCAATGCTTCAATGTCCCAGTGCAAAAAGTAAAGAAATATAGTCTCAATAACTTAGTAGGA
CTTCAGTAAGTCACTTAAATGACAAGACAGGATTCTGAAAACTCCCCGTTTAACTGATTATGGA
ATAGTTCTTTCTCCTGCTTCTCCGTTTATCTACCAAGAGCGCAGACTTGCATCCTGTCACTACC
ACTCGTTAGAGAAAGAGAAGAAGAGAAAGAGGAAGAGTGGGTGGGCTGGAAGAATGTCCTAGAA
TGTGTTATTGCCCCTGTTCATGAGGTACGCAATGAAAATTAAATTGCTCCCCAAATATGGCTGC
AATGCCACTTCCCTTTTCTTCTCAAGTGCCGGGCTAGCTTTTGAAATGGCGTAAAGACTGAGGT
GACCTTCAGGAAGCACTGCAGATATTAATTTTCCATAGATCTGGATCTGGCCCTGCTGCTTCTC
AGACAGCATTGGATTTCCTAAAGGTGCTCAGGATGATGGTTGTGTAGTCATGGAGGACCCCTGG
ATCCTTGCCATTCCCCTCAGCTAATGACGGAGTGCTCCTTCTCCAGTTCCGGGTGAAAAAGTTC
TGAATTCCGTGGAGGAGAAGAAAAGTGATTCAGTGATTTCAGATAGACTACTGAAAACGTTTAA
AGGGGGAAAAGGAAAGCATATGTCAGTTGTTTAAAACCCAATATCTATTTTTTAACTGATTGTA
TAACTCTAAGATCTGATGAAGTATATTTTTTATTGCCATTTTGTCCTTTGATTATATTGGGAAG
TTGACTAAACTTGAAAAATGTTTTTAAAACTGTGAATAAATGGAAGCTACTTTGACTAGTT

hide sequence

RefSeq Acc Id:

XM_034947205 ⟹ XP_034803096

RefSeq Status:

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
Mhudiblu_PPA_v0	1	196,373,034 - 196,400,759 (+)	NCBI

RefSeq Acc Id:

XM_034947213 ⟹ XP_034803104

RefSeq Status:

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
Mhudiblu_PPA_v0	1	196,373,028 - 196,388,750 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_003807223	(Get FASTA)	NCBI Sequence Viewer
	XP_034803096	(Get FASTA)	NCBI Sequence Viewer
	XP_034803104	(Get FASTA)	NCBI Sequence Viewer

Reference Sequences

RefSeq Acc Id:

XP_003807223 ⟸ XM_003807175

- Peptide Label:

isoform X2

- Sequence:

show sequence

MGLRSGNLRDRFWLVINQEGNMVTARQEPRLVLISLTCDGDTLTLSAAYTKDLLLPIKTPTTNA
VHRCRVHGLEIEGRDCGEAAAQWITSFLKSQPYRLVHFEPHMRPRRPHQIADLFRPKDQIAYSD
TSPFLILSEASLADLNSRLEKKVKATNFRPNIVISGCDVYAEDSWDELLIGDVELKRVMACSRC
ILTTVDPDTGVMSRKEPLETLKSYRQCDPSERKLYGKSPLFGQYFVLENPGTIKVGDPVYLLGQ

hide sequence

RefSeq Acc Id:	XP_034803104 ⟸ XM_034947213
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_034803096 ⟸ XM_034947205
- Peptide Label:	isoform X1

Additional Information

External Database Links

Database	Acc Id	Source(s)
NCBI Gene	MARC1	ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2019-10-01	MTARC1	mitochondrial amidoxime reducing component 1	MARC1	mitochondrial amidoxime reducing component 1	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Send us a Message

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD